MGE detailed information
MGE type: Prophage MGE length: 59912 bp
Accession: NZ_CP029579 Location: 42388..102299 Organism: Escherichia coli strain DA33137 Replicon: chromosome
Accession: NZ_CP029579 Location: 42388..102299 Organism: Escherichia coli strain DA33137 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DLJ64_RS00180 () | 37778..38476 | + | 699 | WP_020233615.1 | GntR family transcriptional regulator | - |
| DLJ64_RS00185 () | 38521..39420 | - | 900 | WP_000087220.1 | O-acetylserine/cysteine exporter | - |
| DLJ64_RS00190 () | 39615..40802 | + | 1188 | WP_001523325.1 | efflux MFS transporter YdeE | - |
| DLJ64_RS00195 () | 40929..41024 | + | 96 | WP_000901367.1 | protein MgtS | - |
| DLJ64_RS28990 () | 41024..41128 | + | 105 | WP_211180496.1 | protein MgtT | - |
| DLJ64_RS00200 () | 41243..42133 | - | 891 | WP_001523326.1 | diguanylate cyclase DgcZ | - |
| DLJ64_RS00205 () | 42388..42780 | - | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| DLJ64_RS00215 () | 43145..45190 | - | 2046 | WP_001523328.1 | peptidyl-dipeptidase Dcp | - |
| DLJ64_RS00225 () | 45327..46073 | + | 747 | WP_000636571.1 | hypothetical protein | VF |
| DLJ64_RS00230 () | 46162..46848 | + | 687 | WP_000215553.1 | DNA-binding transcriptional regulator YdfH | - |
| DLJ64_RS00235 () | 47026..47229 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| DLJ64_RS00240 () | 47265..48725 | - | 1461 | WP_000527786.1 | mannitol dehydrogenase family protein | - |
| DLJ64_RS00245 () | 48814..50097 | - | 1284 | Protein_45 | MHS family MFS transporter YdfJ | - |
| DLJ64_RS28470 () | 50701..50814 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| DLJ64_RS00250 () | 50883..51116 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| DLJ64_RS00255 () | 51433..52023 | + | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| DLJ64_RS00260 () | 52121..52231 | - | 111 | Protein_49 | tail fiber assembly protein | - |
| DLJ64_RS00265 () | 52251..52544 | - | 294 | WP_000355609.1 | hypothetical protein | - |
| DLJ64_RS00270 () | 52555..53259 | - | 705 | WP_000235967.1 | tail fiber domain-containing protein | - |
| DLJ64_RS00275 () | 53269..53550 | - | 282 | WP_000654154.1 | hypothetical protein | - |
| DLJ64_RS00280 () | 53547..55946 | - | 2400 | WP_110074589.1 | prophage tail fiber N-terminal domain-containing protein | - |
| DLJ64_RS00285 () | 56011..56610 | - | 600 | WP_001542091.1 | hypothetical protein | VF |
| DLJ64_RS00290 () | 56678..60157 | - | 3480 | WP_021523093.1 | host specificity protein J | - |
| DLJ64_RS00295 () | 60218..60820 | - | 603 | WP_049286672.1 | tail assembly protein | - |
| DLJ64_RS28810 () | 60757..61499 | - | 743 | Protein_57 | C40 family peptidase | - |
| DLJ64_RS00305 () | 61505..62203 | - | 699 | WP_001551186.1 | phage minor tail protein L | - |
| DLJ64_RS00310 () | 62203..62532 | - | 330 | WP_000847345.1 | phage tail protein | - |
| DLJ64_RS00315 () | 62529..65090 | - | 2562 | WP_032153656.1 | phage tail tape measure protein | - |
| DLJ64_RS00320 () | 65083..65517 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| DLJ64_RS00325 () | 65499..65921 | - | 423 | WP_000479153.1 | phage minor tail protein G | - |
| DLJ64_RS00330 () | 65937..66677 | - | 741 | WP_001349920.1 | phage tail protein | - |
| DLJ64_RS00335 () | 66685..67080 | - | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| DLJ64_RS00340 () | 67077..67655 | - | 579 | WP_000975070.1 | phage tail protein | - |
| DLJ64_RS00345 () | 67667..68020 | - | 354 | WP_000752979.1 | head-tail joining protein | - |
| DLJ64_RS00350 () | 68032..68430 | - | 399 | WP_020233914.1 | DNA-packaging protein FI | - |
| DLJ64_RS00355 () | 68472..69497 | - | 1026 | WP_000063277.1 | major capsid protein | - |
| DLJ64_RS00360 () | 69552..69884 | - | 333 | WP_001708751.1 | head decoration protein | - |
| DLJ64_RS00365 () | 69894..71213 | - | 1320 | WP_020233915.1 | S49 family peptidase | - |
| DLJ64_RS00370 () | 71194..72795 | - | 1602 | WP_001356819.1 | phage portal protein | - |
| DLJ64_RS00375 () | 72792..72998 | - | 207 | WP_000198149.1 | gpW family protein | - |
| DLJ64_RS00380 () | 72995..74920 | - | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| DLJ64_RS00385 () | 74895..75440 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| DLJ64_RS00395 () | 75829..76062 | + | 234 | WP_110074590.1 | YlcI/YnfO family protein | - |
| DLJ64_RS00400 () | 76120..76530 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| DLJ64_RS00405 () | 76682..76855 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| DLJ64_RS28485 () | 77027..77182 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| DLJ64_RS28490 () | 77262..77327 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| DLJ64_RS00415 () | 77330..77518 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| DLJ64_RS00420 () | 77529..77741 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| DLJ64_RS00425 () | 78104..78601 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| DLJ64_RS00430 () | 78598..79131 | - | 534 | WP_001092971.1 | lysozyme | - |
| DLJ64_RS00435 () | 79128..79439 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| DLJ64_RS00440 () | 79444..79659 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| DLJ64_RS28995 () | 79879..80049 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| DLJ64_RS00445 () | 80413..80628 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| DLJ64_RS00450 () | 80929..81141 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| DLJ64_RS28495 () | 81196..81285 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| DLJ64_RS00455 () | 81563..82315 | - | 753 | WP_001047135.1 | antitermination protein | - |
| DLJ64_RS00460 () | 82329..83378 | - | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| DLJ64_RS00465 () | 83380..83658 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| DLJ64_RS00470 () | 83725..83976 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| DLJ64_RS00475 () | 84193..84348 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| DLJ64_RS00480 () | 84420..84707 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| DLJ64_RS00485 () | 84707..84946 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| DLJ64_RS00490 () | 84971..85276 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| DLJ64_RS00495 () | 85479..85811 | + | 333 | WP_001301033.1 | protein FlxA | - |
| DLJ64_RS00505 () | 86248..87561 | - | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| DLJ64_RS00510 () | 88045..89073 | - | 1029 | WP_001345551.1 | DUF4868 domain-containing protein | - |
| DLJ64_RS00515 () | 89070..89684 | - | 615 | WP_001265627.1 | hypothetical protein | - |
| DLJ64_RS00520 () | 89893..90558 | - | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| DLJ64_RS00525 () | 90761..91159 | - | 399 | WP_001151242.1 | DUF977 family protein | - |
| DLJ64_RS00530 () | 91200..92165 | - | 966 | WP_000054487.1 | hypothetical protein | - |
| DLJ64_RS00535 () | 92146..92667 | - | 522 | WP_000705355.1 | hypothetical protein | - |
| DLJ64_RS00540 () | 92651..92878 | - | 228 | WP_000921596.1 | transcriptional regulator | - |
| DLJ64_RS00545 () | 92959..93366 | + | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| DLJ64_RS00550 () | 93535..93690 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| DLJ64_RS00555 () | 93692..94267 | + | 576 | WP_000344950.1 | hypothetical protein | - |
| DLJ64_RS00560 () | 94754..94942 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| DLJ64_RS00565 () | 94939..95130 | + | 192 | WP_001083276.1 | lysis protein YdfD | - |
| DLJ64_RS00570 () | 95224..97695 | + | 2472 | WP_000048363.1 | exonuclease | - |
| DLJ64_RS00575 () | 97768..98019 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| DLJ64_RS00580 () | 98054..99334 | + | 1281 | WP_021523105.1 | Transcriptional regulatory protein DegU ; Integrase | Integrase |
| DLJ64_RS00590 () | 99522..100541 | - | 1020 | WP_000836037.1 | Zn-dependent oxidoreductase | - |
| DLJ64_RS00595 () | 100553..101767 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| DLJ64_RS00605 () | 101973..102299 | - | 327 | WP_001314753.1 | YnfA family protein | - |
| DLJ64_RS00610 () | 102434..102775 | + | 342 | WP_000705205.1 | DUF1283 family protein | - |
| DLJ64_RS00615 () | 102810..103370 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| DLJ64_RS00620 () | 103373..104083 | - | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
| DLJ64_RS00625 () | 104191..104496 | + | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| DLJ64_RS00630 () | 104695..107121 | + | 2427 | WP_001551145.1 | dimethyl sulfoxide reductase subunit A | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|