MGE detailed information

MGE type: Mobilizable plasmid        MGE length: 178871 bp
Accession: NZ_CP029383        Location: 1..178871         Organism: Klebsiella pneumoniae subsp. pneumoniae strain SCKP020079       Replicon: plasmid pVir_020079


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CLQ72_RS01790 () 1..1011 + 1011 WP_004211839.1 RepB family plasmid replication initiator protein -
CLQ72_RS01795 () 1833..2473 - 641 Protein_1 integrase -
CLQ72_RS01800 () 2921..3194 + 274 Protein_2 IS3 family transposase -
CLQ72_RS01805 () 3331..3867 - 537 WP_004211835.1 hypothetical protein -
CLQ72_RS01810 () 4078..5176 - 1099 Protein_4 IS3 family transposase -
CLQ72_RS01815 () 5257..5542 - 286 Protein_5 hypothetical protein -
CLQ72_RS01820 () 5599..6621 + 1023 Protein_6 IS21 family transposase -
CLQ72_RS01825 () 6618..7400 + 783 WP_004214667.1 IS21-like element ISSen3 family helper ATPase IstB -
CLQ72_RS01830 () 7466..8115 - 650 Protein_8 IS3 family transposase -
CLQ72_RS01835 () 8187..9377 - 1191 Protein_9 RES domain-containing protein -
CLQ72_RS01840 () 9472..9687 + 216 Protein_10 hypothetical protein -
CLQ72_RS01845 () 9747..10184 - 438 WP_004902343.1 hypothetical protein -
CLQ72_RS01850 () 10184..11215 - 1032 WP_004902347.1 ParB/RepB/Spo0J family partition protein -
CLQ72_RS01855 () 11215..12081 - 867 WP_011251296.1 AAA family ATPase -
CLQ72_RS01860 () 12605..12850 - 246 WP_011251294.1 molecular chaperone DnaJ -
CLQ72_RS01865 () 13039..14715 + 1677 Protein_15 hypothetical protein -
CLQ72_RS01870 () 14766..14924 - 159 WP_077250517.1 hypothetical protein -
CLQ72_RS01875 () 15237..16166 + 930 WP_004213558.1 Rpn family recombination-promoting nuclease/putative transposase -
CLQ72_RS01880 () 16311..17090 - 780 WP_004213560.1 site-specific integrase -
CLQ72_RS01885 () 17087..17899 - 813 WP_077250520.1 hypothetical protein -
CLQ72_RS01890 () 18453..18671 - 219 Protein_20 hypothetical protein -
CLQ72_RS01895 () 18880..19086 + 207 WP_004213077.1 hypothetical protein -
CLQ72_RS01900 () 19076..19369 - 294 WP_004213076.1 hypothetical protein -
CLQ72_RS01905 () 19385..20518 - 1134 WP_004213075.1 DUF3800 domain-containing protein -
CLQ72_RS01910 () 21126..21356 + 231 WP_004213073.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
CLQ72_RS01915 () 21353..21796 + 444 WP_004213072.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
CLQ72_RS01920 () 21810..22226 - 417 Protein_26 DUF3644 domain-containing protein -
CLQ72_RS01925 () 22230..22523 - 294 Protein_27 IS3 family transposase -
CLQ72_RS01930 () 22940..23283 + 344 Protein_28 hypothetical protein -
CLQ72_RS01935 () 23576..23758 + 183 WP_071591913.1 hypothetical protein -
CLQ72_RS01940 () 23832..24025 + 194 Protein_30 hypothetical protein -
CLQ72_RS01945 () 24090..24365 - 276 WP_004213938.1 GAF domain-containing protein -
CLQ72_RS01950 () 24293..24496 - 204 WP_004213936.1 hypothetical protein -
CLQ72_RS01955 () 24587..25507 - 921 WP_004213934.1 DUF1471 domain-containing protein -
CLQ72_RS01960 () 25556..26047 - 492 WP_011251327.1 DM13 domain-containing protein -
CLQ72_RS01965 () 26110..26385 - 276 WP_004213932.1 carboxymuconolactone decarboxylase family protein -
CLQ72_RS01970 () 26469..26897 - 429 WP_004902152.1 DUF417 family protein -
CLQ72_RS01975 () 26935..27495 - 561 WP_004213927.1 TetR/AcrR family transcriptional regulator -
CLQ72_RS01980 () 27537..27797 - 261 WP_004213925.1 DUF1471 domain-containing protein -
CLQ72_RS01985 () 28074..28355 + 282 WP_071591912.1 hypothetical protein -
CLQ72_RS01990 () 28464..30665 - 2202 WP_004213924.1 ferric aerobactin receptor IutA -
CLQ72_RS01995 () 30747..32024 - 1278 WP_004213923.1 NADPH-dependent L-lysine N(6)-monooxygenase -
CLQ72_RS02000 () 32028..33761 - 1734 WP_004213922.1 aerobactin synthase IucC -
CLQ72_RS02005 () 33761..34708 - 948 WP_004213921.1 N(6)-hydroxylysine O-acetyltransferase -
CLQ72_RS02010 () 34709..36496 - 1788 WP_085956490.1 aerobactin synthase IucA -
CLQ72_RS02015 () 36590..37789 + 1200 WP_023302795.1 MFS transporter -
CLQ72_RS02020 () 37814..38125 + 312 Protein_46 nuclear transport factor 2 family protein -
CLQ72_RS02025 () 38139..38345 + 207 WP_071591911.1 hypothetical protein -
CLQ72_RS02030 () 38487..38681 + 195 WP_004213918.1 hypothetical protein -
CLQ72_RS02035 () 38817..39304 + 488 Protein_49 IS630 family transposase -
CLQ72_RS02040 () 39542..40051 + 510 WP_004145290.1 peptide deformylase -
CLQ72_RS02045 () 40080..40250 + 171 Protein_51 iron dicitrate transport regulator FecR -
CLQ72_RS02050 () 40601..40918 - 318 WP_004213915.1 c-type lysozyme inhibitor -
CLQ72_RS02055 () 41155..41541 - 387 WP_004902159.1 hypothetical protein -
CLQ72_RS02060 () 41639..42838 + 1200 WP_004902162.1 GTP-binding protein -
CLQ72_RS02065 () 43285..43992 + 708 WP_004213424.1 class I SAM-dependent methyltransferase -
CLQ72_RS02070 () 43912..44331 - 420 Protein_56 hypothetical protein -
CLQ72_RS02075 () 44280..44513 - 234 Protein_57 hypothetical protein -
CLQ72_RS02080 () 44655..45653 - 999 WP_032412871.1 iron ABC transporter permease -
CLQ72_RS02085 () 45659..46615 - 957 WP_004213250.1 ABC transporter substrate-binding protein -
CLQ72_RS02090 () 46637..47464 - 828 WP_004213252.1 ABC transporter ATP-binding protein -
CLQ72_RS02095 () 47663..47900 - 238 Protein_61 cobalamin biosynthesis protein CobW -
CLQ72_RS02100 () 48209..49132 + 924 WP_004213850.1 IS5 family transposase -
CLQ72_RS02105 () 49244..49810 + 567 WP_094818822.1 type I-E CRISPR-associated protein Cas6/Cse3/CasE -
CLQ72_RS02110 () 49813..51308 + 1496 Protein_64 helicase -
CLQ72_RS02115 () 51391..52079 + 689 Protein_65 IS1 family transposase -
CLQ72_RS02120 () 52090..52356 + 267 Protein_66 IS3 family transposase -
CLQ72_RS02125 () 52426..53079 - 654 WP_011251259.1 class I SAM-dependent methyltransferase -
CLQ72_RS02130 () 53622..54254 + 633 WP_004213609.1 mucoid phenotype A regulator RmpA -
CLQ72_RS02135 () 54274..54457 + 184 Protein_69 hypothetical protein -
CLQ72_RS02140 () 54635..55186 + 552 WP_004213611.1 response regulator transcription factor -
CLQ72_RS02145 () 55259..56161 + 903 WP_004213613.1 DMT family transporter -
CLQ72_RS02150 () 56304..56525 - 222 WP_004213615.1 hypothetical protein -
CLQ72_RS02155 () 56587..57894 - 1308 Protein_73 TonB-dependent siderophore receptor -
CLQ72_RS02160 () 57960..58940 + 981 WP_000019473.1 IS5-like element ISKpn26 family transposase -
CLQ72_RS02165 () 58979..59101 - 123 WP_094818825.1 hypothetical protein -
CLQ72_RS02170 () 59146..59649 + 504 Protein_76 DNA polymerase V subunit UmuC -
CLQ72_RS02175 () 59750..60193 + 444 WP_004026357.1 DUF2384 domain-containing protein Antitoxin Detail
CLQ72_RS02180 () 60190..60660 + 471 WP_004026354.1 RES family NAD+ phosphorylase Toxin Detail
CLQ72_RS02185 () 60809..61506 + 698 Protein_79 IS1 family transposase -
CLQ72_RS02190 () 62892..63841 - 950 Protein_80 hypothetical protein -
CLQ72_RS02195 () 64019..64513 + 495 WP_004212794.1 thermonuclease family protein -
CLQ72_RS02200 () 64850..65248 + 399 WP_004212796.1 H-NS histone family protein -
CLQ72_RS02205 () 65695..66699 - 1005 WP_000427619.1 IS110-like element IS5075 family transposase -
CLQ72_RS02210 () 66893..67732 - 840 WP_004212797.1 aldo/keto reductase -
CLQ72_RS02215 () 67729..68208 - 480 WP_004212799.1 hypothetical protein -
CLQ72_RS02220 () 68205..68390 - 186 WP_045145446.1 hypothetical protein -
CLQ72_RS02225 () 68394..68510 + 117 Protein_87 hypothetical protein -
CLQ72_RS02230 () 68793..69023 - 231 WP_011154571.1 hypothetical protein -
CLQ72_RS02235 () 69209..70984 - 1776 WP_004212803.1 ABC transporter permease subunit -
CLQ72_RS02240 () 71003..72529 - 1527 WP_004212804.1 ABC transporter substrate-binding protein -
CLQ72_RS02245 () 72540..73784 - 1245 WP_004212807.1 MFS transporter -
CLQ72_RS02250 () 73811..74644 - 834 WP_004212808.1 ABC transporter ATP-binding protein -
CLQ72_RS02255 () 74641..75486 - 846 WP_004212810.1 ABC transporter ATP-binding protein -
CLQ72_RS02260 () 75580..75765 + 186 WP_071591905.1 hypothetical protein -
CLQ72_RS02265 () 75679..76353 - 675 WP_004212814.1 M20/M25/M40 family metallo-hydrolase -
CLQ72_RS02270 () 76905..77183 - 279 WP_029884731.1 hypothetical protein -
CLQ72_RS02275 () 77646..78632 + 987 Protein_97 IS630 family transposase -
CLQ72_RS02280 () 79008..79508 - 501 WP_004212823.1 transcriptional repressor -
CLQ72_RS02285 () 79653..80054 + 402 WP_004212825.1 phosphoribosyl-AMP cyclohydrolase -
CLQ72_RS02290 () 80091..81311 + 1221 WP_004212827.1 zinc metallochaperone GTPase ZigA -
CLQ72_RS02295 () 81371..81577 - 207 WP_004212829.1 hypothetical protein -
CLQ72_RS02300 () 81580..83229 - 1650 WP_004212831.1 ferrous iron transporter B -
CLQ72_RS02305 () 83240..84370 - 1131 WP_094818814.1 NAD(P)-binding domain-containing protein -
CLQ72_RS02310 () 84441..85822 - 1382 Protein_104 cysteine--tRNA ligase -
CLQ72_RS02315 () 85902..86354 - 453 WP_011251268.1 transcriptional repressor -
CLQ72_RS02320 () 86452..87651 + 1200 WP_014599314.1 GTP-binding protein -
CLQ72_RS02325 () 87722..88144 + 423 WP_004214547.1 RNA polymerase-binding protein DksA -
CLQ72_RS02330 () 88208..89143 + 936 WP_011251270.1 GTP cyclohydrolase I FolE2 -
CLQ72_RS02335 () 89133..89693 + 561 WP_004214543.1 carbonate dehydratase -
CLQ72_RS02340 () 89760..90689 + 930 WP_004214541.1 hypothetical protein -
CLQ72_RS02345 () 90706..91530 - 825 WP_004214540.1 DUF1460 domain-containing protein -
CLQ72_RS02350 () 91960..92961 + 1002 WP_011251272.1 TGS domain-containing protein -
CLQ72_RS02355 () 92954..93805 + 852 WP_004214538.1 M14 family metallocarboxypeptidase -
CLQ72_RS02360 () 93802..95148 + 1347 WP_011154555.1 dihydroorotase -
CLQ72_RS02365 () 95212..96234 + 1023 WP_004214536.1 porphobilinogen synthase -
CLQ72_RS02370 () 96409..96804 + 396 Protein_116 IS3 family transposase -
CLQ72_RS02375 () 96800..98072 - 1273 Protein_117 IS3 family transposase -
CLQ72_RS02380 () 98397..98711 + 315 WP_011251273.1 hypothetical protein -
CLQ72_RS02385 () 98720..99230 + 511 Protein_119 hypothetical protein -
CLQ72_RS02390 () 99220..99660 + 441 WP_011251275.1 hypothetical protein -
CLQ72_RS02395 () 99690..99881 + 192 Protein_121 hypothetical protein -
CLQ72_RS02400 () 100085..101041 - 957 WP_011251280.1 DsbA family protein -
CLQ72_RS02405 () 101101..101442 - 342 WP_011251281.1 hypothetical protein -
CLQ72_RS02410 () 101456..101767 - 312 WP_011251282.1 hypothetical protein -
CLQ72_RS02415 () 101784..102218 - 435 Protein_125 thiol:disulfide interchange protein -
CLQ72_RS02420 () 102235..102932 - 698 Protein_126 IS1 family transposase -
CLQ72_RS02425 () 103046..103504 + 459 Protein_127 IS3 family transposase -
CLQ72_RS02430 () 103709..104020 + 312 WP_011251285.1 type II toxin-antitoxin system HigB family toxin Toxin Detail
CLQ72_RS02435 () 104017..104436 + 420 WP_011251286.1 helix-turn-helix domain-containing protein Antitoxin Detail
CLQ72_RS02440 () 104382..104624 - 243 WP_108970991.1 hypothetical protein -
CLQ72_RS02445 () 104628..105551 + 924 WP_048333456.1 IS5 family transposase -
CLQ72_RS02450 () 105653..105988 - 336 Protein_132 conjugal transfer protein TraI -
CLQ72_RS02455 () 106002..106790 - 789 WP_040217257.1 hypothetical protein -
CLQ72_RS02460 () 106811..107254 - 444 WP_048333569.1 hypothetical protein -
CLQ72_RS02465 () 107850..108120 + 271 Protein_135 hypothetical protein -
CLQ72_RS02470 () 108192..108485 + 294 WP_049126232.1 hypothetical protein -
CLQ72_RS02475 () 108798..109268 + 471 WP_048333570.1 hypothetical protein -
CLQ72_RS02480 () 109335..110258 + 924 WP_004213850.1 IS5 family transposase -
CLQ72_RS02485 () 110315..110431 - 117 Protein_139 transcriptional regulator -
CLQ72_RS02490 () 110492..110986 - 495 WP_004213594.1 hypothetical protein -
CLQ72_RS02495 () 111272..112276 - 1005 WP_000427619.1 IS110-like element IS5075 family transposase -
CLQ72_RS02500 () 112355..115324 - 2970 WP_004213592.1 Tn3 family transposase -
CLQ72_RS02505 () 115327..115884 - 558 WP_004213590.1 recombinase family protein -
CLQ72_RS02510 () 116014..117090 - 1077 WP_000118563.1 lipoprotein signal peptidase -
CLQ72_RS02515 () 117087..119492 - 2406 WP_004213585.1 heavy metal translocating P-type ATPase -
CLQ72_RS02520 () 119578..120012 + 435 WP_000405672.1 Cd(II)/Pb(II)-responsive transcriptional regulator -
CLQ72_RS02525 () 120103..121107 + 1005 WP_000427619.1 IS110-like element IS5075 family transposase -
CLQ72_RS02530 () 121635..123035 - 1401 WP_004152084.1 copper resistance membrane spanning protein PcoS -
CLQ72_RS02535 () 123032..123712 - 681 WP_001188930.1 copper response regulator transcription factor PcoR -
CLQ72_RS02540 () 123767..124696 - 930 WP_004213583.1 copper resistance inner membrane protein PcoD -
CLQ72_RS02545 () 124701..125081 - 381 WP_000025662.1 copper resistance system metallochaperone PcoC -
CLQ72_RS02550 () 125121..126017 - 897 WP_011251290.1 copper resistance outer membrane transporter PcoB -
CLQ72_RS02555 () 126017..127834 - 1818 WP_004213580.1 multicopper oxidase PcoA -
CLQ72_RS02560 () 128068..128535 + 468 WP_048336866.1 hypothetical protein -
CLQ72_RS02565 () 128802..129539 + 738 WP_004118669.1 peptidoglycan DD-metalloendopeptidase family protein -
CLQ72_RS02570 () 129573..129770 - 198 WP_000843497.1 DUF2933 domain-containing protein -
CLQ72_RS02575 () 129811..132258 - 2448 WP_004098955.1 Ag(+)-translocating P-type ATPase SilP -
CLQ72_RS02580 () 132385..132825 - 441 WP_000758228.1 hypothetical protein -
CLQ72_RS02585 () 132912..136058 - 3147 WP_004098958.1 Cu(+)/Ag(+) efflux RND transporter permease subunit SilA -
CLQ72_RS02590 () 136069..137361 - 1293 WP_004213579.1 Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB -
CLQ72_RS02595 () 137475..137837 - 363 WP_004213578.1 cation efflux system protein CusF -
CLQ72_RS02600 () 137866..139251 - 1386 WP_004213577.1 Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC -
CLQ72_RS02605 () 139441..140121 + 681 WP_004213574.1 copper/silver response regulator transcription factor SilR -
CLQ72_RS02610 () 140114..141589 + 1476 WP_000555737.1 copper/silver sensor histidine kinase SilS -
CLQ72_RS02615 () 141840..142271 + 432 WP_023302802.1 silver-binding protein SilE -
CLQ72_RS02620 () 142415..142765 + 351 WP_004213569.1 DUF305 domain-containing protein -
CLQ72_RS02625 () 143152..144060 - 909 WP_023302803.1 HNH endonuclease -
CLQ72_RS02630 () 144697..145671 + 975 WP_004213565.1 sensor domain-containing diguanylate cyclase -
CLQ72_RS02635 () 145975..146265 + 291 WP_004213078.1 hypothetical protein -
CLQ72_RS02640 () 146255..147154 + 900 WP_004225022.1 nucleotide-binding protein -
CLQ72_RS02645 () 147203..149428 - 2226 WP_004215174.1 exclusion suppressor FxsA -
CLQ72_RS02650 () 149430..150332 - 903 WP_004215173.1 hypothetical protein -
CLQ72_RS02655 () 150416..150598 + 183 WP_004225020.1 hypothetical protein -
CLQ72_RS02660 () 150617..151078 - 462 WP_004215188.1 Lrp/AsnC family transcriptional regulator -
CLQ72_RS02665 () 151194..152141 + 948 WP_004215186.1 DMT family transporter -
CLQ72_RS02670 () 152477..153472 + 996 WP_004225018.1 IS110 family transposase -
CLQ72_RS02675 () 153678..154691 - 1014 WP_004210218.1 NAD(P)-dependent alcohol dehydrogenase -
CLQ72_RS02680 () 154804..155331 + 528 WP_004210220.1 cupin domain-containing protein -
CLQ72_RS02685 () 155345..158302 + 2958 WP_077250518.1 Tn3 family transposase -
CLQ72_RS02690 () 158421..158699 + 279 Protein_180 resolvase -
CLQ72_RS02695 () 158708..158794 + 87 WP_032188295.1 hypothetical protein -
CLQ72_RS02700 () 158833..159813 - 981 WP_109491565.1 IS5-like element ISKpn26 family transposase -
CLQ72_RS02705 () 160122..160682 + 561 Protein_183 replication initiation protein -
CLQ72_RS02710 () 160828..161421 - 594 Protein_184 hypothetical protein -
CLQ72_RS02715 () 161431..162015 - 585 Protein_185 hypothetical protein -
CLQ72_RS02720 () 162191..163267 - 1077 WP_029884537.1 hypothetical protein -
CLQ72_RS02725 () 163332..164255 + 924 Protein_187 IS5 family transposase -
CLQ72_RS02730 () 164410..164664 - 255 WP_004213836.1 hypothetical protein -
CLQ72_RS02735 () 164842..165978 + 1137 WP_004213833.1 tyrosine-type recombinase/integrase -
CLQ72_RS02740 () 166044..166361 - 318 WP_004213829.1 hypothetical protein -
CLQ72_RS02745 () 166513..166836 - 324 WP_004197568.1 hypothetical protein -
CLQ72_RS02750 () 166833..167591 - 759 Protein_192 hypothetical protein -
CLQ72_RS02755 () 167588..168547 - 960 WP_011251302.1 DNA replication protein -
CLQ72_RS02760 () 168590..168997 - 408 WP_004186937.1 hypothetical protein -
CLQ72_RS02765 () 169007..169450 - 444 WP_004213821.1 hypothetical protein -
CLQ72_RS02770 () 169471..170546 - 1076 Protein_196 IS3 family transposase -
CLQ72_RS02775 () 170714..171682 + 969 WP_004213807.1 IS110 family transposase -
CLQ72_RS02780 () 171701..171910 - 210 Protein_198 IS3 family transposase -
CLQ72_RS02785 () 172010..173602 - 1593 WP_004902302.1 IS66-like element ISKox1 family transposase -
CLQ72_RS02790 () 173633..173983 - 351 WP_004189161.1 IS66 family insertion sequence element accessory protein TnpB -
CLQ72_RS02795 () 173980..174420 - 441 WP_004215130.1 IS66 family insertion sequence hypothetical protein -
CLQ72_RS02800 () 174617..174799 + 183 WP_004902307.1 DUF4113 domain-containing protein -
CLQ72_RS02805 () 174878..175106 + 229 Protein_203 plasmid stabilization protein -
CLQ72_RS02810 () 175497..175916 - 420 Protein_204 hypothetical protein -
CLQ72_RS02815 () 176005..176976 - 972 WP_004117790.1 ParB/RepB/Spo0J family plasmid partition protein -
CLQ72_RS02820 () 176976..178142 - 1167 WP_004211841.1 plasmid-partitioning protein SopA -
CLQ72_RS02825 () 178098..178346 + 249 WP_071591903.1 hypothetical protein -
CLQ72_RS02830 () 178561..178842 - 282 WP_073558148.1 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance