MGE detailed information
MGE type: Conjugative plasmid MGE length: 139191 bp
Accession: NZ_CP029577 Location: 1..139191 Organism: Escherichia coli strain DA33135 Replicon: plasmid pDA33135-139
Accession: NZ_CP029577 Location: 1..139191 Organism: Escherichia coli strain DA33135 Replicon: plasmid pDA33135-139
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DLJ63_RS26100 () | 20..1012 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| DLJ63_RS26105 () | 1042..1347 | + | 306 | WP_000224411.1 | hypothetical protein | - |
| DLJ63_RS26110 () | 1356..1994 | + | 639 | WP_001080257.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| DLJ63_RS26115 () | 1991..3841 | + | 1851 | WP_110046570.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| DLJ63_RS26120 () | 3868..4125 | + | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| DLJ63_RS26125 () | 4118..4861 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| DLJ63_RS26130 () | 4875..5216 | + | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| DLJ63_RS26135 () | 5272..5532 | - | 261 | WP_000736412.1 | hypothetical protein | - |
| DLJ63_RS26140 () | 5613..5897 | + | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| DLJ63_RS26145 () | 5884..6429 | + | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| DLJ63_RS26150 () | 6359..6706 | + | 348 | WP_011666494.1 | P-type conjugative transfer protein TrbJ | - |
| DLJ63_RS26155 () | 6654..7079 | + | 426 | WP_001348758.1 | F-type conjugal transfer protein TrbF | - |
| DLJ63_RS26160 () | 7066..8439 | + | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| DLJ63_RS26165 () | 8436..11261 | + | 2826 | WP_110046572.1 | conjugal transfer mating pair stabilization protein TraG | - |
| DLJ63_RS26170 () | 11258..11767 | + | 510 | WP_000628111.1 | conjugal transfer entry exclusion protein TraS | - |
| DLJ63_RS26175 () | 11781..12512 | + | 732 | WP_012881123.1 | complement resistance protein TraT | - |
| DLJ63_RS26180 () | 12715..13452 | + | 738 | WP_012881122.1 | hypothetical protein | - |
| DLJ63_RS26185 () | 13503..15746 | + | 2244 | WP_110046574.1 | type IV conjugative transfer system coupling protein TraD | - |
| DLJ63_RS26190 () | 15746..21016 | + | 5271 | WP_000948349.1 | conjugative transfer relaxase/helicase TraI | - |
| DLJ63_RS26195 () | 21036..21782 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| DLJ63_RS26200 () | 21841..22701 | + | 861 | WP_000704523.1 | alpha/beta hydrolase | - |
| DLJ63_RS26205 () | 22804..23364 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| DLJ63_RS26210 () | 23493..23705 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| DLJ63_RS26215 () | 23950..24411 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| DLJ63_RS26220 () | 24457..24666 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| DLJ63_RS26225 () | 24704..25294 | + | 591 | WP_000766808.1 | DUF2726 domain-containing protein | - |
| DLJ63_RS26230 () | 25534..25794 | + | 261 | WP_000078109.1 | replication regulatory protein RepA | - |
| DLJ63_RS26240 () | 26027..26101 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| DLJ63_RS26245 () | 26094..26951 | + | 858 | WP_000131001.1 | incFII family plasmid replication initiator RepA | - |
| DLJ63_RS26255 () | 27889..28542 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| DLJ63_RS27830 () | 28635..28892 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| DLJ63_RS26260 () | 28825..29226 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| DLJ63_RS26270 () | 29511..30821 | + | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| DLJ63_RS26275 () | 30850..30948 | + | 99 | Protein_34 | IS1 family transposase | - |
| DLJ63_RS26280 () | 31098..31958 | - | 861 | WP_000027057.1 | class A broad-spectrum beta-lactamase TEM-1 | - |
| DLJ63_RS26285 () | 32080..32784 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| DLJ63_RS28025 () | 32836..32940 | - | 105 | Protein_37 | tunicamycin resistance protein | - |
| DLJ63_RS26295 () | 32953..33813 | - | 861 | WP_000557454.1 | aminoglycoside N-acetyltransferase AAC(3)-IId | - |
| DLJ63_RS26305 () | 33956..34918 | + | 963 | Protein_39 | IS4-like element ISVsa5 family transposase | - |
| DLJ63_RS26310 () | 35028..35933 | + | 906 | Protein_40 | IS4-like element ISVsa5 family transposase | - |
| DLJ63_RS26315 () | 35982..36686 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| DLJ63_RS26320 () | 36750..37196 | + | 447 | Protein_42 | tunicamycin resistance protein | - |
| DLJ63_RS26325 () | 37678..37869 | - | 192 | WP_000951934.1 | hypothetical protein | - |
| DLJ63_RS26330 () | 37893..38120 | + | 228 | WP_000248278.1 | hypothetical protein | - |
| DLJ63_RS26335 () | 38171..39307 | + | 1137 | WP_000080860.1 | DUF3883 domain-containing protein | - |
| DLJ63_RS26340 () | 39422..40784 | + | 1363 | Protein_46 | transposase | - |
| DLJ63_RS26345 () | 40750..41454 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| DLJ63_RS26355 () | 41507..42013 | + | 507 | Protein_48 | transposase | - |
| DLJ63_RS26360 () | 42022..42882 | + | 861 | WP_000493383.1 | EamA family transporter | - |
| DLJ63_RS26365 () | 42914..44113 | - | 1200 | WP_000804064.1 | tetracycline efflux MFS transporter Tet(A) | - |
| DLJ63_RS26370 () | 44219..44845 | + | 627 | WP_031606906.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| DLJ63_RS26375 () | 44877..45113 | - | 237 | WP_042005022.1 | hypothetical protein | - |
| DLJ63_RS26380 () | 45167..46003 | - | 837 | WP_000480972.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| DLJ63_RS26385 () | 46003..46806 | - | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| DLJ63_RS26390 () | 46867..47682 | - | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| DLJ63_RS26405 () | 47990..48166 | - | 177 | Protein_56 | replication protein C | - |
| DLJ63_RS26410 () | 48227..48931 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| DLJ63_RS26420 () | 49053..49958 | + | 906 | WP_000219391.1 | Mph(A) family macrolide 2'-phosphotransferase | - |
| DLJ63_RS26425 () | 49955..51193 | + | 1239 | WP_000004159.1 | MFS transporter | - |
| DLJ63_RS26430 () | 51193..51777 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| DLJ63_RS26445 () | 52270..53034 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| DLJ63_RS27840 () | 53152..53217 | - | 66 | Protein_62 | EAL domain-containing protein | - |
| DLJ63_RS26455 () | 53261..53566 | - | 306 | WP_000130000.1 | PadR family transcriptional regulator | - |
| DLJ63_RS26460 () | 53577..54782 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| DLJ63_RS26465 () | 54938..55141 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| DLJ63_RS26475 () | 55269..56108 | - | 840 | WP_000259031.1 | sulfonamide-resistant dihydropteroate synthase Sul1 | - |
| DLJ63_RS26480 () | 56102..56449 | - | 348 | WP_000679427.1 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| DLJ63_RS26485 () | 56655..57443 | - | 789 | WP_000503573.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5 | - |
| DLJ63_RS26490 () | 57574..58047 | - | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| DLJ63_RS26495 () | 58205..58954 | + | 750 | Protein_70 | class 1 integron integrase IntI1 | - |
| DLJ63_RS26500 () | 59013..59717 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| DLJ63_RS26510 () | 59771..60025 | + | 255 | Protein_72 | iron permease | - |
| DLJ63_RS26515 () | 60066..60593 | + | 528 | WP_000178050.1 | iron transporter | - |
| DLJ63_RS26520 () | 60697..62076 | + | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| DLJ63_RS26525 () | 62079..63362 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
| DLJ63_RS26530 () | 63352..64482 | + | 1131 | WP_000729218.1 | ABC transporter permease | - |
| DLJ63_RS26535 () | 64487..65182 | + | 696 | WP_000117262.1 | ABC transporter ATP-binding protein | - |
| DLJ63_RS26540 () | 65169..65654 | + | 486 | WP_001267176.1 | TlpA family protein disulfide reductase | - |
| DLJ63_RS26545 () | 65679..66164 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| DLJ63_RS26550 () | 66286..66919 | + | 634 | Protein_80 | histidine-type phosphatase | - |
| DLJ63_RS28030 () | 67069..67242 | - | 174 | Protein_81 | transposase | - |
| DLJ63_RS28035 () | 67243..67557 | - | 315 | Protein_82 | hypothetical protein | - |
| DLJ63_RS26565 () | 68230..68969 | - | 740 | Protein_83 | IS3 family transposase | - |
| DLJ63_RS26570 () | 68995..69300 | + | 306 | Protein_84 | IS91 family transposase | - |
| DLJ63_RS26580 () | 69823..70998 | - | 1176 | WP_001020413.1 | enterotoxin production-related protein TieB | - |
| DLJ63_RS26585 () | 71067..73328 | - | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| DLJ63_RS26590 () | 73497..74273 | - | 777 | WP_000981091.1 | energy transducer TonB | - |
| DLJ63_RS26595 () | 74281..75156 | - | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| DLJ63_RS26600 () | 75488..76035 | - | 548 | Protein_89 | primase alpha helix C-terminal domain-containing protein | - |
| DLJ63_RS26625 () | 77607..77942 | - | 336 | WP_001080732.1 | colicin transporter | - |
| DLJ63_RS26635 () | 78071..78418 | + | 348 | WP_000142452.1 | hypothetical protein | - |
| DLJ63_RS26640 () | 78438..78947 | - | 510 | WP_000194542.1 | hypothetical protein | - |
| DLJ63_RS26645 () | 78944..79204 | - | 261 | WP_000371882.1 | hypothetical protein | - |
| DLJ63_RS26650 () | 79306..80045 | + | 740 | Protein_94 | IS3 family transposase | - |
| DLJ63_RS26660 () | 80718..82226 | + | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| DLJ63_RS26665 () | 82316..82699 | + | 384 | Protein_96 | DDE-type integrase/transposase/recombinase | - |
| DLJ63_RS26670 () | 82728..83132 | + | 405 | WP_000839179.1 | IS66 family insertion sequence hypothetical protein | - |
| DLJ63_RS26675 () | 83129..83476 | + | 348 | WP_000612626.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| DLJ63_RS26680 () | 83525..84470 | + | 946 | Protein_99 | IS66 family transposase | - |
| DLJ63_RS26685 () | 84556..85578 | + | 1023 | WP_001310017.1 | IS21-like element IS100 family transposase | - |
| DLJ63_RS26690 () | 85575..86357 | + | 783 | WP_001300609.1 | IS21-like element IS100kyp family helper ATPase IstB | - |
| DLJ63_RS26695 () | 86425..87033 | + | 609 | Protein_102 | IS66 family transposase | - |
| DLJ63_RS26700 () | 87096..87887 | - | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| DLJ63_RS26705 () | 87894..89864 | - | 1971 | WP_001298664.1 | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor | - |
| DLJ63_RS26710 () | 90146..90582 | + | 437 | Protein_105 | transposase | - |
| DLJ63_RS26715 () | 91107..91379 | + | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| DLJ63_RS26720 () | 91825..92000 | + | 176 | Protein_107 | IS3 family transposase | - |
| DLJ63_RS26725 () | 92226..93395 | - | 1170 | WP_001072358.1 | hypothetical protein | - |
| DLJ63_RS26730 () | 93762..93950 | + | 189 | WP_001309252.1 | hypothetical protein | - |
| DLJ63_RS26735 () | 94071..94811 | + | 741 | WP_001066952.1 | tyrosine-type recombinase/integrase | - |
| DLJ63_RS26740 () | 95054..96031 | - | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| DLJ63_RS26755 () | 97206..97847 | - | 642 | WP_000990667.1 | hypothetical protein | - |
| DLJ63_RS26765 () | 100169..100387 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| DLJ63_RS26770 () | 100389..100694 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| DLJ63_RS26775 () | 100695..101504 | + | 810 | WP_000016979.1 | site-specific integrase | - |
| DLJ63_RS26780 () | 101642..101917 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| DLJ63_RS26785 () | 101911..102555 | - | 645 | WP_000633911.1 | AAA family ATPase | - |
| DLJ63_RS26790 () | 102784..103755 | + | 972 | WP_001103694.1 | hypothetical protein | - |
| DLJ63_RS26795 () | 103760..104152 | + | 393 | WP_000340835.1 | plasmid partitioning/stability family protein | - |
| DLJ63_RS26800 () | 104157..104408 | - | 252 | Protein_120 | DUF4113 domain-containing protein | - |
| DLJ63_RS26805 () | 104470..105267 | - | 798 | WP_000544830.1 | IS21-like element IS21 family helper ATPase IstB | - |
| DLJ63_RS26810 () | 105267..106439 | - | 1173 | WP_000952372.1 | IS21-like element IS21 family transposase | - |
| DLJ63_RS26815 () | 106541..107562 | - | 1022 | Protein_123 | translesion error-prone DNA polymerase V subunit UmuC | - |
| DLJ63_RS26820 () | 107562..107999 | - | 438 | WP_000109079.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| DLJ63_RS26825 () | 107996..108244 | - | 249 | WP_000619112.1 | DinI-like family protein | - |
| DLJ63_RS26835 () | 108379..108897 | + | 519 | WP_000115885.1 | ClbS/DfsB family four-helix bundle protein | - |
| DLJ63_RS26840 () | 108916..110136 | + | 1221 | WP_000343766.1 | ISL3-like element ISEc53 family transposase | - |
| DLJ63_RS26850 () | 110555..111457 | + | 903 | WP_001310012.1 | DUF1281 domain-containing protein | - |
| DLJ63_RS26855 () | 111454..111765 | + | 312 | WP_001310011.1 | hypothetical protein | - |
| DLJ63_RS26860 () | 111841..112524 | + | 684 | WP_000086169.1 | DNA methylase | - |
| DLJ63_RS26865 () | 112525..112746 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| DLJ63_RS26870 () | 112760..113194 | + | 435 | WP_000274508.1 | DUF1380 family protein | - |
| DLJ63_RS27845 () | 113239..114009 | + | 771 | WP_001004562.1 | hypothetical protein | - |
| DLJ63_RS26880 () | 114548..114850 | + | 303 | WP_001666994.1 | antirestriction protein | - |
| DLJ63_RS26885 () | 114897..115319 | + | 423 | WP_000271708.1 | DUF1380 family protein | - |
| DLJ63_RS28040 () | 115316..115507 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| DLJ63_RS28045 () | 115477..115957 | - | 481 | Protein_137 | hypothetical protein | - |
| DLJ63_RS26905 () | 116470..116700 | + | 231 | WP_000155844.1 | hypothetical protein | - |
| DLJ63_RS26910 () | 116752..118113 | + | 1362 | WP_000170671.1 | DUF3560 domain-containing protein | - |
| DLJ63_RS26915 () | 118160..118723 | + | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| DLJ63_RS26925 () | 118809..119261 | - | 453 | WP_024185774.1 | hypothetical protein | - |
| DLJ63_RS26935 () | 119563..120090 | + | 528 | WP_000290833.1 | single-stranded DNA-binding protein | - |
| DLJ63_RS26940 () | 120147..120380 | + | 234 | WP_000006018.1 | DUF905 domain-containing protein | - |
| DLJ63_RS26945 () | 120439..122397 | + | 1959 | WP_001145501.1 | ParB/RepB/Spo0J family partition protein | - |
| DLJ63_RS26950 () | 122452..122886 | + | 435 | WP_000845910.1 | conjugation system SOS inhibitor PsiB | - |
| DLJ63_RS26955 () | 122883..123602 | + | 720 | WP_001276230.1 | plasmid SOS inhibition protein A | - |
| - () | 123614..123813 | + | 200 | NuclAT_0 | - | - |
| - () | 123614..123813 | + | 200 | NuclAT_0 | - | - |
| - () | 123614..123813 | + | 200 | NuclAT_0 | - | - |
| - () | 123614..123813 | + | 200 | NuclAT_0 | - | - |
| DLJ63_RS26960 () | 123878..124036 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| DLJ63_RS26980 () | 124952..125239 | + | 288 | WP_000107526.1 | hypothetical protein | - |
| DLJ63_RS26985 () | 125358..126179 | + | 822 | WP_001234489.1 | DUF945 domain-containing protein | - |
| DLJ63_RS26990 () | 126475..127077 | - | 603 | WP_001323326.1 | transglycosylase SLT domain-containing protein | - |
| DLJ63_RS26995 () | 127408..127791 | + | 384 | WP_001151562.1 | relaxosome protein TraM | - |
| DLJ63_RS27000 () | 127985..128671 | + | 687 | WP_000332487.1 | PAS domain-containing protein | - |
| DLJ63_RS27005 () | 128765..128992 | + | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| DLJ63_RS27010 () | 129026..129385 | + | 360 | WP_001098988.1 | type IV conjugative transfer system pilin TraA | - |
| DLJ63_RS27015 () | 129400..129711 | + | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| DLJ63_RS27020 () | 129733..130299 | + | 567 | WP_000399776.1 | type IV conjugative transfer system protein TraE | - |
| DLJ63_RS27025 () | 130310..131014 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| DLJ63_RS27030 () | 131014..132441 | + | 1428 | WP_000146665.1 | conjugal transfer protein TraB | - |
| DLJ63_RS27035 () | 132431..133021 | + | 591 | WP_000002787.1 | conjugal transfer protein TraP | - |
| DLJ63_RS27040 () | 132975..133328 | + | 354 | WP_012602151.1 | DUF2689 domain-containing protein | - |
| DLJ63_RS27045 () | 133340..133573 | + | 234 | WP_000235790.1 | conjugal transfer protein TrbG | - |
| DLJ63_RS27050 () | 133570..134085 | + | 516 | WP_000809889.1 | type IV conjugative transfer system lipoprotein TraV | - |
| DLJ63_RS27055 () | 134220..134441 | + | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| DLJ63_RS27060 () | 134434..134907 | + | 474 | WP_000549566.1 | hypothetical protein | - |
| DLJ63_RS27065 () | 134987..135205 | + | 219 | WP_000556746.1 | hypothetical protein | - |
| DLJ63_RS27075 () | 135572..138202 | + | 2631 | WP_000069752.1 | type IV secretion system protein TraC | - |
| DLJ63_RS27080 () | 138199..138585 | + | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|