MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 130609 bp
Accession: NZ_CP029649 Location: 2488488..2619096 Organism: Staphylococcus aureus strain AR_0472 Replicon: chromosome
Accession: NZ_CP029649 Location: 2488488..2619096 Organism: Staphylococcus aureus strain AR_0472 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC57_RS12655 () | 2483792..2484208 | + | 417 | WP_000688533.1 | hypothetical protein | - |
| CSC57_RS12660 () | 2484285..2485553 | - | 1269 | WP_000216858.1 | threonine ammonia-lyase IlvA | - |
| CSC57_RS12665 () | 2485568..2486140 | - | 573 | WP_000718953.1 | 3-isopropylmalate dehydratase small subunit | - |
| CSC57_RS12670 () | 2486141..2487510 | - | 1370 | Protein_2374 | 3-isopropylmalate dehydratase large subunit | - |
| CSC57_RS12680 () | 2487524..2488570 | - | 1047 | WP_000221945.1 | 3-isopropylmalate dehydrogenase | - |
| CSC57_RS12685 () | 2488573..2490102 | - | 1530 | WP_000094580.1 | 2-isopropylmalate synthase | - |
| CSC57_RS12690 () | 2490132..2491151 | - | 1020 | WP_020978284.1 | ketol-acid reductoisomerase | - |
| CSC57_RS12695 () | 2491273..2491527 | - | 255 | WP_000196911.1 | ACT domain-containing protein | - |
| CSC57_RS12700 () | 2491527..2493296 | - | 1770 | WP_000047813.1 | biosynthetic-type acetolactate synthase large subunit | - |
| CSC57_RS12705 () | 2493324..2495012 | - | 1689 | WP_001255780.1 | dihydroxy-acid dehydratase | - |
| CSC57_RS12710 () | 2495330..2495485 | - | 156 | WP_001789600.1 | hypothetical protein | - |
| CSC57_RS12715 () | 2495523..2495984 | + | 462 | WP_000590797.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | - |
| CSC57_RS12720 () | 2495965..2496627 | + | 663 | WP_001086728.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB | - |
| CSC57_RS12725 () | 2496600..2497064 | + | 465 | WP_000372755.1 | Mycothiol acetyltransferase | VF |
| CSC57_RS12730 () | 2497057..2498082 | + | 1026 | WP_000159033.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| CSC57_RS12735 () | 2498184..2499794 | - | 1611 | WP_000106327.1 | MutS family DNA mismatch repair protein | - |
| CSC57_RS12740 () | 2499883..2500011 | + | 129 | WP_001792272.1 | hypothetical protein | - |
| CSC57_RS12745 () | 2500155..2502083 | - | 1929 | WP_000602067.1 | ABC-F type ribosomal protection protein | - |
| CSC57_RS12750 () | 2502336..2502971 | + | 636 | WP_001283612.1 | redox-sensing transcriptional repressor Rex | - |
| CSC57_RS12755 () | 2503275..2504354 | + | 1080 | WP_000266885.1 | YeeE/YedE family protein | - |
| CSC57_RS12760 () | 2504414..2504638 | + | 225 | WP_000581077.1 | sulfurtransferase TusA family protein | - |
| CSC57_RS12765 () | 2504846..2506096 | + | 1251 | WP_001052276.1 | ammonium transporter | - |
| CSC57_RS12770 () | 2506279..2507229 | + | 951 | WP_000790325.1 | LacI family DNA-binding transcriptional regulator | - |
| CSC57_RS12775 () | 2507378..2508862 | + | 1485 | WP_000141430.1 | sucrose-6-phosphate hydrolase | - |
| CSC57_RS12780 () | 2508859..2509818 | + | 960 | WP_001253305.1 | carbohydrate kinase | - |
| CSC57_RS12785 () | 2510006..2510115 | - | 110 | Protein_2396 | hypothetical protein | - |
| CSC57_RS12790 () | 2510187..2510903 | - | 717 | WP_000688492.1 | LytTR family DNA-binding domain-containing protein | - |
| CSC57_RS12795 () | 2510922..2512214 | - | 1293 | WP_001789596.1 | GHKL domain-containing protein | - |
| CSC57_RS12800 () | 2512239..2512379 | - | 141 | WP_001093929.1 | cyclic lactone autoinducer peptide | - |
| CSC57_RS12805 () | 2512376..2512945 | - | 570 | WP_001105707.1 | Accessory gene regulator protein B | VF |
| CSC57_RS12810 () | 2513181..2513315 | + | 135 | WP_001549197.1 | hypothetical protein | VF |
| CSC57_RS12815 () | 2513915..2514700 | - | 786 | WP_000867942.1 | carbon-nitrogen family hydrolase | - |
| CSC57_RS12820 () | 2515061..2515687 | - | 627 | WP_000522384.1 | nitroreductase family protein | - |
| CSC57_RS12825 () | 2515884..2517146 | + | 1263 | WP_110179781.1 | hypothetical protein | VF |
| CSC57_RS12830 () | 2517171..2517914 | - | 744 | WP_000197643.1 | CPBP family intramembrane metalloprotease | - |
| CSC57_RS12835 () | 2518091..2518375 | + | 285 | WP_000917289.1 | co-chaperone GroES | - |
| CSC57_RS12840 () | 2518451..2520067 | + | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| CSC57_RS12845 () | 2520601..2521908 | - | 1308 | WP_001045085.1 | TrkH family potassium uptake protein | - |
| CSC57_RS12850 () | 2522069..2522980 | + | 912 | WP_000825510.1 | hypothetical protein | VF |
| CSC57_RS12855 () | 2523042..2523842 | + | 801 | WP_001792916.1 | class I SAM-dependent methyltransferase | - |
| CSC57_RS12860 () | 2524260..2525483 | - | 1224 | WP_000206621.1 | ArgE/DapE family deacylase | - |
| CSC57_RS12865 () | 2525919..2526971 | + | 1053 | WP_000791419.1 | hypothetical protein | VF |
| CSC57_RS12870 () | 2526993..2528009 | + | 1017 | WP_000595326.1 | hypothetical protein | VF |
| CSC57_RS12875 () | 2528247..2529077 | - | 831 | Protein_2414 | hypothetical protein | VF |
| CSC57_RS12880 () | 2529128..2530165 | - | 1038 | WP_000857198.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CSC57_RS12885 () | 2530338..2530877 | - | 540 | WP_000391618.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| CSC57_RS12890 () | 2531017..2531184 | - | 168 | WP_031806878.1 | hypothetical protein | - |
| CSC57_RS12895 () | 2531388..2531729 | - | 342 | WP_000591749.1 | hypothetical protein | - |
| CSC57_RS12900 () | 2531735..2532667 | - | 933 | WP_000759682.1 | ATP-dependent helicase | - |
| CSC57_RS12905 () | 2532683..2533396 | - | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| CSC57_RS12910 () | 2533359..2533532 | + | 174 | WP_001801500.1 | hypothetical protein | - |
| CSC57_RS12915 () | 2533529..2533792 | + | 264 | WP_000854072.1 | helix-turn-helix domain-containing protein | - |
| CSC57_RS12920 () | 2533808..2534005 | + | 198 | WP_001148862.1 | hypothetical protein | - |
| CSC57_RS12925 () | 2533992..2534372 | - | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| CSC57_RS12930 () | 2534427..2534750 | + | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| CSC57_RS12935 () | 2534747..2534908 | + | 162 | WP_000048132.1 | DUF1270 family protein | - |
| CSC57_RS12940 () | 2535003..2535305 | + | 303 | WP_000165371.1 | DUF2482 family protein | - |
| CSC57_RS12945 () | 2535310..2535570 | + | 261 | WP_000291510.1 | DUF1108 family protein | - |
| CSC57_RS12950 () | 2535579..2535842 | + | 264 | WP_001205732.1 | hypothetical protein | - |
| CSC57_RS12955 () | 2535851..2537794 | + | 1944 | WP_000700555.1 | AAA family ATPase | - |
| CSC57_RS12960 () | 2537796..2538716 | + | 921 | WP_000138475.1 | recombinase RecT | - |
| CSC57_RS12965 () | 2538797..2539414 | + | 618 | WP_071665632.1 | MBL fold metallo-hydrolase | - |
| CSC57_RS12970 () | 2539415..2539885 | + | 471 | WP_000934760.1 | single-stranded DNA-binding protein | - |
| CSC57_RS12975 () | 2539915..2540808 | + | 894 | WP_000148322.1 | DnaD domain-containing protein | - |
| CSC57_RS12980 () | 2540815..2541033 | + | 219 | WP_000338530.1 | hypothetical protein | - |
| CSC57_RS12985 () | 2541042..2541446 | + | 405 | WP_000401960.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CSC57_RS12990 () | 2541459..2541827 | + | 369 | WP_000101288.1 | hypothetical protein | - |
| CSC57_RS12995 () | 2541831..2542073 | + | 243 | WP_000131389.1 | hypothetical protein | - |
| CSC57_RS13000 () | 2542138..2542587 | + | 450 | WP_000982711.1 | hypothetical protein | - |
| CSC57_RS13005 () | 2542584..2543093 | + | 510 | WP_001105598.1 | hypothetical protein | - |
| CSC57_RS13010 () | 2543090..2543500 | + | 411 | WP_000197968.1 | hypothetical protein | - |
| CSC57_RS13015 () | 2543493..2543981 | + | 489 | Protein_2442 | DUF1024 family protein | - |
| CSC57_RS13020 () | 2543974..2544510 | + | 537 | WP_001066443.1 | dUTP diphosphatase | - |
| CSC57_RS13025 () | 2544547..2544792 | + | 246 | WP_001282074.1 | hypothetical protein | - |
| CSC57_RS13030 () | 2544789..2544995 | + | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| CSC57_RS13035 () | 2544992..2545378 | + | 387 | WP_000592207.1 | hypothetical protein | - |
| CSC57_RS13040 () | 2545375..2545524 | + | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| CSC57_RS13045 () | 2545524..2545724 | + | 201 | WP_000265043.1 | DUF1514 family protein | - |
| CSC57_RS13050 () | 2545752..2546168 | + | 417 | WP_000590122.1 | hypothetical protein | - |
| CSC57_RS13055 () | 2546400..2546699 | + | 300 | WP_000988336.1 | HNH endonuclease | - |
| CSC57_RS13060 () | 2546830..2547174 | + | 345 | WP_000402904.1 | hypothetical protein | - |
| CSC57_RS13065 () | 2547171..2548832 | + | 1662 | WP_000625088.1 | terminase large subunit | - |
| CSC57_RS13070 () | 2548848..2550035 | + | 1188 | WP_000025274.1 | phage portal protein | - |
| CSC57_RS13075 () | 2550019..2550756 | + | 738 | WP_000861914.1 | Clp protease ClpP | - |
| CSC57_RS13080 () | 2550780..2551925 | + | 1146 | WP_000154555.1 | phage major capsid protein | - |
| CSC57_RS13085 () | 2551945..2552229 | + | 285 | WP_000238236.1 | hypothetical protein | - |
| CSC57_RS13090 () | 2552219..2552503 | + | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| CSC57_RS13095 () | 2552487..2552849 | + | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| CSC57_RS13100 () | 2552846..2553250 | + | 405 | WP_000114225.1 | HK97 gp10 family phage protein | - |
| CSC57_RS13105 () | 2553247..2553654 | + | 408 | WP_000565498.1 | hypothetical protein | - |
| CSC57_RS13110 () | 2553655..2554299 | + | 645 | WP_000268741.1 | phage tail protein | - |
| CSC57_RS13115 () | 2554341..2554565 | + | 225 | WP_072050172.1 | Ig-like domain-containing protein | - |
| CSC57_RS13120 () | 2554615..2554965 | + | 351 | WP_001096355.1 | hypothetical protein | - |
| CSC57_RS14860 () | 2555016..2555153 | + | 138 | WP_001549167.1 | hypothetical protein | - |
| CSC57_RS13125 () | 2555210..2559739 | + | 4530 | WP_001795393.1 | phage tail tape measure protein | - |
| CSC57_RS13130 () | 2559736..2561220 | + | 1485 | WP_000567408.1 | phage tail family protein | - |
| CSC57_RS13135 () | 2561236..2565018 | + | 3783 | WP_031806961.1 | phage minor structural protein | - |
| CSC57_RS13140 () | 2565011..2565163 | + | 153 | WP_001000058.1 | hypothetical protein | - |
| CSC57_RS13145 () | 2565209..2565496 | + | 288 | WP_001262620.1 | hypothetical protein | - |
| CSC57_RS13150 () | 2565552..2565926 | + | 375 | WP_000340977.1 | hypothetical protein | - |
| CSC57_RS13155 () | 2566069..2566245 | + | 177 | WP_072353918.1 | putative holin-like toxin | Toxin Detail |
| - () | 2566233..2566407 | - | 175 | - | - | Antitoxin Detail |
| CSC57_RS13165 () | 2566457..2566711 | + | 255 | WP_000611512.1 | phage holin | - |
| CSC57_RS13170 () | 2566723..2567478 | + | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| CSC57_RS13175 () | 2567669..2568160 | + | 492 | WP_000919350.1 | hypothetical protein | VF |
| CSC57_RS13185 () | 2568810..2569145 | + | 336 | Protein_2476 | SH3 domain-containing protein | - |
| CSC57_RS13190 () | 2569240..2569689 | - | 450 | WP_000727651.1 | hypothetical protein | VF |
| CSC57_RS13195 () | 2570371..2570721 | + | 351 | WP_000702262.1 | hypothetical protein | VF |
| CSC57_RS13200 () | 2570774..2571034 | - | 261 | WP_001791826.1 | hypothetical protein | - |
| CSC57_RS13210 () | 2571345..2571524 | - | 180 | WP_000669789.1 | hypothetical protein | - |
| CSC57_RS13215 () | 2571846..2572096 | - | 251 | Protein_2481 | hypothetical protein | VF |
| CSC57_RS13220 () | 2572482..2574230 | + | 1749 | WP_001792928.1 | hypothetical protein | VF |
| CSC57_RS13225 () | 2574217..2574531 | + | 315 | Protein_2483 | hypothetical protein | VF |
| CSC57_RS13230 () | 2574855..2576141 | - | 1287 | WP_001068523.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| CSC57_RS13235 () | 2576341..2576439 | + | 99 | WP_000990056.1 | hypothetical protein | - |
| CSC57_RS13240 () | 2576682..2576858 | + | 177 | WP_000681968.1 | hypothetical protein | - |
| CSC57_RS13245 () | 2577117..2577497 | + | 381 | WP_000691584.1 | GntR family transcriptional regulator | - |
| CSC57_RS13250 () | 2577494..2578390 | + | 897 | WP_000991301.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| CSC57_RS13255 () | 2578391..2579071 | + | 681 | WP_000645733.1 | phenol-soluble modulin export ABC transporter permease subunit PmtB | - |
| CSC57_RS13260 () | 2579068..2579940 | + | 873 | WP_000763048.1 | phenol-soluble modulin export ABC transporter ATP-binding protein PmtC | - |
| CSC57_RS13265 () | 2579940..2580680 | + | 741 | WP_001221651.1 | phenol-soluble modulin export ABC transporter permease subunit PmtD | - |
| CSC57_RS13270 () | 2580746..2581309 | - | 564 | WP_000182842.1 | thioredoxin family protein | - |
| CSC57_RS13275 () | 2581430..2581954 | + | 525 | WP_000966288.1 | membrane protein | - |
| CSC57_RS13280 () | 2582014..2582571 | + | 558 | WP_001033971.1 | DUF1700 domain-containing protein | - |
| CSC57_RS13285 () | 2582568..2583410 | + | 843 | WP_000713072.1 | DUF4097 family beta strand repeat protein | - |
| CSC57_RS13290 () | 2583467..2584507 | - | 1041 | WP_001188043.1 | linear amide C-N hydrolase | - |
| CSC57_RS13295 () | 2584958..2585131 | + | 174 | WP_000267034.1 | hypothetical protein | - |
| CSC57_RS13300 () | 2585188..2585493 | - | 306 | Protein_2498 | YolD-like family protein | - |
| CSC57_RS13305 () | 2585679..2586791 | + | 1113 | WP_000706211.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CSC57_RS13310 () | 2586794..2588857 | + | 2064 | WP_000026854.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CSC57_RS13315 () | 2588866..2589231 | + | 366 | WP_000514485.1 | hypothetical protein | - |
| CSC57_RS13320 () | 2589260..2589670 | - | 411 | WP_000612780.1 | YolD-like family protein | - |
| CSC57_RS13325 () | 2590161..2591840 | + | 1680 | WP_049308183.1 | IS1182 family transposase ISSep1 | Transposase |
| CSC57_RS13330 () | 2591891..2592736 | - | 846 | WP_000733621.1 | hypothetical protein | ARG |
| CSC57_RS13335 () | 2592843..2594600 | + | 1758 | WP_001096369.1 | beta-lactam sensor/signal transducer BlaR1 | - |
| CSC57_RS13340 () | 2594590..2594970 | + | 381 | WP_001284658.1 | penicillinase repressor BlaI | - |
| CSC57_RS13345 () | 2595429..2596457 | + | 1029 | WP_000181322.1 | lactonase family protein | - |
| CSC57_RS13350 () | 2596577..2597956 | - | 1380 | WP_064140212.1 | aldehyde dehydrogenase | - |
| CSC57_RS13355 () | 2598008..2598181 | + | 174 | WP_000637587.1 | hypothetical protein | - |
| CSC57_RS13360 () | 2598374..2599303 | - | 930 | WP_001140871.1 | manganese-dependent inorganic pyrophosphatase | - |
| CSC57_RS13365 () | 2599356..2599916 | - | 561 | WP_000149686.1 | Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB | VF |
| CSC57_RS13370 () | 2600288..2601385 | + | 1098 | WP_000275706.1 | pectate lyase | - |
| CSC57_RS13375 () | 2601590..2603152 | + | 1563 | WP_000323163.1 | SLC13 family permease | - |
| CSC57_RS13380 () | 2603163..2603270 | - | 108 | WP_001802312.1 | hypothetical protein | - |
| CSC57_RS13385 () | 2603342..2604136 | - | 795 | WP_001177828.1 | prephenate dehydratase | - |
| CSC57_RS13390 () | 2604156..2605232 | - | 1077 | WP_000897635.1 | nitric oxide synthase oxygenase | - |
| CSC57_RS13395 () | 2605416..2606885 | + | 1470 | WP_110179782.1 | nicotinate phosphoribosyltransferase | - |
| CSC57_RS13400 () | 2606878..2607699 | + | 822 | WP_000040866.1 | ammonia-dependent NAD(+) synthetase | - |
| CSC57_RS13405 () | 2607970..2608572 | + | 603 | WP_000011542.1 | DUF2179 domain-containing protein | - |
| CSC57_RS13410 () | 2608553..2608726 | + | 174 | WP_000669864.1 | NETI motif-containing protein | - |
| CSC57_RS13415 () | 2609018..2609344 | - | 327 | WP_000434933.1 | staphostatin A | - |
| CSC57_RS13420 () | 2609375..2610541 | - | 1167 | WP_000827764.1 | hypothetical protein | VF |
| CSC57_RS13425 () | 2611402..2612697 | + | 1296 | WP_000572878.1 | adenylosuccinate lyase | - |
| CSC57_RS13430 () | 2612806..2613108 | + | 303 | WP_001165363.1 | hypothetical protein | - |
| CSC57_RS13435 () | 2613280..2613972 | + | 693 | WP_000272071.1 | heptaprenylglyceryl phosphate synthase | - |
| CSC57_RS13440 () | 2613969..2616161 | + | 2193 | WP_000992921.1 | DNA helicase PcrA | - |
| CSC57_RS13445 () | 2616165..2618168 | + | 2004 | WP_000774565.1 | NAD-dependent DNA ligase LigA | - |
| CSC57_RS13450 () | 2618181..2619380 | + | 1200 | WP_000831692.1 | CamS family sex pheromone protein | - |
| CSC57_RS13455 () | 2619469..2621007 | - | 1539 | WP_000957020.1 | sodium/proline symporter PutP | - |
| CSC57_RS13460 () | 2621375..2621677 | + | 303 | WP_000170162.1 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC | - |
| CSC57_RS13465 () | 2621679..2623136 | + | 1458 | WP_000027917.1 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|