MGE detailed information
MGE type: IScluster/Tn MGE length: 6270 bp
Accession: NZ_CP029276 Location: 11876..18145 Organism: Xanthomonas citri strain M11 Replicon: plasmid unnameda
Accession: NZ_CP029276 Location: 11876..18145 Organism: Xanthomonas citri strain M11 Replicon: plasmid unnameda
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DGM98_RS21905 (DGM98_22990) | 7367..8281 | - | 915 | WP_022557729.1 | hypothetical protein | - |
| DGM98_RS22510 (DGM98_22995) | 8954..9139 | + | 186 | Protein_10 | avirulence protein | - |
| DGM98_RS21915 (DGM98_23000) | 9202..10254 | + | 1053 | WP_022557730.1 | type III secretion system YopJ family effector AvrBsT | - |
| DGM98_RS21920 (DGM98_23015) | 11538..11786 | - | 249 | WP_042826723.1 | hypothetical protein | - |
| DGM98_RS21925 (DGM98_23020) | 11876..12834 | - | 959 | Protein_13 | IS3 family transposase ISXcd1 | Transposase |
| DGM98_RS21930 (DGM98_23025) | 12867..15896 | - | 3030 | WP_022560486.1 | Tn3 family transposase ISPsy42 | Transposase |
| DGM98_RS21935 (DGM98_23030) | 15893..16486 | - | 594 | WP_022560487.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| DGM98_RS21940 (DGM98_23035) | 16698..16952 | + | 255 | WP_022557731.1 | plasmid stability protein | Antitoxin Detail |
| DGM98_RS21945 (DGM98_23040) | 16949..17365 | + | 417 | WP_022557732.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| DGM98_RS21950 (DGM98_23045) | 17379..17933 | + | 555 | WP_033482006.1 | plasmid pRiA4b ORF-3 family protein | - |
| DGM98_RS21955 (DGM98_23050) | 18008..18145 | - | 138 | Protein_19 | IS3 family transposase ISXcd1 | Transposase |
| DGM98_RS21960 (DGM98_23055) | 18194..18742 | - | 549 | WP_022557734.1 | DNA topoisomerase | - |
| DGM98_RS21965 (DGM98_23060) | 18897..20189 | - | 1293 | WP_033481893.1 | M12 family metallo-peptidase | - |
| DGM98_RS21970 (DGM98_23065) | 20316..21635 | - | 1320 | WP_022557736.1 | right-handed parallel beta-helix repeat-containing protein | - |
| DGM98_RS21975 (DGM98_23075) | 22010..22864 | - | 855 | WP_022557737.1 | DNA topoisomerase | - |
| DGM98_RS21980 (DGM98_23080) | 22866..23114 | - | 249 | WP_033481882.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|