MGE detailed information
MGE type: Genomic_island MGE length: 30829 bp
Accession: NZ_CP029275 Location: 3066310..3097138 Organism: Xanthomonas citri strain M11 Replicon: chromosome
Accession: NZ_CP029275 Location: 3066310..3097138 Organism: Xanthomonas citri strain M11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DGM98_RS13395 (DGM98_13965) | 3061764..3062843 | - | 1080 | WP_099801958.1 | type IV secretion system protein | - |
| DGM98_RS13400 (DGM98_13970) | 3062940..3063764 | - | 825 | WP_174232338.1 | hypothetical protein | - |
| DGM98_RS13405 (DGM98_13975) | 3063757..3066210 | - | 2454 | WP_099801960.1 | VirB4 family type IV secretion/conjugal transfer ATPase | - |
| DGM98_RS13410 (DGM98_13980) | 3066310..3066621 | - | 312 | WP_005920266.1 | Type IV secretion system protein virB3 | VF |
| DGM98_RS13415 (DGM98_13985) | 3066614..3067030 | - | 417 | WP_078566587.1 | Type IV secretion system protein virB2 | VF |
| DGM98_RS13420 (DGM98_13990) | 3067087..3067917 | - | 831 | WP_162808467.1 | Type IV secretion system protein virB1 | VF |
| DGM98_RS13425 (DGM98_13995) | 3067980..3069029 | - | 1050 | WP_174232339.1 | Type IV secretion system protein VirB11 | VF |
| DGM98_RS13430 (DGM98_14000) | 3069035..3069811 | - | 777 | WP_174232377.1 | Type IV secretion system protein virB10 | VF |
| DGM98_RS13435 (DGM98_14005) | 3070201..3070968 | - | 768 | WP_005920257.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| DGM98_RS13440 (DGM98_14010) | 3070965..3071996 | - | 1032 | WP_162808415.1 | Type IV secretion system protein virB8 | VF |
| DGM98_RS13445 (DGM98_14015) | 3072121..3072531 | - | 411 | WP_005914237.1 | TcpQ domain-containing protein | - |
| DGM98_RS13450 (DGM98_14020) | 3072865..3074538 | - | 1674 | WP_089095178.1 | Protein VirD4 | VF |
| DGM98_RS13455 (DGM98_14025) | 3074575..3074817 | - | 243 | WP_022559483.1 | hypothetical protein | - |
| DGM98_RS13460 (DGM98_14030) | 3075683..3076912 | + | 1230 | WP_158526043.1 | IS91 family transposase ISCARN110 | Transposase |
| DGM98_RS13465 (DGM98_14035) | 3076904..3077194 | - | 291 | WP_099802819.1 | NadS family protein | Antitoxin Detail |
| DGM98_RS13470 (DGM98_14040) | 3077194..3077508 | - | 315 | WP_099802820.1 | hypothetical protein | Toxin Detail |
| DGM98_RS13475 (DGM98_14045) | 3077961..3078590 | - | 630 | WP_145958286.1 | hypothetical protein | - |
| DGM98_RS13480 | 3078667..3078858 | + | 192 | WP_193588907.1 | helix-turn-helix domain-containing protein | - |
| DGM98_RS13485 (DGM98_14055) | 3078855..3079052 | + | 198 | WP_099801965.1 | hypothetical protein | - |
| DGM98_RS13490 (DGM98_14060) | 3079136..3079477 | + | 342 | WP_099801966.1 | hypothetical protein | - |
| DGM98_RS13495 (DGM98_14065) | 3079474..3079677 | + | 204 | WP_099801967.1 | hypothetical protein | - |
| DGM98_RS13500 (DGM98_14070) | 3079674..3079853 | + | 180 | WP_099801968.1 | hypothetical protein | - |
| DGM98_RS13505 (DGM98_14075) | 3079850..3080116 | + | 267 | WP_099801969.1 | hypothetical protein | - |
| DGM98_RS13510 (DGM98_14080) | 3080109..3080456 | + | 348 | WP_099801970.1 | hypothetical protein | - |
| DGM98_RS13515 (DGM98_14085) | 3080588..3080947 | + | 360 | WP_099863717.1 | helix-turn-helix domain-containing protein | - |
| DGM98_RS13520 (DGM98_14090) | 3081183..3081464 | + | 282 | WP_099801972.1 | hypothetical protein | - |
| DGM98_RS13525 (DGM98_14095) | 3081461..3081787 | + | 327 | WP_145958287.1 | hypothetical protein | - |
| DGM98_RS13530 (DGM98_14100) | 3081784..3082038 | + | 255 | WP_145958288.1 | hypothetical protein | - |
| DGM98_RS13535 (DGM98_14105) | 3082156..3082464 | + | 309 | WP_145958289.1 | helix-turn-helix domain-containing protein | - |
| DGM98_RS13540 (DGM98_14110) | 3082779..3083015 | + | 237 | WP_227479511.1 | hypothetical protein | - |
| DGM98_RS13545 (DGM98_14115) | 3083008..3083442 | + | 435 | WP_099801977.1 | hypothetical protein | - |
| DGM98_RS13550 (DGM98_14120) | 3083456..3083923 | + | 468 | WP_099801978.1 | hypothetical protein | - |
| DGM98_RS13555 (DGM98_14130) | 3084378..3084749 | + | 372 | WP_227479510.1 | hypothetical protein | - |
| DGM98_RS13560 (DGM98_14135) | 3084944..3085348 | + | 405 | WP_145982132.1 | hypothetical protein | - |
| DGM98_RS13565 (DGM98_14140) | 3085501..3085686 | - | 186 | WP_199428842.1 | hypothetical protein | - |
| DGM98_RS13570 | 3085793..3086404 | - | 612 | WP_145958291.1 | hypothetical protein | - |
| DGM98_RS13575 (DGM98_14145) | 3086541..3086993 | + | 453 | WP_099801981.1 | Rha family transcriptional regulator | - |
| DGM98_RS13580 (DGM98_14150) | 3086978..3087616 | - | 639 | WP_159067314.1 | hypothetical protein | - |
| DGM98_RS13590 (DGM98_14160) | 3087881..3089902 | - | 2022 | WP_099801983.1 | excinuclease ABC subunit UvrB | - |
| DGM98_RS13595 (DGM98_14165) | 3090041..3090583 | + | 543 | WP_099801984.1 | GspH/FimT family pseudopilin | - |
| DGM98_RS13605 (DGM98_14175) | 3090766..3091173 | - | 408 | WP_005920246.1 | Fimbrial protein | VF |
| DGM98_RS13610 (DGM98_14180) | 3091206..3094952 | - | 3747 | WP_089112126.1 | PilC/PilY family type IV pilus protein | - |
| DGM98_RS13615 (DGM98_14185) | 3094963..3095490 | - | 528 | WP_099802821.1 | PilX N-terminal domain-containing pilus assembly protein | - |
| DGM98_RS13620 (DGM98_14190) | 3095493..3096653 | - | 1161 | WP_099801985.1 | PilW family protein | - |
| DGM98_RS13625 (DGM98_14195) | 3096659..3097138 | - | 480 | WP_099801986.1 | hypothetical protein | VF |
| DGM98_RS13630 (DGM98_14200) | 3097135..3097653 | - | 519 | WP_099802822.1 | Tfp pilus assembly protein FimT/FimU | - |
| DGM98_RS13635 (DGM98_14205) | 3097779..3099164 | - | 1386 | WP_007971433.1 | nucleotide 5'-monophosphate nucleosidase PpnN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|