MGE detailed information
MGE type: IScluster/Tn MGE length: 8967 bp
Accession: NZ_CP029265 Location: 11716..20682 Organism: Xanthomonas citri pv. fuscans strain PR8F Replicon: plasmid unnameda
Accession: NZ_CP029265 Location: 11716..20682 Organism: Xanthomonas citri pv. fuscans strain PR8F Replicon: plasmid unnameda
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DGN16_RS22465 (DGN16_23455) | 7076..7537 | - | 462 | WP_039731445.1 | hypothetical protein | - |
| DGN16_RS22470 (DGN16_23460) | 7716..8573 | - | 858 | WP_033481873.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| DGN16_RS22475 (DGN16_23465) | 8566..9480 | - | 915 | WP_022557729.1 | hypothetical protein | - |
| DGN16_RS22480 | 10163..10267 | + | 105 | Protein_11 | type III secretion system effector protein | - |
| DGN16_RS22485 (DGN16_23475) | 10402..11454 | + | 1053 | WP_022557730.1 | type III secretion system YopJ family effector AvrBsT | - |
| DGN16_RS22490 (DGN16_23480) | 11716..12942 | + | 1227 | WP_011345585.1 | IS256 family transposase ISXax1 | Transposase |
| DGN16_RS22495 (DGN16_23485) | 12955..13362 | - | 408 | WP_040965051.1 | hypothetical protein | - |
| DGN16_RS22500 (DGN16_23495) | 14075..14323 | - | 249 | WP_042826723.1 | hypothetical protein | - |
| DGN16_RS22505 (DGN16_23500) | 14413..15371 | - | 959 | Protein_16 | IS3 family transposase ISXcd1 | Transposase |
| DGN16_RS22510 (DGN16_23505) | 15404..18433 | - | 3030 | WP_022560486.1 | Tn3 family transposase ISPsy42 | Transposase |
| DGN16_RS22515 (DGN16_23510) | 18430..19023 | - | 594 | WP_022560487.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| DGN16_RS22520 (DGN16_23515) | 19235..19489 | + | 255 | WP_022557731.1 | plasmid stability protein | Antitoxin Detail |
| DGN16_RS22525 (DGN16_23520) | 19486..19902 | + | 417 | WP_022557732.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| DGN16_RS22530 (DGN16_23525) | 19916..20470 | + | 555 | WP_033482006.1 | plasmid pRiA4b ORF-3 family protein | - |
| DGN16_RS22535 (DGN16_23530) | 20545..20682 | - | 138 | Protein_22 | IS3 family transposase ISXcd1 | Transposase |
| DGN16_RS22540 (DGN16_23535) | 20731..21279 | - | 549 | WP_022557734.1 | DNA topoisomerase | - |
| DGN16_RS22545 (DGN16_23540) | 21434..22726 | - | 1293 | WP_033481893.1 | M12 family metallo-peptidase | - |
| DGN16_RS22550 (DGN16_23545) | 22853..24172 | - | 1320 | WP_022557736.1 | right-handed parallel beta-helix repeat-containing protein | - |
| DGN16_RS22555 (DGN16_23555) | 24547..25401 | - | 855 | WP_022557737.1 | DNA topoisomerase | - |
| DGN16_RS22560 (DGN16_23560) | 25403..25651 | - | 249 | WP_033481882.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|