MGE detailed information
MGE type: Prophage MGE length: 61423 bp
Accession: NZ_CP029576 Location: 2033631..2095053 Organism: Escherichia coli strain DA33135 Replicon: chromosome
Accession: NZ_CP029576 Location: 2033631..2095053 Organism: Escherichia coli strain DA33135 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DLJ63_RS10455 () | 2029528..2030748 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| DLJ63_RS10460 () | 2030873..2031568 | + | 696 | WP_000919226.1 | dethiobiotin synthase | - |
| DLJ63_RS10465 () | 2031521..2032813 | - | 1293 | WP_001296088.1 | voltage-gated ClC-type chloride channel ClcB | - |
| DLJ63_RS10470 () | 2032974..2033588 | - | 615 | WP_000148693.1 | Tat proofreading chaperone DmsD | - |
| DLJ63_RS10475 () | 2033631..2034485 | - | 855 | WP_000526467.1 | dimethyl sulfoxide reductase anchor subunit | - |
| DLJ63_RS10480 () | 2034487..2035104 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| DLJ63_RS27935 () | 2035115..2036684 | - | 1570 | Protein_1904 | molybdopterin-dependent oxidoreductase | - |
| DLJ63_RS10495 () | 2036745..2039171 | - | 2427 | WP_000041660.1 | dimethyl sulfoxide reductase subunit A | - |
| DLJ63_RS10500 () | 2039370..2039675 | - | 306 | WP_001296085.1 | DUF1161 domain-containing protein | - |
| DLJ63_RS10505 () | 2039783..2040493 | + | 711 | WP_001296084.1 | YnfC family lipoprotein | - |
| DLJ63_RS10510 () | 2040496..2041056 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| DLJ63_RS10515 () | 2041091..2041432 | - | 342 | WP_000705204.1 | DUF1283 family protein | - |
| DLJ63_RS10520 () | 2041567..2041893 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| DLJ63_RS10530 () | 2042099..2043313 | + | 1215 | WP_001296083.1 | starvation-sensing protein RspA | - |
| DLJ63_RS10535 () | 2043325..2044344 | + | 1020 | WP_000836081.1 | Zn-dependent oxidoreductase | - |
| DLJ63_RS10545 () | 2044532..2045812 | - | 1281 | WP_021523105.1 | site-specific integrase | - |
| DLJ63_RS10550 () | 2045847..2046098 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| DLJ63_RS10555 () | 2046171..2048642 | - | 2472 | WP_000048363.1 | exonuclease | - |
| DLJ63_RS10560 () | 2048736..2048927 | - | 192 | WP_001083276.1 | lysis protein YdfD | - |
| DLJ63_RS10565 () | 2048924..2049112 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| DLJ63_RS10570 () | 2049599..2050174 | - | 576 | WP_000344950.1 | hypothetical protein | - |
| DLJ63_RS10575 () | 2050176..2050331 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| DLJ63_RS10580 () | 2050500..2050907 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| DLJ63_RS10585 () | 2050988..2051215 | + | 228 | WP_000921596.1 | transcriptional regulator | - |
| DLJ63_RS10590 () | 2051199..2051720 | + | 522 | WP_000705355.1 | hypothetical protein | - |
| DLJ63_RS10595 () | 2051701..2052666 | + | 966 | WP_000054487.1 | hypothetical protein | - |
| DLJ63_RS10600 () | 2052707..2053105 | + | 399 | WP_001151242.1 | DUF977 family protein | - |
| DLJ63_RS10605 () | 2053308..2053973 | + | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| DLJ63_RS10610 () | 2054182..2054796 | + | 615 | WP_001265627.1 | hypothetical protein | - |
| DLJ63_RS10615 () | 2054793..2055821 | + | 1029 | WP_001345551.1 | DUF4868 domain-containing protein | - |
| DLJ63_RS10620 () | 2056305..2057618 | + | 1314 | WP_000589005.1 | ISNCY family transposase | - |
| DLJ63_RS10630 () | 2058055..2058387 | - | 333 | WP_001301033.1 | protein FlxA | - |
| DLJ63_RS10635 () | 2058590..2058895 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| DLJ63_RS10640 () | 2058920..2059159 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| DLJ63_RS10645 () | 2059159..2059446 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| DLJ63_RS10650 () | 2059518..2059673 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| DLJ63_RS10655 () | 2059890..2060141 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| DLJ63_RS10660 () | 2060208..2060486 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| DLJ63_RS10665 () | 2060488..2061537 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| DLJ63_RS10670 () | 2061551..2062303 | + | 753 | WP_001047135.1 | antitermination protein | - |
| DLJ63_RS27655 () | 2062581..2062670 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| DLJ63_RS10675 () | 2062725..2062937 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| DLJ63_RS10680 () | 2063238..2063453 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| DLJ63_RS28085 () | 2063817..2063987 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| DLJ63_RS10685 () | 2064207..2064422 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| DLJ63_RS10690 () | 2064427..2064738 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| DLJ63_RS10695 () | 2064735..2065268 | + | 534 | WP_001092971.1 | lysozyme | - |
| DLJ63_RS10700 () | 2065265..2065762 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| DLJ63_RS10705 () | 2066125..2066337 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| DLJ63_RS10710 () | 2066348..2066536 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| DLJ63_RS27660 () | 2066539..2066604 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| DLJ63_RS27665 () | 2066684..2066839 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| DLJ63_RS10720 () | 2067011..2067184 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| DLJ63_RS10725 () | 2067336..2067746 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| DLJ63_RS10730 () | 2067804..2068037 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| DLJ63_RS10740 () | 2068426..2068971 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| DLJ63_RS10745 () | 2068946..2070871 | + | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| DLJ63_RS10750 () | 2070868..2071074 | + | 207 | WP_000198149.1 | gpW family protein | - |
| DLJ63_RS10755 () | 2071071..2072672 | + | 1602 | WP_001356819.1 | phage portal protein | - |
| DLJ63_RS10760 () | 2072653..2073972 | + | 1320 | WP_020233915.1 | S49 family peptidase | - |
| DLJ63_RS10765 () | 2073982..2074314 | + | 333 | WP_001708751.1 | head decoration protein | - |
| DLJ63_RS10770 () | 2074369..2075394 | + | 1026 | WP_000063277.1 | major capsid protein | - |
| DLJ63_RS10775 () | 2075436..2075834 | + | 399 | WP_020233914.1 | DNA-packaging protein FI | - |
| DLJ63_RS10780 () | 2075846..2076199 | + | 354 | WP_000752979.1 | head-tail joining protein | - |
| DLJ63_RS10785 () | 2076211..2076789 | + | 579 | WP_000975070.1 | phage tail protein | - |
| DLJ63_RS10790 () | 2076786..2077181 | + | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| DLJ63_RS10795 () | 2077189..2077929 | + | 741 | WP_001349920.1 | phage tail protein | - |
| DLJ63_RS10800 () | 2077945..2078367 | + | 423 | WP_000479153.1 | phage minor tail protein G | - |
| DLJ63_RS10805 () | 2078349..2078783 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| DLJ63_RS10810 () | 2078776..2081337 | + | 2562 | WP_032153656.1 | phage tail tape measure protein | - |
| DLJ63_RS10815 () | 2081334..2081663 | + | 330 | WP_000847345.1 | phage tail protein | - |
| DLJ63_RS10820 () | 2081663..2082361 | + | 699 | WP_001551186.1 | phage minor tail protein L | - |
| DLJ63_RS10825 () | 2082367..2083110 | + | 744 | WP_032153655.1 | C40 family peptidase | - |
| DLJ63_RS10830 () | 2083047..2083649 | + | 603 | WP_049286672.1 | tail assembly protein | - |
| DLJ63_RS10835 () | 2083710..2087189 | + | 3480 | WP_021523093.1 | host specificity protein J | - |
| DLJ63_RS10840 () | 2087257..2087856 | + | 600 | WP_001542091.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| DLJ63_RS10845 () | 2087921..2090320 | + | 2400 | WP_032152843.1 | prophage tail fiber N-terminal domain-containing protein | - |
| DLJ63_RS10850 () | 2090317..2090598 | + | 282 | WP_000654154.1 | hypothetical protein | - |
| DLJ63_RS10855 () | 2090608..2091312 | + | 705 | WP_000235967.1 | tail fiber domain-containing protein | - |
| DLJ63_RS10860 () | 2091323..2091616 | + | 294 | WP_000355609.1 | hypothetical protein | - |
| DLJ63_RS10865 () | 2091636..2091746 | + | 111 | Protein_1978 | tail fiber assembly protein | - |
| DLJ63_RS10870 () | 2091844..2092434 | - | 591 | WP_000086527.1 | recombinase family protein | - |
| DLJ63_RS10875 () | 2092751..2092984 | - | 234 | WP_064669399.1 | cold shock protein YdfK | - |
| DLJ63_RS27670 () | 2093053..2093166 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| DLJ63_RS10880 () | 2093770..2095053 | + | 1284 | Protein_1982 | MHS family MFS transporter YdfJ | - |
| DLJ63_RS10885 () | 2095142..2096602 | + | 1461 | WP_000526709.1 | mannitol dehydrogenase family protein | - |
| DLJ63_RS10890 () | 2096638..2096841 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| DLJ63_RS10895 () | 2097018..2097704 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| DLJ63_RS10900 () | 2097793..2098539 | - | 747 | WP_001296081.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|