MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94034 bp
Accession: NZ_CP029594 Location: 1..94034 Organism: Salmonella enterica strain DA34827 Replicon: plasmid pDA34827-94
Accession: NZ_CP029594 Location: 1..94034 Organism: Salmonella enterica strain DA34827 Replicon: plasmid pDA34827-94
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DLJ69_RS25520 () | 1103..1522 | - | 420 | WP_001229397.1 | HNH endonuclease | - |
| DLJ69_RS25525 () | 1559..2197 | - | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| DLJ69_RS25530 () | 2182..2490 | - | 309 | WP_010999945.1 | hypothetical protein | - |
| DLJ69_RS25535 () | 2509..3501 | - | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| DLJ69_RS25540 () | 3498..4130 | - | 633 | WP_000871995.1 | type-F conjugative transfer system protein TraW | - |
| DLJ69_RS25545 () | 4127..4513 | - | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| DLJ69_RS25550 () | 4488..7136 | - | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| DLJ69_RS25555 () | 7152..7415 | - | 264 | WP_001239256.1 | hypothetical protein | - |
| DLJ69_RS25560 () | 7532..7999 | - | 468 | WP_000549562.1 | hypothetical protein | - |
| DLJ69_RS25565 () | 7992..8213 | - | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| DLJ69_RS25570 () | 8348..8863 | - | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| DLJ69_RS25575 () | 8860..9105 | - | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| DLJ69_RS25580 () | 9083..9679 | - | 597 | WP_000527896.1 | conjugal transfer protein TraP | - |
| DLJ69_RS25585 () | 9669..11090 | - | 1422 | WP_000146700.1 | conjugal transfer protein TraB | - |
| DLJ69_RS25590 () | 11090..11830 | - | 741 | WP_001230719.1 | type-F conjugative transfer system secretin TraK | - |
| DLJ69_RS25595 () | 11817..12383 | - | 567 | WP_000399768.1 | type IV conjugative transfer system protein TraE | - |
| DLJ69_RS25600 () | 12405..12716 | - | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| DLJ69_RS25605 () | 12731..13093 | - | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| DLJ69_RS25610 () | 13135..13362 | - | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| DLJ69_RS25615 () | 13457..14143 | - | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| DLJ69_RS25620 () | 14336..14716 | - | 381 | WP_001151546.1 | relaxosome protein TraM | - |
| DLJ69_RS25630 () | 15131..15601 | + | 471 | WP_001526856.1 | transglycosylase SLT domain-containing protein | - |
| DLJ69_RS26215 () | 15912..16327 | - | 416 | Protein_23 | DUF945 domain-containing protein | - |
| DLJ69_RS26220 () | 16329..16730 | - | 402 | Protein_24 | DUF945 domain-containing protein | - |
| DLJ69_RS26225 () | 16833..16991 | - | 159 | WP_001704449.1 | hypothetical protein | - |
| DLJ69_RS25640 () | 17240..17977 | - | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| DLJ69_RS25645 () | 17974..18408 | - | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| DLJ69_RS25650 () | 18448..20445 | - | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| DLJ69_RS25655 () | 20514..20756 | - | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| DLJ69_RS25660 () | 20811..21329 | - | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| DLJ69_RS26230 () | 21923..22150 | - | 228 | WP_134945369.1 | hypothetical protein | - |
| DLJ69_RS25680 () | 22114..22437 | - | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| DLJ69_RS25685 () | 22673..23107 | - | 435 | WP_000274533.1 | DUF1380 family protein | - |
| DLJ69_RS25690 () | 23174..23608 | - | 435 | WP_001200150.1 | antirestriction protein | - |
| DLJ69_RS25695 () | 23621..23927 | - | 307 | Protein_35 | DUF1472 domain-containing protein | - |
| DLJ69_RS25700 () | 24104..24868 | - | 765 | WP_001246548.1 | membrane protein | - |
| DLJ69_RS25705 () | 24940..25353 | - | 414 | WP_000990114.1 | DUF1380 family protein | - |
| DLJ69_RS25710 () | 25409..25630 | - | 222 | WP_001109588.1 | hypothetical protein | - |
| DLJ69_RS25715 () | 25630..26310 | - | 681 | WP_000088645.1 | DNA methylase | - |
| DLJ69_RS25725 () | 26692..27048 | - | 357 | WP_000369839.1 | hypothetical protein | - |
| DLJ69_RS25730 () | 27041..27511 | - | 471 | WP_000490265.1 | hypothetical protein | - |
| DLJ69_RS25735 () | 28022..28444 | + | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| DLJ69_RS25740 () | 28444..29718 | + | 1275 | WP_022743179.1 | Y-family DNA polymerase | - |
| DLJ69_RS25745 () | 29800..30774 | - | 975 | WP_000064274.1 | ParB/RepB/Spo0J family partition protein | - |
| DLJ69_RS25750 () | 30774..31979 | - | 1206 | WP_000427676.1 | AAA family ATPase | - |
| DLJ69_RS25755 () | 32394..33335 | + | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| DLJ69_RS25760 () | 33367..33933 | - | 567 | WP_001541562.1 | DUF2913 family protein | - |
| DLJ69_RS25765 () | 33990..34325 | - | 336 | WP_001527010.1 | hypothetical protein | - |
| DLJ69_RS25770 () | 34509..34925 | - | 417 | WP_001541564.1 | hypothetical protein | - |
| DLJ69_RS25775 () | 35011..36126 | - | 1116 | WP_001247118.1 | DNA-binding protein | - |
| DLJ69_RS25780 () | 36385..36873 | + | 489 | WP_001135407.1 | hypothetical protein | - |
| DLJ69_RS25790 () | 37528..38268 | + | 741 | WP_001541566.1 | carbonic anhydrase | - |
| DLJ69_RS25795 () | 38475..39035 | + | 561 | WP_001240331.1 | recombinase family protein | - |
| DLJ69_RS25800 () | 39019..40683 | + | 1665 | WP_000098783.1 | IS481 family transposase | - |
| DLJ69_RS25805 () | 40616..41641 | + | 1026 | WP_001576625.1 | ExeA family protein | - |
| DLJ69_RS25810 () | 41830..42867 | - | 1038 | WP_001121399.1 | IS630 family transposase | - |
| DLJ69_RS25815 () | 43476..44369 | + | 894 | WP_000346691.1 | virulence genes transcriptional activator SpvR | - |
| DLJ69_RS25820 () | 44543..44707 | + | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| DLJ69_RS25825 () | 44881..45648 | + | 768 | WP_001526990.1 | virulence protein SpvA | - |
| DLJ69_RS25830 () | 45830..47605 | + | 1776 | WP_001676648.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| DLJ69_RS25835 () | 47886..48611 | + | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| DLJ69_RS25840 () | 48872..49522 | + | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| DLJ69_RS25845 () | 49649..50073 | - | 425 | Protein_63 | IS200/IS605 family transposase | - |
| DLJ69_RS25850 () | 50130..50480 | + | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| DLJ69_RS25855 () | 50547..51107 | - | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| DLJ69_RS26235 () | 51263..51550 | + | 288 | WP_071530243.1 | hypothetical protein | - |
| DLJ69_RS25860 () | 51827..52312 | - | 486 | WP_000905606.1 | membrane protein | - |
| DLJ69_RS25865 () | 52306..52815 | - | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| DLJ69_RS25875 () | 52819..53532 | - | 714 | Protein_69 | EAL domain-containing protein | - |
| DLJ69_RS25880 () | 53541..54323 | - | 783 | WP_000082169.1 | site-specific integrase | - |
| DLJ69_RS25885 () | 54358..54879 | - | 522 | WP_000198608.1 | hypothetical protein | - |
| DLJ69_RS25890 () | 54876..55166 | - | 291 | WP_001266176.1 | hypothetical protein | - |
| DLJ69_RS25895 () | 55168..55473 | - | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| DLJ69_RS25900 () | 55475..55693 | - | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| DLJ69_RS25905 () | 56369..56890 | + | 522 | WP_010999942.1 | hypothetical protein | - |
| DLJ69_RS25915 () | 57374..57670 | + | 297 | WP_001687482.1 | hypothetical protein | - |
| DLJ69_RS25920 () | 58164..59153 | + | 990 | WP_001527061.1 | RepB family plasmid replication initiator protein | - |
| DLJ69_RS25925 () | 59412..59748 | - | 337 | Protein_78 | site-specific integrase | - |
| DLJ69_RS25930 () | 60025..60406 | - | 382 | Protein_79 | NirD/YgiW/YdeI family stress tolerance protein | - |
| DLJ69_RS25940 () | 61125..61427 | + | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| DLJ69_RS25945 () | 61702..62220 | + | 519 | WP_000748205.1 | major pilin PefA | - |
| DLJ69_RS25950 () | 62448..64856 | + | 2409 | WP_000007893.1 | outer membrane usher protein PefC | - |
| DLJ69_RS25955 () | 64849..65541 | + | 693 | WP_001038510.1 | fimbrial chaperone PefD | - |
| DLJ69_RS25960 () | 65556..66113 | + | 558 | WP_010999940.1 | membrane protein | - |
| DLJ69_RS25965 () | 66366..67241 | + | 876 | WP_014343944.1 | hypothetical protein | - |
| DLJ69_RS25970 () | 67673..67885 | + | 213 | WP_000004313.1 | transcriptional regulator PefI | - |
| DLJ69_RS25975 () | 67870..68220 | + | 351 | WP_001526811.1 | helix-turn-helix transcriptional regulator | - |
| DLJ69_RS25980 () | 68465..69118 | + | 654 | WP_000178592.1 | DsbA family protein | - |
| DLJ69_RS25985 () | 69251..70150 | + | 900 | WP_010999938.1 | YjiK family protein | - |
| DLJ69_RS25990 () | 70240..70797 | + | 558 | WP_000725062.1 | complement resistance protein Rck | - |
| DLJ69_RS25995 () | 71064..71822 | + | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| DLJ69_RS26000 () | 71919..72140 | - | 222 | WP_071533052.1 | SdiA-regulated domain-containing protein | - |
| DLJ69_RS26010 () | 73000..73881 | - | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| DLJ69_RS26015 () | 73862..73939 | - | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| DLJ69_RS26020 () | 74189..74455 | - | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| DLJ69_RS26030 () | 74634..75076 | - | 443 | Protein_96 | phospholipase | - |
| DLJ69_RS26035 () | 75242..75397 | - | 156 | WP_000983042.1 | hypothetical protein | - |
| DLJ69_RS26040 () | 75410..75694 | - | 285 | WP_000477658.1 | hypothetical protein | - |
| DLJ69_RS26045 () | 75809..76372 | - | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| DLJ69_RS26050 () | 76427..77167 | - | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| DLJ69_RS26055 () | 77187..82445 | - | 5259 | WP_022743192.1 | conjugative transfer relaxase/helicase TraI | - |
| DLJ69_RS26060 () | 82524..82754 | + | 231 | WP_001526804.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| DLJ69_RS26065 () | 82754..83152 | + | 399 | WP_000911322.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| DLJ69_RS26070 () | 83161..85440 | - | 2280 | WP_110029902.1 | type IV conjugative transfer system coupling protein TraD | - |
| DLJ69_RS26075 () | 85817..86548 | - | 732 | WP_022743186.1 | complement resistance protein TraT | - |
| DLJ69_RS26080 () | 86584..87078 | - | 495 | Protein_106 | entry exclusion protein | - |
| DLJ69_RS26085 () | 87094..89916 | - | 2823 | WP_001007086.1 | conjugal transfer mating pair stabilization protein TraG | - |
| DLJ69_RS26090 () | 89913..91295 | - | 1383 | WP_001161719.1 | conjugal transfer protein TraH | - |
| DLJ69_RS26095 () | 91285..91833 | - | 549 | WP_022743183.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| DLJ69_RS26100 () | 91820..92113 | - | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| DLJ69_RS26105 () | 92327..93076 | - | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| DLJ69_RS26110 () | 93088..93303 | - | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|