MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 46812 bp
Accession: NZ_CP029490 Location: 124667..171478 Organism: Streptococcus sobrinus strain SL1 Replicon: chromosome
Accession: NZ_CP029490 Location: 124667..171478 Organism: Streptococcus sobrinus strain SL1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DK181_RS00780 () | 120761..123163 | + | 2403 | WP_028798549.1 | penicillin-binding protein PBP1B | - |
| DK181_RS00785 () | 123397..123759 | + | 363 | WP_028798550.1 | hypothetical protein | - |
| DK181_RS00790 () | 124219..127803 | + | 3585 | WP_019771018.1 | DNA-directed RNA polymerase subunit beta | - |
| DK181_RS00795 () | 127924..131562 | + | 3639 | WP_019773487.1 | DNA-directed RNA polymerase subunit beta' | - |
| DK181_RS00800 () | 131856..133520 | + | 1665 | WP_028798551.1 | peptide ABC transporter substrate-binding protein | - |
| DK181_RS00805 () | 133626..134540 | + | 915 | WP_002960866.1 | ABC transporter permease | - |
| DK181_RS00810 () | 134552..135583 | + | 1032 | WP_002960868.1 | ABC transporter permease | - |
| DK181_RS00815 () | 135594..136643 | + | 1050 | WP_002960869.1 | ABC transporter ATP-binding protein | - |
| DK181_RS00820 () | 136640..137563 | + | 924 | WP_002999065.1 | Oligopeptide transport ATP-binding protein OppF | VF |
| DK181_RS00825 () | 137800..139485 | - | 1686 | WP_002960871.1 | DHA2 family efflux MFS transporter permease subunit | - |
| DK181_RS00830 () | 139617..140138 | + | 522 | WP_002960873.1 | PadR family transcriptional regulator | - |
| DK181_RS00835 () | 140148..140456 | + | 309 | WP_002960875.1 | LlsX family protein | - |
| DK181_RS00845 () | 140816..141346 | + | 531 | Protein_124 | DUF1211 domain-containing protein | - |
| DK181_RS00850 () | 141413..142939 | - | 1527 | Protein_125 | IS1182 family transposase IS663 | Transposase |
| DK181_RS10775 () | 143434..143577 | - | 144 | WP_002959475.1 | hypothetical protein | - |
| DK181_RS00855 () | 143567..143857 | - | 291 | WP_002959477.1 | hypothetical protein | - |
| DK181_RS00860 () | 144079..144801 | + | 723 | WP_002959479.1 | putative multidrug ABC transporter ATP-binding protein YbhF | VF |
| DK181_RS00865 () | 144806..145945 | + | 1140 | WP_002959481.1 | ABC transporter permease | - |
| DK181_RS00870 () | 146169..146789 | + | 621 | WP_002959483.1 | TetR/AcrR family transcriptional regulator | - |
| DK181_RS10780 () | 146967..147059 | - | 93 | WP_197711882.1 | type II toxin-antitoxin system YafQ family toxin | - |
| DK181_RS00875 () | 147038..147229 | - | 192 | WP_002959484.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| DK181_RS00880 () | 147233..147514 | - | 282 | WP_002959487.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| DK181_RS00885 () | 147671..148537 | - | 867 | WP_002959489.1 | HTH-type transcriptional regulator CynR | VF |
| DK181_RS00890 () | 148648..149508 | + | 861 | WP_002959490.1 | aldo/keto reductase | - |
| DK181_RS00895 () | 149608..149970 | - | 363 | WP_002959493.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| DK181_RS00900 () | 150331..152715 | - | 2385 | WP_019771344.1 | HAD-IC family P-type ATPase | - |
| DK181_RS00905 () | 152935..153303 | + | 369 | WP_019781971.1 | DUF1033 family protein | - |
| DK181_RS00910 () | 153729..154676 | + | 948 | WP_002959503.1 | ComG operon protein 1 | VF |
| DK181_RS00915 () | 154639..155643 | + | 1005 | WP_029712425.1 | type II secretion system F family protein | - |
| DK181_RS00920 () | 155640..155966 | + | 327 | WP_019770073.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| DK181_RS00925 () | 155992..156354 | + | 363 | WP_002959508.1 | hypothetical protein | - |
| DK181_RS00930 () | 156326..156619 | + | 294 | WP_002959510.1 | type II secretion pathway, pseudopilin PulG | - |
| DK181_RS00935 () | 156603..157040 | + | 438 | WP_002959513.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| DK181_RS00940 () | 157018..157479 | + | 462 | WP_002959515.1 | hypothetical protein | - |
| DK181_RS00950 () | 157681..157947 | + | 267 | WP_002959516.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DK181_RS00955 () | 157934..158209 | + | 276 | WP_002959518.1 | helix-turn-helix domain-containing protein | - |
| DK181_RS00960 () | 158308..159261 | + | 954 | WP_019771347.1 | class I SAM-dependent methyltransferase | - |
| DK181_RS00965 () | 159324..160520 | + | 1197 | WP_002959522.1 | acetate kinase | - |
| DK181_RS00970 () | 160998..161903 | + | 906 | WP_002959524.1 | HTH-type transcriptional regulator CynR | VF |
| DK181_RS00975 () | 162010..162276 | + | 267 | WP_002959526.1 | ACT domain-containing protein | - |
| DK181_RS00980 () | 162288..163625 | + | 1338 | WP_002959528.1 | PFL family protein | - |
| DK181_RS00985 () | 163864..164163 | - | 300 | Protein_153 | hypothetical protein | - |
| DK181_RS00990 () | 164193..165128 | - | 936 | WP_019773382.1 | IS30 family transposase ISSau1 | Transposase |
| DK181_RS00995 () | 165319..165750 | - | 432 | WP_002961167.1 | MarR family transcriptional regulator | - |
| DK181_RS01000 () | 165889..166590 | + | 702 | WP_002961168.1 | phosphoglycerate mutase family protein | - |
| DK181_RS01005 () | 166577..167344 | + | 768 | WP_002961169.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| DK181_RS01010 () | 167509..168093 | + | 585 | WP_002961170.1 | glucosaminidase domain-containing protein | - |
| DK181_RS01015 () | 168260..169294 | + | 1035 | WP_002961171.1 | heat-inducible transcriptional repressor HrcA | - |
| DK181_RS01020 () | 169314..169865 | + | 552 | WP_002961172.1 | nucleotide exchange factor GrpE | - |
| DK181_RS01025 () | 170122..171957 | + | 1836 | WP_002961173.1 | molecular chaperone DnaK | - |
| DK181_RS01030 () | 172524..173660 | + | 1137 | WP_002961174.1 | molecular chaperone DnaJ | - |
| DK181_RS01035 () | 174060..174833 | + | 774 | WP_019777566.1 | tRNA pseudouridine(38-40) synthase TruA | - |
| DK181_RS01040 () | 174799..175560 | + | 762 | WP_002961177.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| DK181_RS01045 () | 175550..176020 | + | 471 | WP_002961179.1 | ECF transporter S component | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|