MGE detailed information
MGE type: Genomic_island MGE length: 33568 bp
Accession: NZ_CP029574 Location: 1971374..2004941 Organism: Escherichia coli strain DA33133 Replicon: chromosome
Accession: NZ_CP029574 Location: 1971374..2004941 Organism: Escherichia coli strain DA33133 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DLJ62_RS10055 () | 1968135..1968812 | + | 678 | WP_001339397.1 | IS66 family insertion sequence hypothetical protein | - |
| DLJ62_RS10060 () | 1968812..1969159 | + | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| DLJ62_RS10065 () | 1969179..1970750 | + | 1572 | WP_000381395.1 | IS66 family transposase | - |
| DLJ62_RS10070 () | 1970782..1971396 | + | 615 | Protein_1814 | RHS repeat-associated core domain-containing protein | - |
| DLJ62_RS10075 () | 1971374..1971592 | + | 219 | WP_001101841.1 | hypothetical protein | - |
| DLJ62_RS25895 () | 1971589..1971765 | + | 177 | WP_000008098.1 | hypothetical protein | - |
| DLJ62_RS10080 () | 1972196..1973332 | + | 1137 | WP_000420818.1 | ISAs1 family transposase | - |
| DLJ62_RS10085 () | 1973373..1974143 | - | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| DLJ62_RS10090 () | 1974324..1974770 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| DLJ62_RS10095 () | 1974813..1977257 | - | 2445 | WP_000973083.1 | acyl-CoA dehydrogenase FadE | - |
| DLJ62_RS10100 () | 1977497..1978075 | + | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
| DLJ62_RS10105 () | 1978281..1979048 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| DLJ62_RS10110 () | 1979019..1979759 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| DLJ62_RS10115 () | 1979915..1980193 | - | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| DLJ62_RS10120 () | 1980196..1980456 | - | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| DLJ62_RS10125 () | 1980666..1981415 | + | 750 | WP_000056849.1 | C40 family peptidase | - |
| DLJ62_RS10130 () | 1981591..1982088 | + | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| DLJ62_RS10135 () | 1982312..1984024 | - | 1713 | Protein_1828 | flagellar biosynthesis protein FlhA | - |
| DLJ62_RS10140 () | 1983996..1984781 | + | 786 | WP_000207552.1 | putative lateral flagellar export/assembly protein LafU | - |
| DLJ62_RS10145 () | 1984852..1985907 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| DLJ62_RS10150 () | 1985959..1986252 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| DLJ62_RS10155 () | 1986255..1986653 | + | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| DLJ62_RS10160 () | 1986663..1987115 | + | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| DLJ62_RS10165 () | 1987433..1987639 | + | 207 | Protein_1834 | RtcB family protein | - |
| DLJ62_RS10170 () | 1987635..1988156 | + | 522 | Protein_1835 | peptide chain release factor H | - |
| DLJ62_RS10175 () | 1988213..1989670 | - | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| DLJ62_RS10180 () | 1989931..1990389 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| DLJ62_RS10185 () | 1990481..1991725 | + | 1245 | WP_000189532.1 | esterase FrsA | - |
| - () | 1990985..1991065 | + | 81 | NuclAT_12 | - | - |
| - () | 1990985..1991065 | + | 81 | NuclAT_12 | - | - |
| - () | 1990985..1991065 | + | 81 | NuclAT_12 | - | - |
| - () | 1990985..1991065 | + | 81 | NuclAT_12 | - | - |
| DLJ62_RS10190 () | 1991783..1992184 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| DLJ62_RS10195 () | 1992223..1993278 | - | 1056 | WP_000749867.1 | phosphoporin PhoE | - |
| DLJ62_RS10200 () | 1993566..1994669 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| DLJ62_RS10205 () | 1994681..1995934 | + | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| DLJ62_RS10215 () | 1996288..1997496 | + | 1209 | WP_000772656.1 | tyrosine-type recombinase/integrase | - |
| DLJ62_RS10220 () | 1997738..1998946 | + | 1209 | WP_001087767.1 | type I restriction-modification system subunit M | - |
| DLJ62_RS10225 () | 1998939..2000645 | + | 1707 | WP_000132880.1 | zinc ribbon domain-containing protein | - |
| DLJ62_RS10230 () | 2000623..2001693 | + | 1071 | WP_000920172.1 | hypothetical protein | - |
| DLJ62_RS10235 () | 2002094..2002660 | - | 567 | Protein_1847 | MFS transporter | - |
| DLJ62_RS10240 () | 2002682..2002936 | - | 255 | Protein_1848 | IS21-like element IS100kyp family helper ATPase IstB | - |
| DLJ62_RS10245 () | 2002986..2003954 | - | 969 | Protein_1849 | IS21 family transposase | - |
| DLJ62_RS10255 () | 2004038..2004307 | - | 270 | Protein_1850 | class I SAM-dependent methyltransferase | - |
| DLJ62_RS10260 () | 2004318..2004575 | - | 258 | WP_001333700.1 | YjhX family toxin | - |
| DLJ62_RS10265 () | 2004873..2004941 | - | 69 | Protein_1852 | VOC family protein | - |
| DLJ62_RS10270 () | 2004950..2005693 | - | 744 | WP_001081495.1 | epimerase | - |
| DLJ62_RS10275 () | 2005704..2005994 | - | 291 | WP_000558519.1 | (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase | - |
| DLJ62_RS10280 () | 2006043..2006918 | - | 876 | WP_000774142.1 | 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | - |
| DLJ62_RS10285 () | 2006947..2007969 | - | 1023 | WP_000155278.1 | autoinducer 2 ABC transporter substrate-binding protein LsrB | - |
| DLJ62_RS10290 () | 2007996..2008994 | - | 999 | WP_000197460.1 | autoinducer 2 ABC transporter permease LsrD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|