MGE detailed information
MGE type: IScluster/Tn MGE length: 16423 bp
Accession: NZ_CP029286 Location: 27346..43768 Organism: Xanthomonas phaseoli pv. phaseoli strain Xcp25 Replicon: plasmid unnamedc
Accession: NZ_CP029286 Location: 27346..43768 Organism: Xanthomonas phaseoli pv. phaseoli strain Xcp25 Replicon: plasmid unnamedc
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DGM81_RS21965 (DGM81_23225) | 22805..23479 | + | 675 | WP_017163690.1 | recombinase family protein | - |
| DGM81_RS21970 (DGM81_23235) | 23878..24747 | + | 870 | WP_017172484.1 | site-specific DNA-methyltransferase | - |
| DGM81_RS21975 (DGM81_23240) | 24744..25745 | + | 1002 | WP_017172485.1 | XcyI family restriction endonuclease | - |
| DGM81_RS21980 (DGM81_23245) | 26887..27174 | - | 288 | WP_022560525.1 | hypothetical protein | - |
| DGM81_RS22390 | 29025..31529 | + | 2505 | WP_236493581.1 | type III secretion system effector protein XopC | - |
| DGM81_RS21995 (DGM81_23285) | 32113..33200 | + | 1088 | WP_087944778.1 | IS3 family transposase ISXac2 | Transposase |
| DGM81_RS22000 (DGM81_23295) | 33421..33741 | + | 321 | WP_033481941.1 | ParC family partition-associated protein | - |
| DGM81_RS22005 (DGM81_23300) | 33920..35413 | + | 1494 | WP_022560531.1 | hypothetical protein | - |
| DGM81_RS22010 (DGM81_23305) | 35533..38562 | - | 3030 | WP_022560486.1 | Tn3 family transposase ISPsy42 | Transposase |
| DGM81_RS22015 (DGM81_23310) | 38559..39152 | - | 594 | WP_022560487.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| DGM81_RS22020 (DGM81_23315) | 39364..39618 | + | 255 | WP_022557731.1 | plasmid stability protein | Antitoxin Detail |
| DGM81_RS22025 (DGM81_23320) | 39615..40031 | + | 417 | WP_022557732.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| DGM81_RS22030 (DGM81_23325) | 40045..40593 | + | 549 | WP_039588199.1 | plasmid pRiA4b ORF-3 family protein | - |
| DGM81_RS22035 (DGM81_23330) | 40806..41078 | + | 273 | WP_046121237.1 | hypothetical protein | - |
| DGM81_RS22040 (DGM81_23335) | 41391..42032 | + | 642 | WP_039575435.1 | DNA-binding protein | - |
| DGM81_RS22045 (DGM81_23340) | 42045..42614 | + | 570 | WP_022560534.1 | restriction endonuclease | - |
| DGM81_RS22050 (DGM81_23350) | 42681..43768 | - | 1088 | Protein_47 | IS3 family transposase ISXac2 | Transposase |
| DGM81_RS22055 (DGM81_23355) | 43959..44210 | + | 252 | WP_039573365.1 | hypothetical protein | - |
| DGM81_RS22060 (DGM81_23365) | 44639..48145 | + | 3507 | WP_127447498.1 | type III secretion system effector avirulence protein AvrBs3 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|