MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 131297 bp
Accession: NZ_CP029653 Location: 2134435..2265731 Organism: Staphylococcus aureus strain AR_0470 Replicon: chromosome
Accession: NZ_CP029653 Location: 2134435..2265731 Organism: Staphylococcus aureus strain AR_0470 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC55_RS10835 () | 2130396..2131853 | - | 1458 | WP_000027924.1 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA | - |
| CSC55_RS10840 () | 2131855..2132157 | - | 303 | WP_000170162.1 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC | - |
| CSC55_RS10845 () | 2132524..2134062 | + | 1539 | WP_000957023.1 | sodium/proline symporter PutP | - |
| CSC55_RS10850 () | 2134151..2135350 | - | 1200 | WP_000831695.1 | CamS family sex pheromone protein | - |
| CSC55_RS10855 () | 2135363..2137366 | - | 2004 | WP_000774552.1 | NAD-dependent DNA ligase LigA | - |
| CSC55_RS10860 () | 2137370..2139562 | - | 2193 | WP_000992924.1 | DNA helicase PcrA | - |
| CSC55_RS10865 () | 2139559..2140251 | - | 693 | WP_000272063.1 | heptaprenylglyceryl phosphate synthase | - |
| CSC55_RS10870 () | 2140434..2140736 | - | 303 | WP_001165363.1 | hypothetical protein | - |
| CSC55_RS10875 () | 2140845..2142140 | - | 1296 | WP_000572878.1 | adenylosuccinate lyase | - |
| CSC55_RS10880 () | 2142991..2144157 | + | 1167 | WP_000827736.1 | cysteine protease staphopain A | - |
| CSC55_RS10885 () | 2144188..2144511 | + | 324 | WP_000434532.1 | staphostatin A | - |
| CSC55_RS10890 () | 2144805..2144978 | - | 174 | WP_000669861.1 | NETI motif-containing protein | - |
| CSC55_RS10895 () | 2144959..2145561 | - | 603 | WP_000011542.1 | DUF2179 domain-containing protein | - |
| CSC55_RS10900 () | 2145831..2146652 | - | 822 | WP_000040861.1 | ammonia-dependent NAD(+) synthetase | - |
| CSC55_RS10905 () | 2146645..2148114 | - | 1470 | WP_000284434.1 | nicotinate phosphoribosyltransferase | - |
| CSC55_RS10910 () | 2148298..2149374 | + | 1077 | WP_001573806.1 | nitric oxide synthase oxygenase | - |
| CSC55_RS10915 () | 2149394..2150189 | + | 796 | Protein_2033 | prephenate dehydratase | - |
| CSC55_RS10920 () | 2150261..2150368 | + | 108 | WP_031788442.1 | hypothetical protein | - |
| CSC55_RS10925 () | 2150379..2151941 | - | 1563 | WP_000323171.1 | SLC13 family permease | - |
| CSC55_RS10930 () | 2152146..2153243 | - | 1098 | WP_000275719.1 | pectate lyase | - |
| CSC55_RS10935 () | 2153616..2154176 | + | 561 | WP_000149686.1 | cysteine hydrolase | - |
| CSC55_RS10940 () | 2154229..2155158 | + | 930 | WP_001140871.1 | manganese-dependent inorganic pyrophosphatase | - |
| CSC55_RS10945 () | 2155351..2155524 | - | 174 | WP_001790680.1 | hypothetical protein | - |
| CSC55_RS10950 () | 2155576..2156955 | + | 1380 | WP_001021224.1 | aldehyde dehydrogenase | - |
| CSC55_RS10955 () | 2157075..2158103 | - | 1029 | WP_110183858.1 | lactonase family protein | - |
| CSC55_RS15315 () | 2158374..2158511 | + | 138 | WP_001792936.1 | hypothetical protein | - |
| CSC55_RS10960 () | 2158563..2158943 | - | 381 | WP_001284659.1 | penicillinase repressor BlaI | - |
| CSC55_RS10965 () | 2158933..2160690 | - | 1758 | WP_001096371.1 | beta-lactam sensor/signal transducer BlaR1 | - |
| CSC55_RS10970 () | 2160797..2161642 | + | 846 | WP_000733621.1 | penicillin-hydrolyzing class A beta-lactamase BlaZ | - |
| CSC55_RS10975 () | 2161693..2163372 | - | 1680 | WP_052997696.1 | IS1182 family transposase | - |
| CSC55_RS10980 () | 2163861..2164271 | + | 411 | WP_000612780.1 | YolD-like family protein | - |
| CSC55_RS10985 () | 2164300..2164665 | - | 366 | WP_000514485.1 | hypothetical protein | - |
| CSC55_RS10990 () | 2164674..2166737 | - | 2064 | WP_000026855.1 | tyrosine-type recombinase/integrase | - |
| CSC55_RS10995 () | 2166740..2167852 | - | 1113 | WP_110183859.1 | tyrosine-type recombinase/integrase | - |
| CSC55_RS11000 () | 2168037..2168342 | + | 306 | Protein_2051 | YolD-like family protein | - |
| CSC55_RS11005 () | 2168399..2168572 | - | 174 | WP_000267034.1 | hypothetical protein | - |
| CSC55_RS11010 () | 2169023..2170063 | + | 1041 | WP_001188074.1 | linear amide C-N hydrolase | - |
| CSC55_RS11015 () | 2170120..2170962 | - | 843 | WP_000713064.1 | DUF4097 family beta strand repeat protein | - |
| CSC55_RS11020 () | 2170959..2171516 | - | 558 | WP_001033968.1 | DUF1700 domain-containing protein | - |
| CSC55_RS11025 () | 2171576..2172100 | - | 525 | WP_000966288.1 | membrane protein | - |
| CSC55_RS11030 () | 2172221..2172784 | + | 564 | WP_000182842.1 | thioredoxin family protein | - |
| CSC55_RS11035 () | 2172848..2173588 | - | 741 | WP_001221650.1 | phenol-soluble modulin export ABC transporter permease subunit PmtD | - |
| CSC55_RS11040 () | 2173588..2174460 | - | 873 | WP_000763048.1 | phenol-soluble modulin export ABC transporter ATP-binding protein PmtC | - |
| CSC55_RS11045 () | 2174457..2175137 | - | 681 | WP_000645732.1 | phenol-soluble modulin export ABC transporter permease subunit PmtB | - |
| CSC55_RS11050 () | 2175138..2176034 | - | 897 | WP_000991315.1 | phenol-soluble modulin export ABC transporter ATP-binding protein PmtA | - |
| CSC55_RS11055 () | 2176031..2176411 | - | 381 | WP_000691584.1 | GntR family transcriptional regulator | - |
| CSC55_RS11060 () | 2176669..2176845 | - | 177 | WP_000681966.1 | hypothetical protein | - |
| CSC55_RS11065 () | 2177087..2177185 | - | 99 | WP_000990056.1 | hypothetical protein | - |
| CSC55_RS11070 () | 2177385..2178671 | + | 1287 | WP_001068528.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| CSC55_RS11075 () | 2178942..2180681 | - | 1740 | WP_001573801.1 | MAP domain-containing protein | - |
| CSC55_RS11080 () | 2181070..2181317 | + | 248 | Protein_2067 | sphingomyelin phosphodiesterase | - |
| CSC55_RS11085 () | 2181639..2181818 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| CSC55_RS11095 () | 2182129..2182389 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| CSC55_RS11100 () | 2182442..2182792 | - | 351 | WP_000702262.1 | complement inhibitor SCIN-A | - |
| CSC55_RS11105 () | 2183475..2183924 | + | 450 | WP_000727645.1 | chemotaxis-inhibiting protein CHIPS | - |
| CSC55_RS11110 () | 2184019..2184353 | - | 335 | Protein_2072 | SH3 domain-containing protein | - |
| CSC55_RS11125 () | 2185004..2185495 | - | 492 | WP_000920042.1 | staphylokinase | - |
| CSC55_RS11130 () | 2185686..2186441 | - | 756 | WP_000861026.1 | CHAP domain-containing protein | - |
| CSC55_RS11135 () | 2186453..2186707 | - | 255 | WP_000611512.1 | phage holin | - |
| CSC55_RS11140 () | 2186759..2186866 | + | 108 | WP_031762631.1 | hypothetical protein | - |
| - () | 2186788..2186927 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2186788..2186927 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2186788..2186927 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2186788..2186927 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| CSC55_RS11145 () | 2186919..2187095 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| CSC55_RS11150 () | 2187298..2188071 | - | 774 | WP_025174055.1 | staphylococcal enterotoxin type P | - |
| CSC55_RS11155 () | 2188492..2188866 | - | 375 | WP_000340977.1 | hypothetical protein | - |
| CSC55_RS11160 () | 2188922..2189209 | - | 288 | WP_001262621.1 | hypothetical protein | - |
| CSC55_RS11165 () | 2189255..2189407 | - | 153 | WP_001000058.1 | hypothetical protein | - |
| CSC55_RS11170 () | 2189400..2193182 | - | 3783 | WP_001573797.1 | phage minor structural protein | - |
| CSC55_RS11175 () | 2193198..2194682 | - | 1485 | WP_000567408.1 | phage tail family protein | - |
| CSC55_RS11180 () | 2194679..2199208 | - | 4530 | WP_001573795.1 | phage tail tape measure protein | - |
| CSC55_RS11185 () | 2199453..2199803 | - | 351 | WP_001096355.1 | hypothetical protein | - |
| CSC55_RS11190 () | 2199853..2200077 | - | 225 | WP_071621395.1 | Ig-like domain-containing protein | - |
| CSC55_RS11195 () | 2200119..2200763 | - | 645 | WP_000268740.1 | phage tail protein | - |
| CSC55_RS11200 () | 2200764..2201171 | - | 408 | WP_000565498.1 | hypothetical protein | - |
| CSC55_RS11205 () | 2201168..2201572 | - | 405 | WP_000114226.1 | HK97 gp10 family phage protein | - |
| CSC55_RS11210 () | 2201569..2201931 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| CSC55_RS11215 () | 2201915..2202199 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| CSC55_RS11220 () | 2202189..2202473 | - | 285 | WP_000238236.1 | hypothetical protein | - |
| CSC55_RS11225 () | 2202493..2203638 | - | 1146 | WP_001573791.1 | phage major capsid protein | - |
| CSC55_RS11230 () | 2203662..2204399 | - | 738 | WP_000642728.1 | Clp protease ClpP | - |
| CSC55_RS11235 () | 2204383..2205570 | - | 1188 | WP_000025274.1 | phage portal protein | - |
| CSC55_RS11240 () | 2205586..2207247 | - | 1662 | WP_000625088.1 | terminase large subunit | - |
| CSC55_RS11245 () | 2207244..2207588 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| CSC55_RS11250 () | 2207718..2208017 | - | 300 | WP_000988332.1 | HNH endonuclease | - |
| CSC55_RS11255 () | 2208249..2208665 | - | 417 | WP_000590122.1 | hypothetical protein | - |
| CSC55_RS11260 () | 2208693..2208893 | - | 201 | WP_001557462.1 | DUF1514 family protein | - |
| CSC55_RS11265 () | 2208893..2209042 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| CSC55_RS11270 () | 2209039..2209245 | - | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
| CSC55_RS11275 () | 2209242..2209487 | - | 246 | WP_001282077.1 | hypothetical protein | - |
| CSC55_RS11280 () | 2209524..2210060 | - | 537 | WP_000185693.1 | dUTPase | - |
| CSC55_RS11285 () | 2210057..2210302 | - | 246 | WP_001065108.1 | DUF1024 family protein | - |
| CSC55_RS11290 () | 2210317..2210565 | - | 249 | WP_000178986.1 | hypothetical protein | - |
| CSC55_RS11295 () | 2210562..2210819 | - | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| CSC55_RS11300 () | 2210819..2211190 | - | 372 | WP_000101279.1 | hypothetical protein | - |
| CSC55_RS11305 () | 2211203..2211607 | - | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CSC55_RS11310 () | 2211616..2211834 | - | 219 | WP_001573784.1 | hypothetical protein | - |
| CSC55_RS11315 () | 2211841..2212723 | - | 883 | Protein_2111 | DnaD domain-containing protein | - |
| CSC55_RS11320 () | 2212753..2213223 | - | 471 | WP_000934759.1 | single-stranded DNA-binding protein | - |
| CSC55_RS11325 () | 2213224..2213841 | - | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| CSC55_RS11330 () | 2213922..2214842 | - | 921 | WP_000180600.1 | recombinase RecT | - |
| CSC55_RS11335 () | 2214844..2216787 | - | 1944 | WP_001573779.1 | AAA family ATPase | - |
| CSC55_RS11340 () | 2216796..2217059 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| CSC55_RS11345 () | 2217068..2217328 | - | 261 | WP_000291510.1 | DUF1108 family protein | - |
| CSC55_RS11350 () | 2217333..2217635 | - | 303 | WP_000165371.1 | DUF2482 family protein | - |
| CSC55_RS11355 () | 2217730..2217891 | - | 162 | WP_000048129.1 | DUF1270 family protein | - |
| CSC55_RS11360 () | 2217888..2218211 | - | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| CSC55_RS11365 () | 2218266..2218646 | + | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| CSC55_RS11370 () | 2218633..2218830 | - | 198 | WP_001148856.1 | hypothetical protein | - |
| CSC55_RS11375 () | 2218846..2219598 | - | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| CSC55_RS11380 () | 2219649..2219978 | + | 330 | WP_000128909.1 | hypothetical protein | - |
| CSC55_RS11385 () | 2219967..2220182 | - | 216 | WP_001025404.1 | DUF2829 domain-containing protein | - |
| CSC55_RS11390 () | 2220198..2220461 | - | 264 | WP_000854072.1 | helix-turn-helix domain-containing protein | - |
| CSC55_RS11395 () | 2220458..2220632 | - | 175 | Protein_2127 | transcriptional regulator | - |
| CSC55_RS11400 () | 2220595..2221308 | + | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| CSC55_RS11405 () | 2221324..2222256 | + | 933 | WP_000759682.1 | ATP-dependent helicase | - |
| CSC55_RS11410 () | 2222262..2222603 | + | 342 | WP_000591749.1 | hypothetical protein | - |
| CSC55_RS11415 () | 2222807..2222989 | + | 183 | WP_000694772.1 | hypothetical protein | - |
| CSC55_RS11420 () | 2223089..2224072 | + | 984 | WP_001558608.1 | glycosyltransferase | - |
| CSC55_RS11425 () | 2224083..2224325 | + | 243 | WP_000427213.1 | hypothetical protein | - |
| CSC55_RS11430 () | 2224388..2225425 | + | 1038 | WP_001573776.1 | site-specific integrase | - |
| CSC55_RS11435 () | 2225476..2226306 | + | 831 | Protein_2135 | sphingomyelin phosphodiesterase | - |
| CSC55_RS11440 () | 2226563..2227582 | - | 1020 | WP_000595617.1 | leukocidin/hemolysin toxin family protein | - |
| CSC55_RS11445 () | 2227604..2228659 | - | 1056 | WP_000791398.1 | leukocidin family pore-forming toxin | - |
| CSC55_RS11450 () | 2229091..2230313 | + | 1223 | Protein_2138 | ArgE/DapE family deacylase | - |
| CSC55_RS11455 () | 2230752..2232059 | + | 1308 | WP_001045073.1 | TrkH family potassium uptake protein | - |
| CSC55_RS11465 () | 2232637..2232978 | - | 342 | WP_001573771.1 | hypothetical protein | - |
| CSC55_RS11470 () | 2232968..2233264 | - | 297 | WP_001573769.1 | hypothetical protein | - |
| CSC55_RS11475 () | 2233981..2235597 | - | 1617 | WP_000240651.1 | chaperonin GroEL | - |
| CSC55_RS11480 () | 2235673..2235957 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| CSC55_RS11485 () | 2236132..2236875 | + | 744 | WP_000197638.1 | CPBP family intramembrane metalloprotease | - |
| CSC55_RS11490 () | 2236900..2238102 | - | 1203 | WP_001573766.1 | hypothetical protein | - |
| CSC55_RS11495 () | 2238299..2238925 | + | 627 | WP_001573764.1 | nitroreductase family protein | - |
| CSC55_RS11500 () | 2239286..2240071 | + | 786 | WP_000867948.1 | carbon-nitrogen family hydrolase | - |
| CSC55_RS11505 () | 2240674..2240808 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
| CSC55_RS11510 () | 2241044..2241607 | + | 564 | WP_001105709.1 | accessory gene regulator AgrB | - |
| CSC55_RS11515 () | 2241611..2241751 | + | 141 | WP_000735197.1 | cyclic lactone autoinducer peptide | - |
| CSC55_RS11520 () | 2241776..2243068 | + | 1293 | WP_000387809.1 | GHKL domain-containing protein | - |
| CSC55_RS11525 () | 2243087..2243803 | + | 717 | WP_000688492.1 | LytTR family DNA-binding domain-containing protein | - |
| CSC55_RS11530 () | 2244178..2245137 | - | 960 | WP_001253292.1 | carbohydrate kinase | - |
| CSC55_RS11535 () | 2245134..2246618 | - | 1485 | WP_001791588.1 | sucrose-6-phosphate hydrolase | - |
| CSC55_RS11540 () | 2246767..2247717 | - | 951 | WP_000790325.1 | LacI family DNA-binding transcriptional regulator | - |
| CSC55_RS11545 () | 2247901..2249151 | - | 1251 | WP_001052261.1 | ammonium transporter | - |
| CSC55_RS11550 () | 2249360..2249584 | - | 225 | WP_000581078.1 | sulfurtransferase TusA family protein | - |
| CSC55_RS11555 () | 2249644..2250723 | - | 1080 | WP_001573759.1 | YeeE/YedE family protein | - |
| CSC55_RS11560 () | 2251029..2251664 | - | 636 | WP_001283612.1 | redox-sensing transcriptional repressor Rex | - |
| CSC55_RS11565 () | 2251917..2253845 | + | 1929 | WP_000602046.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| CSC55_RS11570 () | 2253990..2254118 | - | 129 | WP_001791590.1 | hypothetical protein | - |
| CSC55_RS11575 () | 2254213..2255823 | + | 1611 | WP_001573757.1 | MutS family DNA mismatch repair protein | - |
| CSC55_RS11580 () | 2256137..2257162 | - | 1026 | WP_000159047.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| CSC55_RS11585 () | 2257155..2257619 | - | 465 | WP_000372755.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| CSC55_RS11590 () | 2257592..2258254 | - | 663 | WP_001086735.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB | - |
| CSC55_RS11595 () | 2258235..2258696 | - | 462 | WP_000590802.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | - |
| CSC55_RS11600 () | 2258734..2258889 | + | 156 | WP_001791591.1 | hypothetical protein | - |
| CSC55_RS11605 () | 2259207..2260895 | + | 1689 | WP_001255785.1 | dihydroxy-acid dehydratase | - |
| CSC55_RS11610 () | 2260923..2262692 | + | 1770 | WP_000047828.1 | biosynthetic-type acetolactate synthase large subunit | - |
| CSC55_RS11615 () | 2262692..2262946 | + | 255 | WP_000196911.1 | ACT domain-containing protein | - |
| CSC55_RS11620 () | 2263083..2264087 | + | 1005 | Protein_2171 | ketol-acid reductoisomerase | - |
| CSC55_RS11625 () | 2264117..2265646 | + | 1530 | WP_110183860.1 | 2-isopropylmalate synthase | - |
| CSC55_RS11630 () | 2265649..2266695 | + | 1047 | WP_000221936.1 | 3-isopropylmalate dehydrogenase | - |
| CSC55_RS11635 () | 2266709..2268074 | + | 1366 | Protein_2174 | 3-isopropylmalate dehydratase large subunit | - |
| CSC55_RS11640 () | 2268075..2268647 | + | 573 | WP_000718949.1 | 3-isopropylmalate dehydratase small subunit | - |
| CSC55_RS11645 () | 2268662..2269930 | + | 1269 | WP_001573749.1 | threonine ammonia-lyase IlvA | - |
| CSC55_RS11650 () | 2270007..2270423 | - | 417 | WP_000688536.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|