MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94001 bp
Accession: NZ_CP029596 Location: 1..94001 Organism: Salmonella enterica strain DA34833 Replicon: plasmid pDA34833-94
Accession: NZ_CP029596 Location: 1..94001 Organism: Salmonella enterica strain DA34833 Replicon: plasmid pDA34833-94
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DLJ70_RS25525 () | 505..717 | + | 213 | WP_000004313.1 | transcriptional regulator PefI | - |
| DLJ70_RS25530 () | 702..1052 | + | 351 | WP_001526811.1 | helix-turn-helix transcriptional regulator | - |
| DLJ70_RS25535 () | 1297..1950 | + | 654 | WP_000178592.1 | DsbA family protein | - |
| DLJ70_RS25540 () | 2083..2982 | + | 900 | WP_010999938.1 | YjiK family protein | - |
| DLJ70_RS25545 () | 3072..3629 | + | 558 | WP_000725062.1 | complement resistance protein Rck | - |
| DLJ70_RS25550 () | 3896..4654 | + | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| DLJ70_RS25555 () | 4751..4972 | - | 222 | WP_071533052.1 | SdiA-regulated domain-containing protein | - |
| DLJ70_RS25565 () | 5832..6713 | - | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| DLJ70_RS25570 () | 6694..6771 | - | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| DLJ70_RS25575 () | 7021..7287 | - | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| DLJ70_RS25585 () | 7466..7908 | - | 443 | Protein_11 | phospholipase | - |
| DLJ70_RS25590 () | 8074..8229 | - | 156 | WP_000983042.1 | hypothetical protein | - |
| DLJ70_RS25595 () | 8242..8526 | - | 285 | WP_000477658.1 | hypothetical protein | - |
| DLJ70_RS25600 () | 8641..9204 | - | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| DLJ70_RS25605 () | 9259..9999 | - | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| DLJ70_RS25610 () | 10019..15277 | - | 5259 | WP_022743192.1 | conjugative transfer relaxase/helicase TraI | - |
| DLJ70_RS25615 () | 15356..15586 | + | 231 | WP_001526804.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| DLJ70_RS25620 () | 15586..15984 | + | 399 | WP_000911322.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| DLJ70_RS25625 () | 15993..18281 | - | 2289 | WP_110010595.1 | type IV conjugative transfer system coupling protein TraD | - |
| DLJ70_RS25630 () | 18658..19389 | - | 732 | WP_022743186.1 | complement resistance protein TraT | - |
| DLJ70_RS25635 () | 19425..19919 | - | 495 | WP_010999946.1 | entry exclusion protein | - |
| DLJ70_RS25640 () | 19935..22757 | - | 2823 | WP_001007086.1 | conjugal transfer mating pair stabilization protein TraG | - |
| DLJ70_RS25645 () | 22754..24136 | - | 1383 | WP_001161719.1 | conjugal transfer protein TraH | - |
| DLJ70_RS25650 () | 24126..24674 | - | 549 | WP_022743183.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| DLJ70_RS25655 () | 24661..24954 | - | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| DLJ70_RS25660 () | 25168..25917 | - | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| DLJ70_RS25665 () | 25929..26144 | - | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| DLJ70_RS25670 () | 26155..27981 | - | 1827 | WP_000827528.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| DLJ70_RS25675 () | 27978..28397 | - | 420 | WP_001229397.1 | HNH endonuclease | - |
| DLJ70_RS25680 () | 28434..29072 | - | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| DLJ70_RS25685 () | 29057..29365 | - | 309 | WP_010999945.1 | hypothetical protein | - |
| DLJ70_RS25690 () | 29384..30376 | - | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| DLJ70_RS25695 () | 30373..31005 | - | 633 | WP_000871995.1 | type-F conjugative transfer system protein TraW | - |
| DLJ70_RS25700 () | 31002..31388 | - | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| DLJ70_RS25705 () | 31363..34011 | - | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| DLJ70_RS25710 () | 34027..34290 | - | 264 | WP_001239256.1 | hypothetical protein | - |
| DLJ70_RS25715 () | 34407..34874 | - | 468 | WP_000549562.1 | hypothetical protein | - |
| DLJ70_RS25720 () | 34867..35088 | - | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| DLJ70_RS25725 () | 35223..35738 | - | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| DLJ70_RS25730 () | 35735..35980 | - | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| DLJ70_RS25735 () | 35958..36554 | - | 597 | WP_000527896.1 | conjugal transfer protein TraP | - |
| DLJ70_RS25740 () | 36544..37965 | - | 1422 | WP_000146700.1 | conjugal transfer protein TraB | - |
| DLJ70_RS25745 () | 37965..38705 | - | 741 | WP_001230719.1 | type-F conjugative transfer system secretin TraK | - |
| DLJ70_RS25750 () | 38692..39258 | - | 567 | WP_000399768.1 | type IV conjugative transfer system protein TraE | - |
| DLJ70_RS25755 () | 39280..39591 | - | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| DLJ70_RS25760 () | 39606..39968 | - | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| DLJ70_RS25765 () | 40010..40237 | - | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| DLJ70_RS25770 () | 40332..41018 | - | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| DLJ70_RS25775 () | 41211..41591 | - | 381 | WP_001151546.1 | relaxosome protein TraM | - |
| DLJ70_RS25785 () | 42006..42476 | + | 471 | WP_001526856.1 | transglycosylase SLT domain-containing protein | - |
| DLJ70_RS26220 () | 42787..43202 | - | 416 | Protein_51 | DUF945 domain-containing protein | - |
| DLJ70_RS26225 () | 43204..43605 | - | 402 | Protein_52 | DUF945 domain-containing protein | - |
| DLJ70_RS26230 () | 43708..43866 | - | 159 | WP_001704449.1 | hypothetical protein | - |
| DLJ70_RS25795 () | 44115..44852 | - | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| DLJ70_RS25800 () | 44849..45283 | - | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| DLJ70_RS25805 () | 45323..47320 | - | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| DLJ70_RS25810 () | 47389..47631 | - | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| DLJ70_RS25815 () | 47686..48204 | - | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| DLJ70_RS26235 () | 48798..48983 | - | 186 | WP_133165360.1 | hypothetical protein | - |
| DLJ70_RS25835 () | 48947..49270 | - | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| DLJ70_RS25840 () | 49506..49940 | - | 435 | WP_000274533.1 | DUF1380 family protein | - |
| DLJ70_RS25845 () | 50007..50441 | - | 435 | WP_001200150.1 | antirestriction protein | - |
| DLJ70_RS25850 () | 50454..50760 | - | 307 | Protein_63 | DUF1472 domain-containing protein | - |
| DLJ70_RS25855 () | 50937..51701 | - | 765 | WP_001246548.1 | membrane protein | - |
| DLJ70_RS25860 () | 51773..52186 | - | 414 | WP_000990114.1 | DUF1380 family protein | - |
| DLJ70_RS25865 () | 52242..52463 | - | 222 | WP_001109588.1 | hypothetical protein | - |
| DLJ70_RS25870 () | 52463..53143 | - | 681 | WP_000088645.1 | DNA methylase | - |
| DLJ70_RS25880 () | 53525..53881 | - | 357 | WP_000369839.1 | hypothetical protein | - |
| DLJ70_RS25885 () | 53874..54344 | - | 471 | WP_000490265.1 | hypothetical protein | - |
| DLJ70_RS25890 () | 54855..55277 | + | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| DLJ70_RS25895 () | 55277..56551 | + | 1275 | WP_022743179.1 | Y-family DNA polymerase | - |
| DLJ70_RS25900 () | 56633..57607 | - | 975 | WP_000064274.1 | ParB/RepB/Spo0J family partition protein | - |
| DLJ70_RS25905 () | 57607..58812 | - | 1206 | WP_000427676.1 | AAA family ATPase | - |
| DLJ70_RS25910 () | 59227..60168 | + | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| DLJ70_RS25915 () | 60200..60766 | - | 567 | WP_001541562.1 | DUF2913 family protein | - |
| DLJ70_RS25920 () | 60823..61158 | - | 336 | WP_001527010.1 | hypothetical protein | - |
| DLJ70_RS25925 () | 61342..61758 | - | 417 | WP_001541564.1 | hypothetical protein | - |
| DLJ70_RS25930 () | 61844..62959 | - | 1116 | WP_001247118.1 | DNA-binding protein | - |
| DLJ70_RS25935 () | 63218..63706 | + | 489 | WP_001135407.1 | hypothetical protein | - |
| DLJ70_RS25945 () | 64361..65101 | + | 741 | WP_001541566.1 | carbonic anhydrase | - |
| DLJ70_RS25950 () | 65308..65868 | + | 561 | WP_001240331.1 | recombinase family protein | - |
| DLJ70_RS25955 () | 65852..67516 | + | 1665 | WP_000098783.1 | IS481 family transposase | - |
| DLJ70_RS25960 () | 67449..68474 | + | 1026 | WP_001576625.1 | ExeA family protein | - |
| DLJ70_RS25965 () | 68663..69700 | - | 1038 | WP_001121399.1 | IS630 family transposase | - |
| DLJ70_RS25970 () | 70309..71202 | + | 894 | WP_000346691.1 | virulence genes transcriptional activator SpvR | - |
| DLJ70_RS25975 () | 71376..71540 | + | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| DLJ70_RS25980 () | 71714..72481 | + | 768 | WP_001526990.1 | virulence protein SpvA | - |
| DLJ70_RS25985 () | 72663..74438 | + | 1776 | WP_001676648.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| DLJ70_RS25990 () | 74719..75444 | + | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| DLJ70_RS25995 () | 75705..76355 | + | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| DLJ70_RS26000 () | 76482..76906 | - | 425 | Protein_91 | IS200/IS605 family transposase | - |
| DLJ70_RS26005 () | 76963..77313 | + | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| DLJ70_RS26010 () | 77380..77940 | - | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| DLJ70_RS26240 () | 78096..78383 | + | 288 | WP_071530243.1 | hypothetical protein | - |
| DLJ70_RS26015 () | 78660..79145 | - | 486 | WP_000905606.1 | membrane protein | - |
| DLJ70_RS26020 () | 79139..79648 | - | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| DLJ70_RS26030 () | 79652..80365 | - | 714 | Protein_97 | EAL domain-containing protein | - |
| DLJ70_RS26035 () | 80374..81156 | - | 783 | WP_000082169.1 | site-specific integrase | - |
| DLJ70_RS26040 () | 81191..81712 | - | 522 | WP_000198608.1 | hypothetical protein | - |
| DLJ70_RS26045 () | 81709..81999 | - | 291 | WP_001266176.1 | hypothetical protein | - |
| DLJ70_RS26050 () | 82001..82306 | - | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| DLJ70_RS26055 () | 82308..82526 | - | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| DLJ70_RS26060 () | 83202..83723 | + | 522 | WP_010999942.1 | hypothetical protein | - |
| DLJ70_RS26070 () | 84207..84503 | + | 297 | WP_001687482.1 | hypothetical protein | - |
| DLJ70_RS26075 () | 84997..85986 | + | 990 | WP_001527061.1 | RepB family plasmid replication initiator protein | - |
| DLJ70_RS26080 () | 86245..86581 | - | 337 | Protein_106 | site-specific integrase | - |
| DLJ70_RS26085 () | 86858..87239 | - | 382 | Protein_107 | NirD/YgiW/YdeI family stress tolerance protein | - |
| DLJ70_RS26095 () | 87958..88260 | + | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| DLJ70_RS26100 () | 88535..89053 | + | 519 | WP_050949696.1 | major pilin PefA | - |
| DLJ70_RS26105 () | 89281..91689 | + | 2409 | WP_000007893.1 | outer membrane usher protein PefC | - |
| DLJ70_RS26110 () | 91682..92374 | + | 693 | WP_001038510.1 | fimbrial chaperone PefD | - |
| DLJ70_RS26115 () | 92389..92946 | + | 558 | WP_010999940.1 | membrane protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|