MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 49010 bp
Accession: NZ_CP029272 Location: 1..49010 Organism: Xanthomonas citri pv. fuscans strain FH61 Replicon: plasmid unnameda
Accession: NZ_CP029272 Location: 1..49010 Organism: Xanthomonas citri pv. fuscans strain FH61 Replicon: plasmid unnameda
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DGN07_RS22570 (DGN07_23535) | 48..419 | - | 372 | WP_022557717.1 | hypothetical protein | - |
| DGN07_RS22575 (DGN07_23540) | 546..944 | - | 399 | WP_039731964.1 | hypothetical protein | - |
| DGN07_RS22580 (DGN07_23545) | 1539..1814 | - | 276 | WP_022557719.1 | hypothetical protein | - |
| DGN07_RS22585 (DGN07_23550) | 2374..2697 | - | 324 | WP_022557721.1 | hypothetical protein | - |
| DGN07_RS22590 (DGN07_23565) | 4019..4627 | + | 609 | WP_040965625.1 | hypothetical protein | - |
| DGN07_RS22595 (DGN07_23570) | 4664..5344 | - | 681 | WP_234338472.1 | hypothetical protein | - |
| DGN07_RS23135 | 5286..5852 | - | 567 | WP_022557726.1 | hypothetical protein | - |
| DGN07_RS22610 (DGN07_23585) | 5893..6354 | - | 462 | WP_039731445.1 | hypothetical protein | - |
| DGN07_RS22615 (DGN07_23590) | 6533..7390 | - | 858 | WP_033481873.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| DGN07_RS22620 (DGN07_23595) | 7383..8297 | - | 915 | WP_022557729.1 | hypothetical protein | - |
| DGN07_RS22630 | 10179..10283 | + | 105 | Protein_11 | type III secretion system effector protein | - |
| DGN07_RS22635 (DGN07_23610) | 10418..11470 | + | 1053 | WP_022557730.1 | type III secretion system YopJ family effector AvrBsT | - |
| DGN07_RS22640 (DGN07_23615) | 11915..13012 | + | 1098 | WP_046831597.1 | IS5 family transposase ISXoo14 | Transposase |
| DGN07_RS22645 | 13009..13155 | + | 147 | WP_158526406.1 | hypothetical protein | - |
| DGN07_RS22650 (DGN07_23625) | 13152..14110 | - | 959 | Protein_15 | IS3 family transposase ISXcd1 | Transposase |
| DGN07_RS22655 (DGN07_23630) | 14143..17172 | - | 3030 | WP_022560486.1 | Tn3 family transposase ISPsy42 | Transposase |
| DGN07_RS22660 (DGN07_23635) | 17169..17762 | - | 594 | WP_022560487.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| DGN07_RS22665 (DGN07_23640) | 17974..18228 | + | 255 | WP_022557731.1 | plasmid stability protein | Antitoxin Detail |
| DGN07_RS22670 (DGN07_23645) | 18225..18641 | + | 417 | WP_022557732.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| DGN07_RS22675 (DGN07_23650) | 18655..19209 | + | 555 | WP_033482006.1 | plasmid pRiA4b ORF-3 family protein | - |
| DGN07_RS22680 (DGN07_23655) | 19284..19421 | - | 138 | Protein_21 | IS3 family transposase ISXcd1 | Transposase |
| DGN07_RS22685 (DGN07_23660) | 19470..20018 | - | 549 | WP_022557734.1 | DNA topoisomerase | - |
| DGN07_RS22690 (DGN07_23665) | 20173..21465 | - | 1293 | WP_033481893.1 | M12 family metallo-peptidase | - |
| DGN07_RS22695 (DGN07_23670) | 21592..22911 | - | 1320 | WP_022557736.1 | right-handed parallel beta-helix repeat-containing protein | - |
| DGN07_RS22700 (DGN07_23680) | 23286..24140 | - | 855 | WP_022557737.1 | DNA topoisomerase | - |
| DGN07_RS22705 (DGN07_23685) | 24142..24390 | - | 249 | WP_033481882.1 | hypothetical protein | - |
| DGN07_RS22710 (DGN07_23690) | 24463..24702 | - | 240 | WP_005997461.1 | hypothetical protein | - |
| DGN07_RS22715 (DGN07_23695) | 24713..24967 | - | 255 | WP_234349310.1 | hypothetical protein | - |
| DGN07_RS22720 (DGN07_23700) | 25092..26444 | - | 1353 | WP_022557738.1 | TrbI/VirB10 family protein | - |
| DGN07_RS22725 (DGN07_23705) | 26460..27452 | - | 993 | WP_017164024.1 | P-type conjugative transfer protein TrbG | - |
| DGN07_RS22730 (DGN07_23710) | 27479..27730 | - | 252 | WP_022557739.1 | type IV secretion system protein | - |
| DGN07_RS22735 (DGN07_23720) | 27823..28912 | - | 1090 | Protein_32 | IS3 family transposase ISXac2 | Transposase |
| DGN07_RS22740 (DGN07_23730) | 29298..29687 | - | 390 | WP_022557740.1 | hypothetical protein | - |
| DGN07_RS22745 (DGN07_23735) | 30154..30600 | - | 447 | WP_022557741.1 | avidin/streptavidin family protein | - |
| DGN07_RS22750 (DGN07_23740) | 30930..31214 | + | 285 | WP_017154819.1 | hypothetical protein | - |
| DGN07_RS22755 (DGN07_23745) | 31380..31919 | - | 540 | WP_022557742.1 | plasmid pRiA4b ORF-3 family protein | - |
| DGN07_RS22760 (DGN07_23750) | 31933..32442 | - | 510 | WP_022557743.1 | hypothetical protein | - |
| DGN07_RS23140 (DGN07_23755) | 32439..34490 | - | 2052 | WP_022557744.1 | Conjugal transfer protein TraG | VF |
| DGN07_RS22770 (DGN07_23760) | 34495..37449 | - | 2955 | WP_022557745.1 | hypothetical protein | Relaxase |
| DGN07_RS22775 (DGN07_23765) | 37748..38338 | - | 591 | WP_052757094.1 | Type IV secretion system protein virB1 | VF |
| DGN07_RS22780 (DGN07_23770) | 38331..38927 | - | 597 | WP_080720968.1 | S26 family signal peptidase | - |
| DGN07_RS22785 (DGN07_23775) | 38932..39396 | - | 465 | WP_022557748.1 | DUF2840 domain-containing protein | - |
| DGN07_RS22790 (DGN07_23780) | 39736..40071 | - | 336 | WP_022557749.1 | hypothetical protein | - |
| DGN07_RS22795 (DGN07_23785) | 40068..40706 | - | 639 | WP_017162872.1 | ParA family partition ATPase | - |
| DGN07_RS22800 (DGN07_23790) | 40927..41115 | + | 189 | WP_234706489.1 | hypothetical protein | - |
| DGN07_RS22805 (DGN07_23795) | 41724..42545 | - | 822 | WP_022557750.1 | hypothetical protein | - |
| DGN07_RS22810 (DGN07_23800) | 42899..43483 | - | 585 | WP_022557751.1 | DUF6012 family protein | - |
| DGN07_RS22815 (DGN07_23805) | 43595..43939 | - | 345 | WP_022557752.1 | hypothetical protein | - |
| DGN07_RS22820 (DGN07_23810) | 44167..44394 | - | 228 | WP_022557753.1 | hypothetical protein | - |
| DGN07_RS22825 (DGN07_23815) | 44446..44718 | - | 273 | WP_022557754.1 | hypothetical protein | - |
| DGN07_RS22830 (DGN07_23825) | 44975..48991 | + | 4017 | WP_215825281.1 | type III secretion system effector avirulence protein AvrBs3 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|