MGE detailed information
MGE type: Genomic_island MGE length: 24942 bp
Accession: NZ_CP029420 Location: 3544136..3569077 Organism: Escherichia coli strain 3385 Replicon: chromosome
Accession: NZ_CP029420 Location: 3544136..3569077 Organism: Escherichia coli strain 3385 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DFS94_RS17515 () | 3540984..3541703 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| DFS94_RS17520 () | 3541700..3543331 | - | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| DFS94_RS17525 () | 3543512..3543742 | + | 231 | WP_000371715.1 | (4Fe-4S)-binding protein | - |
| DFS94_RS17530 () | 3543754..3544026 | + | 273 | WP_000405645.1 | N-acetyltransferase | - |
| DFS94_RS17535 () | 3544136..3546673 | - | 2538 | WP_001296664.1 | Outer membrane usher protein FimD | VF |
| DFS94_RS17540 () | 3546706..3547398 | - | 693 | WP_000760483.1 | putative fimbrial chaperone YraI | VF |
| DFS94_RS17545 () | 3547463..3547987 | - | 525 | WP_000491818.1 | hypothetical protein | - |
| DFS94_RS17550 () | 3548360..3552199 | + | 3840 | WP_001528154.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| DFS94_RS17555 () | 3553097..3553927 | + | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| DFS94_RS17565 () | 3555083..3559012 | + | 3930 | WP_001080129.1 | Serine protease EspC | VF |
| DFS94_RS17570 () | 3559226..3559498 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| DFS94_RS17575 () | 3559726..3560022 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| DFS94_RS17580 () | 3560050..3560223 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| DFS94_RS17585 () | 3560342..3561859 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| DFS94_RS17590 () | 3562096..3563553 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| DFS94_RS17595 () | 3563612..3565759 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| DFS94_RS17600 () | 3565839..3567173 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| DFS94_RS17610 () | 3567539..3569077 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| DFS94_RS17620 () | 3569876..3570451 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| DFS94_RS17625 () | 3570488..3572185 | - | 1698 | WP_000068941.1 | protein-disulfide reductase DsbD | - |
| DFS94_RS17630 () | 3572161..3572499 | - | 339 | WP_000883409.1 | divalent cation tolerance protein CutA | - |
| DFS94_RS17635 () | 3572615..3573916 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|