MGE detailed information
MGE type: Mobilizable plasmid MGE length: 139629 bp
Accession: NZ_CP029244 Location: 1..139629 Organism: Escherichia coli strain ECCRA-119 Replicon: plasmid pTB202
Accession: NZ_CP029244 Location: 1..139629 Organism: Escherichia coli strain ECCRA-119 Replicon: plasmid pTB202
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7235_RS26280 () | 1..426 | + | 426 | WP_109138277.1 | putative cyclic di-GMP phosphodiesterase PdeI | VF |
| C7235_RS26285 () | 416..1762 | + | 1347 | WP_158666848.1 | GGDEF domain-containing protein | - |
| C7235_RS26290 () | 1809..2505 | - | 697 | Protein_2 | IS1 family transposase | - |
| C7235_RS26300 () | 2586..4691 | + | 2106 | WP_050489276.1 | UDP-forming cellulose synthase catalytic subunit | - |
| C7235_RS26305 () | 4755..6905 | + | 2151 | WP_001351999.1 | cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB | - |
| C7235_RS26315 () | 7649..8995 | + | 1347 | WP_059039599.1 | group II intron reverse transcriptase/maturase | - |
| C7235_RS26325 () | 9182..9568 | + | 387 | Protein_6 | IS200/IS605 family transposase | - |
| C7235_RS26335 () | 10035..13508 | + | 3474 | WP_104692566.1 | cellulose biosynthesis protein BcsC | - |
| C7235_RS26345 () | 13708..14291 | + | 584 | Protein_8 | IS1 family transposase | - |
| C7235_RS26350 () | 14383..15611 | + | 1229 | WP_152921225.1 | IS3 family transposase IS2 | Transposase |
| C7235_RS26355 () | 15619..15759 | + | 141 | Protein_10 | L-threonine dehydrogenase | - |
| C7235_RS26360 () | 15914..16648 | - | 735 | WP_000578338.1 | helix-turn-helix domain-containing protein | - |
| C7235_RS26365 () | 16738..16929 | + | 192 | Protein_12 | PerC family transcriptional regulator | - |
| C7235_RS26370 () | 16945..17642 | - | 698 | Protein_13 | IS1 family transposase | - |
| C7235_RS26395 () | 18341..19438 | + | 1098 | WP_072647222.1 | hypothetical protein | - |
| C7235_RS26400 () | 19511..20017 | + | 507 | WP_032203676.1 | 3'-phosphatase 5'-polynucleotide kinase phage-associated protein | - |
| C7235_RS26405 () | 20284..23400 | - | 3117 | WP_072647223.1 | HsdR family type I site-specific deoxyribonuclease | - |
| C7235_RS26410 () | 23522..24754 | - | 1233 | WP_072731919.1 | restriction endonuclease subunit S | - |
| C7235_RS26415 () | 24751..26307 | - | 1557 | WP_001568002.1 | type I restriction-modification system subunit M | - |
| C7235_RS26420 () | 26490..26711 | + | 222 | WP_072731917.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| C7235_RS26425 () | 26711..27091 | + | 381 | WP_072731915.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| C7235_RS26430 () | 27096..27275 | + | 180 | WP_000113018.1 | hypothetical protein | - |
| C7235_RS26435 () | 27303..28279 | + | 977 | Protein_22 | DUF968 domain-containing protein | - |
| C7235_RS26440 () | 28295..28992 | - | 698 | Protein_23 | IS1 family transposase | - |
| C7235_RS26450 () | 29184..29303 | + | 120 | WP_001376634.1 | ash family protein | - |
| C7235_RS26455 () | 29322..29543 | + | 222 | WP_072019028.1 | host cell division inhibitor Icd-like protein | - |
| C7235_RS26460 () | 29540..30655 | + | 1116 | WP_033551397.1 | phage antirepressor KilAC domain-containing protein | - |
| C7235_RS26465 () | 30688..31539 | - | 852 | WP_000611664.1 | hypothetical protein | - |
| C7235_RS26470 () | 31650..31859 | - | 210 | WP_000874156.1 | hypothetical protein | - |
| C7235_RS26480 () | 32047..33027 | + | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| C7235_RS26495 () | 33664..33885 | + | 222 | WP_000542338.1 | hypothetical protein | - |
| C7235_RS26500 () | 33893..34924 | + | 1032 | WP_000067537.1 | site-specific integrase | - |
| C7235_RS26505 () | 34975..35286 | + | 312 | WP_001224232.1 | hypothetical protein | - |
| C7235_RS26510 () | 35532..36092 | + | 561 | WP_000848370.1 | Ref family protein | - |
| C7235_RS26515 () | 36179..36928 | + | 750 | WP_104692568.1 | DUF4145 domain-containing protein | - |
| C7235_RS26520 () | 37084..37725 | + | 642 | WP_109138278.1 | maturation control protein | - |
| C7235_RS26525 () | 37828..38955 | + | 1128 | WP_071447930.1 | RelA/SpoT domain-containing protein | - |
| C7235_RS26530 () | 38992..39240 | - | 249 | WP_000747845.1 | hypothetical protein | - |
| C7235_RS26535 () | 39237..39677 | - | 441 | WP_000224043.1 | hypothetical protein | - |
| C7235_RS26540 () | 39797..40959 | + | 1163 | WP_085947598.1 | IS3 family transposase ISEc17 | Transposase |
| C7235_RS26550 () | 41214..41771 | - | 558 | WP_024175649.1 | lysozyme | - |
| C7235_RS26555 () | 41941..42429 | + | 489 | WP_000068862.1 | single-stranded DNA-binding protein | - |
| C7235_RS26560 () | 42663..43775 | - | 1113 | WP_089571554.1 | porin OmpC | - |
| C7235_RS26565 () | 44517..44828 | - | 312 | WP_001165933.1 | hypothetical protein | - |
| C7235_RS26570 () | 44818..46095 | - | 1278 | WP_104692586.1 | ddrB domain protein | - |
| C7235_RS26580 () | 46370..47067 | + | 698 | Protein_45 | IS1 family transposase | - |
| C7235_RS26585 () | 47541..51056 | + | 3516 | WP_089571546.1 | Outer membrane protein IcsA autotransporter | VF |
| C7235_RS26590 () | 51231..51436 | - | 206 | Protein_47 | hypothetical protein | - |
| C7235_RS26595 () | 51426..51626 | + | 201 | WP_000896262.1 | DUF839 domain-containing protein | - |
| C7235_RS26600 () | 51916..52203 | - | 288 | WP_000222771.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C7235_RS26605 () | 52200..52451 | - | 252 | WP_001139206.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| C7235_RS26615 () | 53064..55925 | + | 2862 | Protein_51 | helicase | - |
| C7235_RS26620 () | 55932..56629 | - | 698 | Protein_52 | IS1 family transposase | - |
| C7235_RS26630 () | 56735..57136 | - | 402 | Protein_53 | IS30 family transposase IS30D | Transposase |
| C7235_RS26635 () | 57234..58985 | - | 1752 | Protein_54 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| C7235_RS26640 () | 58974..59381 | + | 408 | WP_001214976.1 | cysteine hydrolase | - |
| C7235_RS26645 () | 59519..60403 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| C7235_RS26650 () | 60435..61634 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| C7235_RS26655 () | 61740..62390 | + | 651 | WP_038989485.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| C7235_RS27960 () | 62419..62667 | - | 249 | WP_204116133.1 | relaxase | - |
| C7235_RS27965 () | 62647..63018 | - | 372 | Protein_60 | DUF4158 domain-containing protein | - |
| C7235_RS26665 () | 63022..63582 | - | 561 | WP_001161490.1 | recombinase family protein | - |
| C7235_RS27755 () | 63758..64108 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| C7235_RS26675 () | 64311..65324 | - | 1014 | WP_000845039.1 | IS91 family transposase ISAzo26 | Transposase |
| C7235_RS26680 () | 65469..65966 | + | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| C7235_RS26685 () | 66078..66368 | + | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| C7235_RS26690 () | 66374..67165 | + | 792 | WP_001206356.1 | Streptomycin 3''-adenylyltransferase | ARG |
| C7235_RS26695 () | 67329..67676 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| C7235_RS26700 () | 67670..68509 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| C7235_RS26710 () | 68637..68840 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| C7235_RS26715 () | 68996..69691 | + | 696 | Protein_70 | chromate transporter | - |
| C7235_RS26720 () | 69724..72729 | - | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| C7235_RS26725 () | 72893..73450 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| C7235_RS26730 () | 73633..74493 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| C7235_RS26735 () | 74641..75156 | + | 516 | Protein_74 | chromate transporter | - |
| C7235_RS26740 () | 75167..75472 | + | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| C7235_RS27760 () | 75516..75581 | + | 66 | Protein_76 | EAL domain-containing protein | - |
| C7235_RS26750 () | 75699..76463 | + | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| C7235_RS26765 () | 76956..77540 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| C7235_RS26770 () | 77540..78778 | - | 1239 | WP_109138280.1 | MFS transporter | - |
| C7235_RS26775 () | 78775..79680 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| C7235_RS26785 () | 79802..80506 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| C7235_RS26795 () | 80773..82209 | + | 1437 | WP_000105383.1 | glutathione synthase | - |
| C7235_RS26800 () | 83025..83729 | - | 705 | WP_032193599.1 | replication initiation protein | - |
| C7235_RS26805 () | 83759..84463 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| C7235_RS26810 () | 84662..84985 | - | 324 | WP_001175594.1 | helix-turn-helix domain-containing protein | - |
| C7235_RS26815 () | 85090..86127 | + | 1038 | WP_044502555.1 | permease | - |
| C7235_RS26820 () | 86420..87037 | - | 618 | WP_000521603.1 | hypothetical protein | - |
| C7235_RS26825 () | 87229..88785 | - | 1557 | WP_000818556.1 | AAA family ATPase | - |
| C7235_RS26830 () | 89048..89638 | - | 591 | WP_000194575.1 | hypothetical protein | - |
| C7235_RS26835 () | 89638..89895 | - | 258 | WP_000343085.1 | hypothetical protein | - |
| C7235_RS26840 () | 90249..92387 | + | 2139 | WP_000350638.1 | AAA family ATPase | - |
| C7235_RS26845 () | 92549..92965 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C7235_RS26850 () | 92962..93192 | - | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| C7235_RS26860 () | 93488..93778 | + | 291 | WP_000111771.1 | hypothetical protein | - |
| C7235_RS26865 () | 93768..94667 | + | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| C7235_RS26870 () | 94717..96942 | - | 2226 | WP_000698737.1 | phage T7 exclusion protein | - |
| C7235_RS26875 () | 96944..98032 | - | 1089 | WP_000952217.1 | transcriptional repressor PifC | - |
| C7235_RS26885 () | 98584..98934 | + | 351 | WP_000493378.1 | hypothetical protein | - |
| C7235_RS26890 () | 98985..99728 | + | 744 | WP_000129823.1 | hypothetical protein | - |
| C7235_RS26895 () | 99725..100501 | + | 777 | WP_000015958.1 | site-specific integrase | - |
| C7235_RS26905 () | 100753..101457 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| C7235_RS26910 () | 101792..102184 | + | 393 | WP_000084745.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| C7235_RS26915 () | 102504..102890 | - | 387 | WP_063102497.1 | bleomycin binding protein | - |
| C7235_RS26925 () | 103084..103788 | - | 705 | WP_109138281.1 | IS6 family transposase | - |
| C7235_RS26930 () | 103856..105154 | + | 1299 | Protein_105 | Tn3 family transposase TnpA_Tn3 | Transposase |
| C7235_RS26935 () | 105188..105943 | - | 756 | Protein_106 | IS30 family transposase IS30D | Transposase |
| C7235_RS26945 () | 106008..106892 | + | 885 | Protein_107 | IS3 family transposase ISEc52 | Transposase |
| C7235_RS26950 () | 106907..107338 | - | 432 | Protein_108 | IncHI-type conjugal transfer protein TrhH | - |
| C7235_RS26955 () | 107328..108374 | - | 1047 | WP_077478202.1 | thioredoxin family protein | - |
| C7235_RS26965 () | 108602..109582 | + | 981 | WP_000019402.1 | IS5 family transposase IS5D | Transposase |
| C7235_RS26975 () | 110188..110699 | - | 512 | Protein_111 | hypothetical protein | - |
| C7235_RS26980 () | 110702..111500 | - | 799 | Protein_112 | trhR | - |
| C7235_RS26985 () | 112258..112743 | + | 486 | WP_000071636.1 | hypothetical protein | - |
| C7235_RS26990 () | 112740..113462 | + | 723 | WP_000133023.1 | hypothetical protein | - |
| C7235_RS26995 () | 113473..114456 | + | 984 | Protein_115 | hypothetical protein | Relaxase |
| C7235_RS27000 () | 114511..115208 | + | 698 | Protein_116 | IS1 family transposase | - |
| C7235_RS27970 () | 115202..115765 | - | 564 | WP_174213574.1 | hypothetical protein | - |
| C7235_RS27015 () | 115801..116616 | - | 816 | WP_000041769.1 | hypothetical protein | - |
| C7235_RS27020 () | 116626..117897 | - | 1272 | WP_000459149.1 | hypothetical protein | - |
| C7235_RS27030 () | 119243..119551 | - | 309 | Protein_121 | hypothetical protein | - |
| C7235_RS27035 () | 119611..121317 | - | 1707 | WP_000067707.1 | hypothetical protein | - |
| C7235_RS27040 () | 121543..122544 | - | 1002 | WP_000038866.1 | ParB/RepB/Spo0J family partition protein | - |
| C7235_RS27045 () | 122561..123757 | - | 1197 | WP_001285362.1 | AAA family ATPase | - |
| C7235_RS27050 () | 123926..124735 | - | 810 | WP_001154687.1 | GIY-YIG nuclease family protein | - |
| C7235_RS27055 () | 125028..125912 | - | 885 | WP_001113742.1 | RepB family plasmid replication initiator protein | - |
| C7235_RS27060 () | 126248..126640 | - | 393 | WP_001281115.1 | hypothetical protein | - |
| C7235_RS27770 () | 126650..126790 | - | 141 | WP_000336812.1 | hypothetical protein | - |
| C7235_RS27065 () | 126816..127238 | - | 423 | WP_000007769.1 | hypothetical protein | - |
| C7235_RS27070 () | 127278..127631 | - | 354 | WP_089586239.1 | hypothetical protein | - |
| C7235_RS27080 () | 130477..131357 | - | 881 | Protein_132 | RepB family plasmid replication initiator protein | - |
| C7235_RS27085 () | 131762..134144 | + | 2383 | Protein_133 | DUF4165 domain-containing protein | - |
| C7235_RS27095 () | 134509..135190 | - | 682 | Protein_134 | IS6 family transposase | - |
| C7235_RS28110 () | 135254..135374 | + | 121 | Protein_135 | IS6 family transposase IS15 | Transposase |
| C7235_RS27105 () | 135484..136234 | - | 751 | Protein_136 | IS21 family transposase IS100kyp | Transposase |
| C7235_RS27110 () | 136237..136839 | - | 603 | Protein_137 | transposase | - |
| C7235_RS27115 () | 136853..137225 | - | 373 | Protein_138 | IS1 family transposase | - |
| C7235_RS27775 () | 137969..138352 | + | 384 | WP_162542030.1 | hypothetical protein | - |
| C7235_RS27125 () | 138653..139597 | + | 945 | WP_109138284.1 | putative cyclic di-GMP phosphodiesterase PdeI | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|