MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 45771 bp
Accession: NZ_CP029178 Location: 1..45771 Organism: Acidibrevibacterium fodinaquatile strain G45-3 Replicon: plasmid unnamed2
Accession: NZ_CP029178 Location: 1..45771 Organism: Acidibrevibacterium fodinaquatile strain G45-3 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DEF76_RS18810 () | 208..747 | + | 540 | WP_114914053.1 | hypothetical protein | - |
| DEF76_RS18825 () | 2563..2802 | + | 240 | WP_114914056.1 | hypothetical protein | - |
| DEF76_RS19585 () | 3329..3478 | - | 150 | WP_162800775.1 | MFS transporter | - |
| DEF76_RS18830 () | 3888..4754 | + | 867 | WP_114914057.1 | replication initiation protein | - |
| DEF76_RS18835 () | 4898..5209 | - | 312 | WP_114914058.1 | hypothetical protein | - |
| DEF76_RS18840 () | 5202..5810 | - | 609 | WP_114914059.1 | ParA family protein | - |
| DEF76_RS18845 () | 6025..6414 | + | 390 | WP_114914060.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DEF76_RS18850 () | 6455..6781 | + | 327 | WP_114914097.1 | helix-turn-helix domain-containing protein | - |
| DEF76_RS18855 () | 6797..7267 | - | 471 | WP_114914061.1 | site-specific integrase | - |
| DEF76_RS18860 () | 7330..10344 | - | 3015 | WP_114914062.1 | Tn3 family transposase TnpA_ISAzs29 | Transposase |
| DEF76_RS18865 () | 10438..11055 | + | 618 | WP_114914063.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| DEF76_RS18870 () | 11108..11392 | + | 285 | WP_114914064.1 | ISAs1 family transposase ISMca6 | Transposase |
| DEF76_RS18875 () | 11717..12277 | - | 561 | Protein_13 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| DEF76_RS18880 () | 12424..15399 | + | 2976 | WP_114914065.1 | Tn3 family transposase TnpA_ISAzs17 | Transposase |
| DEF76_RS18885 () | 15308..16054 | - | 747 | WP_114914066.1 | IS21 family transposase ISRel16 | Transposase |
| DEF76_RS18890 () | 16076..17617 | - | 1542 | WP_114912090.1 | IS21 family transposase ISPsy14 | Transposase |
| DEF76_RS18900 () | 18399..18731 | + | 333 | WP_114914068.1 | hypothetical protein | - |
| DEF76_RS18905 () | 19254..19838 | - | 585 | WP_114911760.1 | ISAs1 family transposase ISMca6 | Transposase |
| DEF76_RS18910 () | 19790..20380 | - | 591 | WP_162800530.1 | ISAs1 family transposase ISMca6 | Transposase |
| DEF76_RS19590 () | 20599..20838 | + | 240 | WP_162800776.1 | hypothetical protein | - |
| DEF76_RS18915 () | 21493..21891 | - | 399 | WP_114914069.1 | type II toxin-antitoxin system VapC family toxin | - |
| DEF76_RS18920 () | 21888..22154 | - | 267 | WP_114914070.1 | transcriptional regulator | - |
| DEF76_RS18925 () | 22750..22968 | + | 219 | WP_162800782.1 | antitoxin MazE family protein | Antitoxin Detail |
| DEF76_RS18930 () | 22965..23330 | + | 366 | WP_114914072.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| DEF76_RS18935 () | 24046..25170 | - | 1125 | WP_114914073.1 | replication initiator protein A | - |
| DEF76_RS18945 () | 25539..26174 | - | 636 | WP_114914075.1 | ParA family protein | - |
| DEF76_RS18950 () | 26510..26884 | + | 375 | WP_114914076.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DEF76_RS18955 () | 26877..27194 | + | 318 | WP_114914077.1 | DNA-binding transcriptional regulator | - |
| DEF76_RS18960 () | 27311..27598 | - | 288 | WP_114914078.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| DEF76_RS18965 () | 27696..28274 | - | 579 | WP_114914079.1 | Tyrosine recombinase XerD | VF |
| DEF76_RS18970 () | 28580..28846 | - | 267 | WP_114914080.1 | WGR domain-containing protein | - |
| DEF76_RS18975 () | 29530..29604 | + | 75 | WP_114914098.1 | pyrroloquinoline quinone precursor peptide PqqA | - |
| DEF76_RS18980 () | 29680..29949 | + | 270 | WP_114914099.1 | pyrroloquinoline quinone biosynthesis peptide chaperone PqqD | - |
| DEF76_RS18985 () | 29918..31057 | + | 1140 | WP_114914081.1 | pyrroloquinoline quinone biosynthesis protein PqqE | - |
| DEF76_RS18990 () | 31254..31694 | + | 441 | WP_114914100.1 | urate hydroxylase PuuD | - |
| DEF76_RS18995 () | 31675..32775 | + | 1101 | WP_114914082.1 | 3-phosphoserine/phosphohydroxythreonine transaminase | - |
| DEF76_RS19000 () | 32900..33607 | + | 708 | WP_162800783.1 | hypothetical protein | - |
| DEF76_RS19005 () | 33613..34791 | + | 1179 | WP_114914084.1 | M48 family metalloprotease | - |
| DEF76_RS19010 () | 35106..35513 | + | 408 | WP_162800777.1 | hypothetical protein | - |
| DEF76_RS19015 () | 35768..36055 | + | 288 | WP_114914086.1 | hypothetical protein | - |
| DEF76_RS19020 () | 36093..37058 | + | 966 | WP_114914087.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| DEF76_RS19025 () | 37206..37976 | - | 771 | WP_162800778.1 | transporter | - |
| DEF76_RS19030 () | 38161..38523 | - | 363 | WP_162800779.1 | heavy-metal-associated domain-containing protein | - |
| DEF76_RS19035 () | 38648..39841 | - | 1194 | WP_114914090.1 | glycosyltransferase family 9 protein | - |
| DEF76_RS19040 () | 40057..41235 | - | 1179 | WP_162800780.1 | MFS transporter | - |
| DEF76_RS19045 () | 41350..41631 | - | 282 | WP_114914092.1 | hypothetical protein | - |
| DEF76_RS19050 () | 41833..42069 | + | 237 | WP_114914093.1 | hypothetical protein | - |
| DEF76_RS19055 () | 42199..42840 | + | 642 | WP_114914094.1 | GTP cyclohydrolase I FolE | - |
| DEF76_RS19060 () | 43003..45495 | - | 2493 | WP_114914095.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|