MGE detailed information
MGE type: IScluster/Tn MGE length: 6270 bp
Accession: NZ_CP029274 Location: 11877..18146 Organism: Xanthomonas citri strain T21 Replicon: plasmid unnameda
Accession: NZ_CP029274 Location: 11877..18146 Organism: Xanthomonas citri strain T21 Replicon: plasmid unnameda
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DGN02_RS22225 (DGN02_23185) | 7367..8281 | - | 915 | WP_022557729.1 | hypothetical protein | - |
| DGN02_RS22845 (DGN02_23190) | 8955..9140 | + | 186 | Protein_10 | avirulence protein | - |
| DGN02_RS22235 (DGN02_23195) | 9203..10255 | + | 1053 | WP_022557730.1 | type III secretion system YopJ family effector AvrBsT | - |
| DGN02_RS22240 (DGN02_23210) | 11539..11787 | - | 249 | WP_042826723.1 | hypothetical protein | - |
| DGN02_RS22245 (DGN02_23215) | 11877..12835 | - | 959 | Protein_13 | IS3 family transposase ISXcd1 | Transposase |
| DGN02_RS22250 (DGN02_23220) | 12868..15897 | - | 3030 | WP_022560486.1 | Tn3 family transposase ISPsy42 | Transposase |
| DGN02_RS22255 (DGN02_23225) | 15894..16487 | - | 594 | WP_022560487.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| DGN02_RS22260 (DGN02_23230) | 16699..16953 | + | 255 | WP_022557731.1 | plasmid stability protein | Antitoxin Detail |
| DGN02_RS22265 (DGN02_23235) | 16950..17366 | + | 417 | WP_022557732.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| DGN02_RS22270 (DGN02_23240) | 17380..17934 | + | 555 | WP_033482006.1 | plasmid pRiA4b ORF-3 family protein | - |
| DGN02_RS22275 (DGN02_23245) | 18009..18146 | - | 138 | Protein_19 | IS3 family transposase ISXcd1 | Transposase |
| DGN02_RS22280 (DGN02_23250) | 18195..18743 | - | 549 | WP_022557734.1 | DNA topoisomerase | - |
| DGN02_RS22285 (DGN02_23255) | 18898..20190 | - | 1293 | WP_033481893.1 | M12 family metallo-peptidase | - |
| DGN02_RS22290 (DGN02_23260) | 20317..21636 | - | 1320 | WP_022557736.1 | right-handed parallel beta-helix repeat-containing protein | - |
| DGN02_RS22295 (DGN02_23270) | 22011..22865 | - | 855 | WP_022557737.1 | DNA topoisomerase | - |
| DGN02_RS22300 (DGN02_23275) | 22867..23115 | - | 249 | WP_033481882.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|