MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 122194 bp
Accession: NZ_CP029368 Location: 1..122194 Organism: Escherichia coli strain WCHEC035148 Replicon: plasmid pQnrS1_035148
Accession: NZ_CP029368 Location: 1..122194 Organism: Escherichia coli strain WCHEC035148 Replicon: plasmid pQnrS1_035148
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DI496_RS00835 () | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| DI496_RS00840 () | 1263..2003 | - | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| DI496_RS00845 () | 2124..2312 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| DI496_RS00850 () | 2679..3848 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| DI496_RS00855 () | 4074..4249 | - | 176 | Protein_4 | IS3 family transposase | - |
| DI496_RS00860 () | 4695..4967 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| DI496_RS00865 () | 5492..5928 | - | 437 | Protein_6 | IS3 family transposase IS2 | Transposase |
| DI496_RS00870 () | 6210..8180 | + | 1971 | WP_001496335.1 | Hemin receptor | VF |
| DI496_RS00875 () | 8187..8978 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| DI496_RS00880 () | 9041..9649 | - | 609 | Protein_9 | IS66 family transposase ISEc22 | Transposase |
| DI496_RS00885 () | 9717..10499 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| DI496_RS00890 () | 10496..11518 | - | 1023 | WP_000255956.1 | IS21 family transposase IS100kyp | Transposase |
| DI496_RS00900 () | 11604..12549 | - | 946 | Protein_12 | IS66 family transposase ISEc8 | Transposase |
| DI496_RS00905 () | 12598..12972 | - | 375 | WP_024193849.1 | IS66 family transposase ISKpn24 | Transposase |
| DI496_RS00910 () | 12997..13701 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| DI496_RS00920 () | 14028..14504 | + | 477 | WP_112031936.1 | non-heme ferritin-like protein | - |
| DI496_RS00925 () | 14716..14973 | - | 258 | WP_112031957.1 | phosphoribulokinase | - |
| DI496_RS00930 () | 14947..15969 | + | 1023 | Protein_17 | family 1 glycosylhydrolase | - |
| DI496_RS00935 () | 16128..16688 | - | 561 | WP_112031937.1 | TetR/AcrR family transcriptional regulator | - |
| DI496_RS00940 () | 16776..17327 | - | 552 | WP_112031938.1 | OsmC family protein | - |
| DI496_RS00945 () | 17418..17753 | - | 336 | WP_003863470.1 | carboxymuconolactone decarboxylase family protein | - |
| DI496_RS00950 () | 17780..18574 | - | 795 | WP_112031939.1 | 3-alpha-hydroxycholanate dehydrogenase (NADP(+)) | VF |
| DI496_RS00955 () | 18731..19072 | - | 342 | WP_112031940.1 | thioredoxin family protein | - |
| DI496_RS00960 () | 19287..20396 | + | 1110 | WP_112031941.1 | alkene reductase | - |
| DI496_RS00965 () | 20465..21163 | + | 699 | WP_112031942.1 | DsbA family oxidoreductase | - |
| DI496_RS00970 () | 21505..22410 | - | 906 | WP_112031943.1 | LysR family transcriptional regulator | - |
| DI496_RS00975 () | 22576..22902 | + | 327 | WP_112031944.1 | thioredoxin | - |
| DI496_RS00980 () | 23112..23321 | + | 210 | WP_112031945.1 | DUF1471 domain-containing protein | - |
| DI496_RS00985 () | 23493..23905 | + | 413 | Protein_28 | IS3 family transposase ISVch4 | Transposase |
| DI496_RS00990 () | 23984..24688 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| DI496_RS01000 () | 25969..27444 | - | 1476 | WP_112031946.1 | SEC-C domain-containing protein | - |
| DI496_RS01015 () | 29368..30087 | - | 720 | WP_013263795.1 | replication initiation protein | - |
| DI496_RS01020 () | 30647..30988 | + | 342 | WP_000057569.1 | hypothetical protein | - |
| DI496_RS01025 () | 31003..31794 | - | 792 | WP_001452808.1 | SprT-like domain-containing protein | - |
| DI496_RS01030 () | 31945..33210 | - | 1266 | WP_016359299.1 | translesion error-prone DNA polymerase V subunit MucB | - |
| DI496_RS01035 () | 33198..33638 | - | 441 | WP_104558120.1 | translesion error-prone DNA polymerase V autoproteolytic subunit MucA | - |
| DI496_RS01045 () | 34054..34479 | + | 426 | WP_000447669.1 | antirestriction protein | - |
| DI496_RS01050 () | 34537..34941 | + | 405 | WP_000881513.1 | hypothetical protein | - |
| DI496_RS01055 () | 34951..35190 | + | 240 | WP_016359300.1 | hypothetical protein | - |
| DI496_RS01060 () | 36075..36371 | + | 297 | WP_000545925.1 | hypothetical protein | - |
| DI496_RS01070 () | 37055..37843 | - | 789 | WP_112031950.1 | MipA/OmpV family protein | - |
| DI496_RS01075 () | 37969..38661 | + | 693 | WP_014063958.1 | Phosphate regulon transcriptional regulatory protein PhoB | VF |
| DI496_RS01080 () | 38658..39839 | + | 1182 | WP_112031951.1 | two-component sensor histidine kinase | - |
| DI496_RS01085 () | 39931..41076 | + | 1146 | WP_112031952.1 | efflux RND transporter periplasmic adaptor subunit | - |
| DI496_RS01090 () | 41073..44132 | + | 3060 | WP_112031953.1 | efflux RND transporter permease subunit | - |
| DI496_RS01095 () | 44299..44661 | + | 363 | WP_112031954.1 | Tn3 family transposase ISPsy42 | Transposase |
| DI496_RS01100 () | 44673..45377 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| DI496_RS01110 () | 45430..48324 | - | 2895 | Protein_47 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| DI496_RS01115 () | 48327..48641 | - | 315 | Protein_48 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| DI496_RS01125 () | 48695..49399 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| DI496_RS01130 () | 49469..49942 | - | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| DI496_RS01135 () | 50098..51102 | + | 1005 | Protein_51 | IS91 family transposase ISAzo26 | Transposase |
| DI496_RS01140 () | 51156..51860 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| DI496_RS01145 () | 51927..52543 | - | 617 | Protein_53 | transposase | - |
| DI496_RS01150 () | 52938..53594 | + | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| DI496_RS01155 () | 53913..54341 | - | 429 | Protein_55 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| DI496_RS01160 () | 54374..55765 | - | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| DI496_RS01165 () | 55802..56374 | - | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| DI496_RS01170 () | 56511..57101 | - | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| DI496_RS01175 () | 57219..57461 | + | 243 | WP_000844627.1 | transposase | - |
| DI496_RS01180 () | 57493..58143 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| DI496_RS01185 () | 58249..59448 | + | 1200 | WP_001493765.1 | Tetracycline resistance protein, class C | ARG |
| DI496_RS01190 () | 59480..60364 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| DI496_RS01195 () | 60502..60909 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| DI496_RS01200 () | 60898..62649 | + | 1752 | Protein_64 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| DI496_RS01205 () | 62864..64636 | - | 1773 | WP_001262767.1 | DUF262 domain-containing protein | - |
| DI496_RS01215 () | 64921..65322 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| DI496_RS25920 () | 65255..65512 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| DI496_RS01220 () | 65605..66258 | - | 654 | WP_000616800.1 | CPBP family intramembrane metalloprotease | - |
| DI496_RS01230 () | 67197..68054 | - | 858 | WP_032152935.1 | incFII family plasmid replication initiator RepA | - |
| DI496_RS01235 () | 68047..68121 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| DI496_RS01245 () | 68356..68613 | - | 258 | WP_000083821.1 | replication regulatory protein RepA | - |
| DI496_RS01250 () | 69018..70040 | + | 1023 | WP_000156883.1 | IS110 family transposase ISSm1 | Transposase |
| DI496_RS01255 () | 70512..70865 | + | 354 | WP_000005489.1 | hypothetical protein | - |
| DI496_RS01260 () | 71278..71856 | - | 579 | WP_032152936.1 | DUF2726 domain-containing protein | - |
| DI496_RS01270 () | 71889..72586 | + | 698 | Protein_75 | IS1 family transposase IS1S | Transposase |
| DI496_RS01275 () | 72695..73057 | + | 363 | WP_059330006.1 | IS66 family transposase ISEc23 | Transposase |
| DI496_RS01280 () | 73054..73404 | + | 351 | WP_000624725.1 | IS66 family transposase ISEc47 | Transposase |
| DI496_RS01285 () | 73435..73656 | + | 222 | WP_000080227.1 | hypothetical protein | - |
| DI496_RS01290 () | 73608..73949 | + | 342 | Protein_79 | IS66 family transposase IS682 | Transposase |
| DI496_RS01295 () | 74013..74492 | - | 480 | WP_001496175.1 | ArgR family transcriptional regulator | - |
| DI496_RS01300 () | 74573..75976 | - | 1404 | WP_000514417.1 | YfcC family protein | - |
| DI496_RS01305 () | 76024..77028 | - | 1005 | WP_086625071.1 | Ornithine carbamoyltransferase | VF |
| DI496_RS01310 () | 77113..78024 | - | 912 | WP_000440183.1 | carbamate kinase | - |
| DI496_RS01315 () | 78035..79255 | - | 1221 | WP_000410951.1 | arginine deiminase | - |
| DI496_RS01320 () | 80148..80630 | + | 483 | Protein_85 | VENN motif pre-toxin domain-containing protein | - |
| DI496_RS01325 () | 80576..81022 | - | 447 | Protein_86 | incFII family plasmid replication initiator RepA | - |
| DI496_RS01330 () | 81015..81089 | - | 75 | WP_032336874.1 | RepA leader peptide Tap | - |
| DI496_RS01340 () | 81325..81582 | - | 258 | WP_000083833.1 | replication regulatory protein RepA | - |
| DI496_RS01345 () | 81866..82072 | - | 207 | WP_015387399.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 82059..82120 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - () | 82059..82120 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - () | 82059..82120 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - () | 82059..82120 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| DI496_RS01355 () | 82259..82441 | - | 183 | WP_000968309.1 | hypothetical protein | - |
| DI496_RS01365 () | 82542..83158 | + | 617 | Protein_91 | IS1 family transposase IS1G | Transposase |
| DI496_RS01370 () | 83196..84767 | - | 1572 | WP_023149734.1 | IS66 family transposase ISCro1 | Transposase |
| DI496_RS01375 () | 84787..85134 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| DI496_RS01380 () | 85134..85811 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| DI496_RS26195 () | 85866..85955 | + | 90 | Protein_95 | IS1 family transposase | - |
| DI496_RS01395 () | 86256..86468 | - | 213 | WP_005012601.1 | hypothetical protein | - |
| DI496_RS01400 () | 86602..87162 | - | 561 | WP_000139363.1 | fertility inhibition protein FinO | - |
| DI496_RS01405 () | 87217..87993 | - | 777 | WP_086625070.1 | conjugal transfer pilus acetylase TraX | - |
| DI496_RS26200 () | 87932..88102 | - | 171 | WP_086625069.1 | hypothetical protein | - |
| DI496_RS01415 () | 88099..88521 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| DI496_RS01420 () | 88568..88870 | - | 303 | WP_001666994.1 | antirestriction protein | - |
| DI496_RS01430 () | 89407..90177 | - | 771 | WP_001006251.1 | hypothetical protein | - |
| DI496_RS01435 () | 90222..90656 | - | 435 | WP_001546462.1 | DUF1380 family protein | - |
| DI496_RS01440 () | 90670..90891 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| DI496_RS01445 () | 90892..91575 | - | 684 | WP_032181561.1 | DNA methylase | - |
| DI496_RS01450 () | 91652..91956 | - | 305 | Protein_106 | hypothetical protein | - |
| DI496_RS01455 () | 91960..92862 | - | 903 | WP_064766247.1 | DUF1281 domain-containing protein | - |
| DI496_RS01465 () | 93600..94571 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| DI496_RS01470 () | 94571..95737 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| DI496_RS01475 () | 96325..97080 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| DI496_RS01480 () | 97802..98608 | - | 807 | WP_000016970.1 | site-specific integrase | - |
| DI496_RS01485 () | 98609..98914 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| DI496_RS01490 () | 98916..99134 | - | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| DI496_RS01500 () | 99694..99924 | + | 231 | WP_001261286.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| DI496_RS01505 () | 99921..100337 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| DI496_RS01510 () | 100412..101977 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| DI496_RS01515 () | 101962..102984 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| DI496_RS01525 () | 103238..103935 | - | 698 | Protein_118 | IS1 family transposase IS1G | Transposase |
| DI496_RS01540 () | 104461..106662 | - | 2202 | WP_000973519.1 | Ferric aerobactin receptor | VF |
| DI496_RS01545 () | 106744..108021 | - | 1278 | WP_000750130.1 | L-lysine N6-monooxygenase | VF |
| DI496_RS01550 () | 108018..109760 | - | 1743 | WP_112031956.1 | Aerobactin synthase | VF |
| DI496_RS01555 () | 109760..110707 | - | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| DI496_RS01560 () | 110708..112432 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| DI496_RS01565 () | 112568..113761 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| DI496_RS01570 () | 114141..114521 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| DI496_RS01580 () | 114862..115275 | - | 414 | Protein_126 | phosphopyruvate hydratase | - |
| DI496_RS01585 () | 115273..115530 | + | 258 | Protein_127 | Tn3 family transposase | - |
| DI496_RS01590 () | 115764..116621 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| DI496_RS01595 () | 116618..117475 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| DI496_RS01600 () | 117472..118299 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| DI496_RS01605 () | 118299..119213 | - | 915 | WP_000949005.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| DI496_RS01620 () | 119569..120266 | + | 698 | Protein_132 | IS1 family transposase IS1G | Transposase |
| DI496_RS01625 () | 120446..120959 | - | 514 | Protein_133 | DUF4113 domain-containing protein | - |
| DI496_RS26205 () | 121020..121124 | - | 105 | Protein_134 | AAA family ATPase | - |
| DI496_RS01635 () | 121126..121449 | - | 324 | Protein_135 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|