MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 152940 bp
Accession: NZ_CP029249 Location: 1..152940 Organism: Salmonella enterica subsp. enterica serovar Thompson strain HFCDC-SM-846 Replicon: plasmid p846
Accession: NZ_CP029249 Location: 1..152940 Organism: Salmonella enterica subsp. enterica serovar Thompson strain HFCDC-SM-846 Replicon: plasmid p846
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DBR05_RS24305 () | 170..547 | + | 378 | WP_001125905.1 | hypothetical protein | - |
| DBR05_RS25465 () | 540..821 | + | 282 | WP_000044824.1 | hypothetical protein | - |
| DBR05_RS24315 () | 796..1470 | + | 675 | WP_000344151.1 | thymidylate kinase | - |
| DBR05_RS24320 () | 1538..1969 | + | 432 | WP_005507681.1 | hypothetical protein | - |
| DBR05_RS24325 () | 1975..2286 | + | 312 | WP_002210541.1 | hypothetical protein | - |
| DBR05_RS24330 () | 2295..2795 | + | 501 | WP_000647189.1 | hypothetical protein | - |
| DBR05_RS24335 () | 2799..4226 | + | 1428 | WP_000936896.1 | DNA cytosine methyltransferase | - |
| DBR05_RS24340 () | 4226..4882 | + | 657 | WP_000268551.1 | hypothetical protein | - |
| DBR05_RS24345 () | 5088..5306 | + | 219 | WP_000362482.1 | hypothetical protein | - |
| DBR05_RS24350 () | 5400..6017 | + | 618 | WP_000464631.1 | hypothetical protein | - |
| DBR05_RS24360 () | 6229..6528 | + | 300 | WP_000542259.1 | hypothetical protein | - |
| DBR05_RS24365 () | 6620..7108 | - | 489 | WP_000468105.1 | hypothetical protein | - |
| DBR05_RS24370 () | 7123..9315 | - | 2193 | WP_000366822.1 | DNA topoisomerase 3 | - |
| DBR05_RS24375 () | 9315..9548 | - | 234 | WP_001191892.1 | hypothetical protein | - |
| DBR05_RS24380 () | 9530..10147 | - | 618 | WP_001249396.1 | hypothetical protein | - |
| DBR05_RS24385 () | 10315..13287 | + | 2973 | WP_064986968.1 | TraI domain-containing protein | - |
| DBR05_RS24390 () | 13284..15149 | + | 1866 | WP_000178857.1 | conjugative transfer system coupling protein TraD | - |
| DBR05_RS24395 () | 15160..15744 | + | 585 | WP_000332868.1 | hypothetical protein | - |
| DBR05_RS24400 () | 15701..16330 | + | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| DBR05_RS24405 () | 16340..16786 | + | 447 | WP_000122507.1 | hypothetical protein | - |
| DBR05_RS24410 () | 16796..17173 | + | 378 | WP_000869297.1 | hypothetical protein | - |
| DBR05_RS24415 () | 17173..17835 | + | 663 | WP_001231464.1 | hypothetical protein | - |
| DBR05_RS24420 () | 18159..18536 | + | 378 | WP_001326174.1 | hypothetical protein | - |
| DBR05_RS24425 () | 18681..18962 | + | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| DBR05_RS24430 () | 18959..19585 | + | 627 | WP_001049717.1 | hypothetical protein | - |
| DBR05_RS24435 () | 19569..20486 | + | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| DBR05_RS24440 () | 20486..21799 | + | 1314 | WP_024131605.1 | conjugal transfer protein TraB | - |
| DBR05_RS24445 () | 21796..22374 | + | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| DBR05_RS24450 () | 22378..22770 | + | 393 | WP_000479535.1 | hypothetical protein | - |
| DBR05_RS24455 () | 23055..24317 | + | 1263 | WP_000608644.1 | IS1380-like element ISEc9 family transposase | - |
| DBR05_RS24460 () | 24640..25785 | + | 1146 | WP_000976514.1 | class C beta-lactamase CMY-2 | - |
| DBR05_RS24465 () | 25879..26412 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| DBR05_RS24470 () | 26409..26726 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| DBR05_RS24480 () | 27454..32940 | + | 5487 | WP_000606835.1 | DUF4165 domain-containing protein | - |
| DBR05_RS24485 () | 33089..33796 | + | 708 | WP_001259346.1 | DsbC family protein | - |
| DBR05_RS24490 () | 33793..36240 | + | 2448 | WP_000637384.1 | type IV secretion system protein TraC | - |
| DBR05_RS24495 () | 36255..36572 | + | 318 | WP_000351984.1 | hypothetical protein | - |
| DBR05_RS24500 () | 36569..37099 | + | 531 | WP_001010740.1 | S26 family signal peptidase | - |
| DBR05_RS24505 () | 37062..38327 | + | 1266 | WP_001447719.1 | conjugal transfer protein TraW | - |
| DBR05_RS24510 () | 38324..38995 | + | 672 | WP_000575345.1 | EAL domain-containing protein | - |
| DBR05_RS24515 () | 38992..39999 | + | 1008 | WP_000983282.1 | TraU family protein | - |
| DBR05_RS24520 () | 40103..42907 | + | 2805 | Protein_41 | conjugal transfer mating pair stabilization protein TraN | - |
| DBR05_RS24525 () | 42961..43665 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| DBR05_RS24530 () | 43722..44027 | - | 306 | Protein_43 | transposase | - |
| DBR05_RS24535 () | 44422..45078 | + | 657 | WP_001516695.1 | quinolone resistance pentapeptide repeat protein QnrS1 | - |
| DBR05_RS24540 () | 45397..45825 | - | 429 | Protein_45 | recombinase family protein | - |
| DBR05_RS24545 () | 45858..47249 | - | 1392 | WP_001493761.1 | ISKra4-like element ISKpn19 family transposase | - |
| DBR05_RS24550 () | 47286..47858 | - | 573 | WP_001493762.1 | recombinase family protein | - |
| DBR05_RS24555 () | 47995..48585 | - | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| DBR05_RS24560 () | 48709..51696 | - | 2988 | WP_072756842.1 | Tn3 family transposase | - |
| DBR05_RS24565 () | 51864..52499 | + | 636 | WP_000470623.1 | recombinase family protein | - |
| DBR05_RS24570 () | 52527..53363 | - | 837 | WP_071686688.1 | S-formylglutathione hydrolase | - |
| DBR05_RS24575 () | 53429..53827 | - | 399 | WP_000235177.1 | VOC family protein | - |
| DBR05_RS24580 () | 53869..54978 | - | 1110 | WP_000842086.1 | S-(hydroxymethyl)glutathione dehydrogenase | - |
| DBR05_RS24585 () | 55009..55284 | - | 276 | WP_001141270.1 | formaldehyde-responsive transcriptional repressor FrmR | - |
| DBR05_RS24590 () | 55581..56936 | - | 1356 | Protein_55 | Tn3-like element TnAs1 family transposase | - |
| DBR05_RS24595 () | 56940..57500 | - | 561 | WP_001161490.1 | recombinase family protein | - |
| DBR05_RS24600 () | 57700..58005 | - | 306 | WP_000130000.1 | PadR family transcriptional regulator | - |
| DBR05_RS24605 () | 58016..59221 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| DBR05_RS24610 () | 59377..59580 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| DBR05_RS24620 () | 59708..60547 | - | 840 | WP_000259031.1 | sulfonamide-resistant dihydropteroate synthase Sul1 | - |
| DBR05_RS24625 () | 60541..60888 | - | 348 | WP_000679427.1 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| DBR05_RS24630 () | 61052..61843 | - | 792 | WP_001206356.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2 | - |
| DBR05_RS24635 () | 61849..62139 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| DBR05_RS24640 () | 62251..62748 | - | 498 | WP_001083725.1 | trimethoprim-resistant dihydrofolate reductase DfrA12 | - |
| DBR05_RS25470 () | 62893..63192 | + | 300 | Protein_65 | class 1 integron integrase IntI1 | - |
| DBR05_RS25475 () | 63193..63546 | + | 354 | Protein_66 | chaperonin GroEL | - |
| DBR05_RS24650 () | 63773..65305 | + | 1533 | WP_001747814.1 | IS91 family transposase | - |
| DBR05_RS24660 () | 65562..65930 | + | 369 | WP_001470701.1 | mechanosensitive ion channel | - |
| DBR05_RS24665 () | 65958..67499 | - | 1542 | WP_109638756.1 | fluoroquinolone efflux MFS transporter QepA8 | - |
| DBR05_RS24670 () | 67894..68907 | + | 1014 | WP_000845039.1 | class 1 integron integrase IntI1 | - |
| DBR05_RS25365 () | 69110..69460 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| DBR05_RS25370 () | 69480..69545 | + | 66 | Protein_72 | EAL domain-containing protein | - |
| DBR05_RS24685 () | 69663..70427 | + | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| DBR05_RS24700 () | 70920..71504 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| DBR05_RS24705 () | 71504..72742 | - | 1239 | WP_000004159.1 | MFS transporter | - |
| DBR05_RS24710 () | 72739..73644 | - | 906 | WP_000219391.1 | Mph(A) family macrolide 2'-phosphotransferase | - |
| DBR05_RS24720 () | 73766..74470 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| DBR05_RS24725 () | 74777..74956 | + | 180 | Protein_78 | helix-turn-helix transcriptional regulator | - |
| DBR05_RS24730 () | 75021..75725 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| DBR05_RS24735 () | 75940..76437 | - | 498 | WP_000062185.1 | hypothetical protein | - |
| DBR05_RS24740 () | 76440..76928 | - | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| DBR05_RS24745 () | 77025..77360 | + | 336 | WP_000683476.1 | hypothetical protein | - |
| DBR05_RS24750 () | 77375..77845 | - | 471 | WP_001281821.1 | hypothetical protein | - |
| DBR05_RS24755 () | 77838..78209 | - | 372 | WP_000516916.1 | hypothetical protein | - |
| DBR05_RS24760 () | 78220..78414 | - | 195 | WP_000343597.1 | hypothetical protein | - |
| DBR05_RS24770 () | 78755..79303 | - | 549 | WP_001061574.1 | transcriptional regulator | - |
| DBR05_RS24775 () | 79466..79816 | + | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DBR05_RS24780 () | 79821..80123 | + | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| DBR05_RS24785 () | 80150..80443 | - | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| DBR05_RS24790 () | 80531..80803 | - | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| DBR05_RS24795 () | 80861..81388 | - | 528 | WP_001236377.1 | thermonuclease family protein | - |
| DBR05_RS24805 () | 81619..82476 | - | 858 | WP_001167032.1 | hypothetical protein | - |
| DBR05_RS24810 () | 82463..82693 | - | 231 | WP_000972663.1 | hypothetical protein | - |
| DBR05_RS24815 () | 82693..83211 | - | 519 | WP_000210756.1 | nitrite reductase | - |
| DBR05_RS24820 () | 83208..83654 | - | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| DBR05_RS24825 () | 83654..84013 | - | 360 | WP_000422768.1 | hypothetical protein | - |
| DBR05_RS24830 () | 84070..84498 | - | 429 | WP_000591074.1 | hypothetical protein | - |
| DBR05_RS24835 () | 84532..85392 | - | 861 | WP_000139698.1 | DsbA family protein | - |
| DBR05_RS24840 () | 85408..86367 | - | 960 | WP_000829616.1 | S49 family peptidase | - |
| DBR05_RS24845 () | 86367..87221 | - | 855 | WP_061602450.1 | hypothetical protein | - |
| DBR05_RS24850 () | 87226..87519 | - | 294 | WP_001370730.1 | hypothetical protein | - |
| DBR05_RS24855 () | 87530..88003 | - | 474 | WP_000057877.1 | hypothetical protein | - |
| DBR05_RS24860 () | 88100..88621 | - | 522 | WP_000805800.1 | hypothetical protein | - |
| DBR05_RS24865 () | 88624..89145 | - | 522 | WP_000393785.1 | hypothetical protein | - |
| DBR05_RS24870 () | 89150..89758 | - | 609 | WP_000849071.1 | hypothetical protein | - |
| DBR05_RS24875 () | 90027..91142 | + | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| DBR05_RS24880 () | 91160..91594 | + | 435 | WP_000883925.1 | hypothetical protein | - |
| DBR05_RS24895 () | 92631..93731 | - | 1101 | WP_000350011.1 | plasmid replication protein | - |
| DBR05_RS24900 () | 93716..94003 | - | 288 | WP_000127321.1 | hypothetical protein | - |
| DBR05_RS24905 () | 94008..94547 | - | 540 | WP_001447712.1 | hypothetical protein | - |
| DBR05_RS24910 () | 95046..96029 | + | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| DBR05_RS24915 () | 96046..96339 | + | 294 | WP_000919078.1 | hypothetical protein | - |
| DBR05_RS24920 () | 96341..96760 | + | 420 | WP_000651490.1 | H-NS histone family protein | - |
| DBR05_RS24925 () | 96820..97371 | - | 552 | WP_001020646.1 | hypothetical protein | - |
| DBR05_RS24930 () | 97368..97976 | - | 609 | WP_000891157.1 | hypothetical protein | - |
| DBR05_RS24935 () | 97987..98520 | - | 534 | WP_032064504.1 | transglycosylase SLT domain-containing protein | - |
| DBR05_RS24940 () | 98520..98792 | - | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| DBR05_RS24945 () | 99508..99870 | + | 363 | WP_000683483.1 | hypothetical protein | - |
| DBR05_RS24950 () | 99908..103522 | - | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| DBR05_RS24955 () | 103535..104968 | - | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| DBR05_RS24960 () | 104970..106010 | - | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| DBR05_RS24965 () | 106121..107632 | - | 1512 | WP_000811656.1 | UvrD-helicase domain-containing protein | - |
| DBR05_RS24975 () | 107919..108959 | - | 1041 | WP_000101568.1 | DNA-binding protein | - |
| DBR05_RS24980 () | 109112..109987 | - | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| DBR05_RS24985 () | 110314..110805 | - | 492 | WP_000139717.1 | hypothetical protein | - |
| DBR05_RS24990 () | 110802..111671 | - | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| DBR05_RS24995 () | 111676..112686 | - | 1011 | WP_000543934.1 | tyrosine-type recombinase/integrase | - |
| DBR05_RS25000 () | 112689..113225 | - | 537 | WP_000949433.1 | hypothetical protein | - |
| DBR05_RS25010 () | 113524..113805 | - | 282 | WP_000575657.1 | hypothetical protein | - |
| DBR05_RS25015 () | 114075..114677 | + | 603 | WP_000278322.1 | hypothetical protein | - |
| DBR05_RS25020 () | 114693..115145 | - | 453 | Protein_131 | hypothetical protein | - |
| DBR05_RS25025 () | 115316..115756 | - | 441 | WP_001326394.1 | hypothetical protein | - |
| DBR05_RS25030 () | 115728..119981 | - | 4254 | WP_001257735.1 | RHS domain-containing protein | - |
| DBR05_RS25040 () | 120114..120839 | - | 726 | WP_000988731.1 | hypothetical protein | - |
| DBR05_RS25045 () | 120953..121327 | - | 375 | WP_000868820.1 | hypothetical protein | - |
| DBR05_RS25395 () | 121448..121564 | - | 117 | WP_000338626.1 | hypothetical protein | - |
| DBR05_RS25050 () | 121574..121693 | - | 120 | Protein_137 | permease | - |
| DBR05_RS25055 () | 121970..122974 | - | 1005 | WP_000427623.1 | IS110-like element IS4321 family transposase | - |
| DBR05_RS25060 () | 123074..123508 | - | 435 | WP_000414383.1 | mercury resistance transcriptional regulator MerR | - |
| DBR05_RS25065 () | 123580..123930 | + | 351 | WP_001294666.1 | mercuric transport protein MerT | - |
| DBR05_RS25070 () | 123946..124221 | + | 276 | WP_000732290.1 | mercury resistance system periplasmic binding protein MerP | - |
| DBR05_RS25075 () | 124293..125978 | + | 1686 | WP_000149288.1 | mercury(II) reductase | - |
| DBR05_RS25080 () | 125993..126631 | + | 639 | WP_000761850.1 | organomercurial lyase MerB | - |
| DBR05_RS25085 () | 126743..127108 | + | 366 | WP_000995361.1 | mercury resistance co-regulator MerD | - |
| DBR05_RS25090 () | 127105..127341 | + | 237 | WP_001087810.1 | broad-spectrum mercury transporter MerE | - |
| DBR05_RS25095 () | 127338..128327 | + | 990 | WP_001276635.1 | DUF3330 domain-containing protein | - |
| DBR05_RS25100 () | 128537..129241 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| DBR05_RS25105 () | 129295..130833 | - | 1539 | Protein_148 | Tn3-like element Tn3 family transposase | - |
| DBR05_RS25110 () | 130997..131428 | + | 432 | Protein_149 | recombinase family protein | - |
| DBR05_RS25115 () | 131480..132184 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| DBR05_RS25120 () | 132249..133499 | - | 1251 | Protein_151 | transposase | - |
| DBR05_RS25130 () | 133574..134242 | - | 669 | WP_001300294.1 | EAL domain-containing protein | - |
| DBR05_RS25135 () | 134278..134514 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| DBR05_RS25140 () | 134511..134873 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| DBR05_RS25145 () | 134891..135400 | - | 510 | Protein_155 | hypothetical protein | - |
| DBR05_RS25150 () | 135549..136409 | - | 861 | WP_000027057.1 | class A broad-spectrum beta-lactamase TEM-1 | - |
| DBR05_RS25480 () | 136592..136726 | - | 135 | Protein_157 | helix-turn-helix domain-containing protein | - |
| DBR05_RS25160 () | 136790..137494 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| DBR05_RS25165 () | 137528..138020 | - | 493 | Protein_159 | hypothetical protein | - |
| DBR05_RS25170 () | 138127..138864 | + | 738 | WP_001366550.1 | recombinase family protein | - |
| DBR05_RS25175 () | 138861..139085 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| DBR05_RS25180 () | 139296..140789 | + | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| DBR05_RS25185 () | 140820..141704 | + | 885 | WP_021598067.1 | DUF3363 domain-containing protein | - |
| DBR05_RS25190 () | 141921..143135 | + | 1215 | WP_023300759.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| DBR05_RS25195 () | 143163..143468 | + | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| DBR05_RS25200 () | 143580..143768 | + | 189 | Protein_166 | IS91 family transposase | - |
| DBR05_RS25205 () | 143735..144934 | - | 1200 | WP_032153701.1 | tetracycline efflux MFS transporter Tet(A) | - |
| DBR05_RS25210 () | 145040..145690 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| DBR05_RS25215 () | 145722..145964 | - | 243 | WP_000844627.1 | transposase | - |
| DBR05_RS25225 () | 146270..147106 | - | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| DBR05_RS25230 () | 147106..147909 | - | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| DBR05_RS25235 () | 147970..148785 | - | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| DBR05_RS25245 () | 149092..149403 | + | 312 | WP_000338945.1 | hypothetical protein | - |
| DBR05_RS25250 () | 149577..150362 | + | 786 | WP_001151304.1 | ParA family protein | - |
| DBR05_RS25255 () | 150366..151547 | + | 1182 | WP_001207227.1 | ParB/RepB/Spo0J family partition protein | - |
| DBR05_RS25260 () | 151596..151868 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| DBR05_RS25265 () | 151921..152556 | - | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| DBR05_RS25405 () | 152648..152791 | - | 144 | WP_000939033.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|