MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 104594 bp
Accession: NZ_CP029176 Location: 535316..639909 Organism: Acidibrevibacterium fodinaquatile strain G45-3 Replicon: chromosome
Accession: NZ_CP029176 Location: 535316..639909 Organism: Acidibrevibacterium fodinaquatile strain G45-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DEF76_RS02610 () | 532410..532961 | + | 552 | WP_114910992.1 | hypothetical protein | - |
| DEF76_RS02615 () | 532991..533491 | + | 501 | WP_114910993.1 | hypothetical protein | - |
| DEF76_RS02620 () | 533963..534322 | + | 360 | WP_114910994.1 | helix-turn-helix domain-containing protein | - |
| DEF76_RS02625 () | 534319..534957 | + | 639 | WP_114910995.1 | glutaredoxin 2 | - |
| DEF76_RS02635 () | 536820..538001 | + | 1182 | WP_114910997.1 | IS110 family transposase ISRel9 | Transposase |
| DEF76_RS02640 () | 538526..540064 | - | 1539 | WP_114910998.1 | Group II intron-encoded protein LtrA | VF |
| DEF76_RS02645 () | 540456..541208 | - | 753 | WP_114910999.1 | IS21 family transposase ISRel16 | Transposase |
| DEF76_RS02650 () | 541230..542771 | - | 1542 | WP_114911000.1 | IS21 family transposase ISPsy14 | Transposase |
| DEF76_RS02660 () | 543405..545525 | + | 2121 | WP_114911002.1 | ParB N-terminal domain-containing protein | - |
| DEF76_RS02665 () | 545708..546064 | + | 357 | WP_205216162.1 | hypothetical protein | - |
| DEF76_RS02670 () | 546076..546510 | + | 435 | WP_205216084.1 | hypothetical protein | - |
| DEF76_RS02680 () | 548257..548604 | - | 348 | WP_114911005.1 | IS66 family transposase ISAzs20 | Transposase |
| DEF76_RS02685 () | 548601..549026 | - | 426 | WP_114911006.1 | transposase | - |
| DEF76_RS02690 () | 549455..553120 | - | 3666 | WP_205216085.1 | hypothetical protein | - |
| DEF76_RS02695 () | 553605..554030 | - | 426 | WP_114911008.1 | type II toxin-antitoxin system VapC family toxin | - |
| DEF76_RS02700 () | 554027..554269 | - | 243 | WP_114911009.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| DEF76_RS02705 () | 554455..558837 | + | 4383 | WP_114911010.1 | strawberry notch family protein | - |
| DEF76_RS02710 () | 558837..559895 | + | 1059 | WP_114911011.1 | toprim domain-containing protein | - |
| DEF76_RS02720 () | 560214..561149 | + | 936 | WP_114913616.1 | DUF2493 domain-containing protein | - |
| DEF76_RS02725 () | 561229..561483 | + | 255 | WP_114911013.1 | plasmid stabilization protein | Antitoxin Detail |
| DEF76_RS02730 () | 561480..561902 | + | 423 | WP_114911014.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| DEF76_RS02735 () | 561962..564250 | - | 2289 | WP_114911015.1 | hypothetical protein | - |
| DEF76_RS02740 () | 564636..565088 | + | 453 | WP_114913617.1 | hypothetical protein | - |
| DEF76_RS02745 () | 565741..566064 | + | 324 | WP_114911016.1 | DUF736 domain-containing protein | - |
| DEF76_RS02750 () | 566124..566369 | - | 246 | WP_114911017.1 | helix-turn-helix domain-containing protein | - |
| DEF76_RS02755 () | 566535..566792 | + | 258 | WP_114911018.1 | DUF2285 domain-containing protein | - |
| DEF76_RS02765 () | 567120..567728 | + | 609 | WP_114911020.1 | DUF2285 domain-containing protein | - |
| DEF76_RS02770 () | 567862..568143 | + | 282 | WP_114911021.1 | helix-turn-helix domain-containing protein | - |
| DEF76_RS02775 () | 568152..569222 | + | 1071 | WP_114911022.1 | replication initiator protein A | - |
| DEF76_RS02780 () | 569250..570782 | - | 1533 | WP_162800444.1 | IS630 family transposase ISAcma28 | Transposase |
| DEF76_RS02785 () | 570784..571680 | - | 897 | WP_205216078.1 | TniB family NTP-binding protein | - |
| DEF76_RS02790 () | 571677..573347 | - | 1671 | WP_114910933.1 | Transposon Tn7 transposition protein TnsB ; Integrase | Integrase |
| DEF76_RS02795 () | 573344..573955 | - | 612 | WP_205216079.1 | TnsA endonuclease N-terminal domain-containing protein | - |
| DEF76_RS02800 () | 574235..574753 | + | 519 | WP_205216163.1 | DUF2840 domain-containing protein | - |
| DEF76_RS02805 () | 574750..575262 | + | 513 | WP_114911023.1 | S26 family signal peptidase | - |
| DEF76_RS02810 () | 575415..576083 | + | 669 | WP_205216164.1 | hypothetical protein | VF |
| DEF76_RS02815 () | 576331..578088 | + | 1758 | WP_114913619.1 | VirD2 family relaxase/mobilization nuclease | - |
| DEF76_RS02820 () | 578239..579429 | + | 1191 | WP_114911025.1 | acyl-CoA dehydrogenase family protein | - |
| DEF76_RS02825 () | 579625..581604 | + | 1980 | WP_114911026.1 | Conjugal transfer protein TraG | VF |
| DEF76_RS02830 () | 581610..582065 | + | 456 | WP_114911027.1 | CopG family transcriptional regulator | - |
| DEF76_RS02835 () | 582225..582698 | - | 474 | WP_114911028.1 | MarR family transcriptional regulator | - |
| DEF76_RS02840 () | 582763..583242 | + | 480 | WP_114911029.1 | carboxymuconolactone decarboxylase family protein | - |
| DEF76_RS02845 () | 583239..583715 | + | 477 | WP_114911030.1 | GNAT family N-acetyltransferase | - |
| DEF76_RS02850 () | 583737..584381 | + | 645 | WP_205216086.1 | NAD(P)H-dependent oxidoreductase | - |
| DEF76_RS02855 () | 584592..585599 | + | 1008 | WP_205216087.1 | Type IV secretion system protein VirB11 | VF |
| DEF76_RS02860 () | 585599..585910 | + | 312 | WP_114911032.1 | TrbC/VirB2 family protein | - |
| DEF76_RS02865 () | 585910..586179 | + | 270 | WP_114911033.1 | VirB3 family type IV secretion system protein | - |
| DEF76_RS02870 () | 586188..588614 | + | 2427 | WP_114911034.1 | conjugal transfer protein TrbE | - |
| DEF76_RS02875 () | 588611..589333 | + | 723 | WP_114911035.1 | P-type conjugative transfer protein TrbJ | - |
| DEF76_RS02880 () | 589413..590672 | + | 1260 | WP_114911036.1 | P-type conjugative transfer protein TrbL | - |
| DEF76_RS02885 () | 590675..591355 | + | 681 | WP_114911037.1 | conjugal transfer protein TrbF | - |
| DEF76_RS02890 () | 591355..592419 | + | 1065 | WP_114911038.1 | P-type conjugative transfer protein TrbG | - |
| DEF76_RS02895 () | 592470..593564 | + | 1095 | WP_205216165.1 | Type IV secretion system protein virB10 | VF |
| DEF76_RS02900 () | 593575..593850 | + | 276 | WP_114911040.1 | DUF2274 domain-containing protein | - |
| DEF76_RS02905 () | 593747..594706 | - | 960 | WP_114911041.1 | HTH-type transcriptional regulator GltC | VF |
| DEF76_RS02910 () | 594934..595374 | - | 441 | WP_162800452.1 | cytochrome C | - |
| DEF76_RS02915 () | 595791..596027 | - | 237 | WP_205216166.1 | LysR family transcriptional regulator | - |
| DEF76_RS02920 () | 596078..596524 | - | 447 | Protein_567 | IS256 family transposase IS1354 | Transposase |
| DEF76_RS02925 () | 596622..596960 | - | 339 | WP_114911044.1 | IS91 family transposase ISWz1 | Transposase |
| DEF76_RS02930 () | 597068..597916 | - | 849 | Protein_569 | IS110 family transposase ISMmg1 | Transposase |
| DEF76_RS02935 () | 598233..598832 | - | 600 | WP_114911045.1 | class I SAM-dependent methyltransferase | - |
| DEF76_RS02940 () | 599082..599885 | - | 804 | WP_114911046.1 | nucleoside phosphorylase | - |
| DEF76_RS02945 () | 599892..600317 | - | 426 | WP_162800453.1 | MerC family mercury resistance protein | - |
| DEF76_RS02950 () | 600436..600774 | - | 339 | WP_114913621.1 | SHOCT domain-containing protein | - |
| DEF76_RS02955 () | 600890..601231 | - | 342 | WP_205216088.1 | high-potential iron-sulfur protein | - |
| DEF76_RS02960 () | 601438..602109 | - | 672 | WP_205216089.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| DEF76_RS02965 () | 602218..602988 | + | 771 | WP_114911048.1 | MBL fold metallo-hydrolase | - |
| DEF76_RS02970 () | 602985..603236 | + | 252 | WP_114911049.1 | hypothetical protein | - |
| DEF76_RS02975 () | 603233..604558 | + | 1326 | WP_114911050.1 | MFS transporter | - |
| DEF76_RS02980 () | 604829..605575 | + | 747 | WP_114911051.1 | damage-inducible protein | - |
| DEF76_RS02985 () | 605490..607013 | + | 1524 | WP_114911052.1 | DNA polymerase Y family protein | - |
| DEF76_RS02990 () | 607010..610177 | + | 3168 | WP_114911053.1 | error-prone DNA polymerase | - |
| DEF76_RS02995 () | 610193..610573 | - | 381 | WP_162800454.1 | sulfite--cytochrome C oxidoreductase subunit B | - |
| DEF76_RS03000 () | 610586..611797 | - | 1212 | WP_114913624.1 | molybdopterin-dependent oxidoreductase | - |
| DEF76_RS03005 () | 611890..612096 | - | 207 | WP_162800455.1 | hypothetical protein | - |
| DEF76_RS03010 () | 612402..612875 | + | 474 | WP_162800456.1 | hypothetical protein | - |
| DEF76_RS03015 () | 612875..613993 | + | 1119 | WP_114911057.1 | putative sulfate exporter family transporter | - |
| DEF76_RS03020 () | 614081..614941 | - | 861 | WP_114911058.1 | pantoate--beta-alanine ligase | - |
| DEF76_RS03025 () | 615549..616895 | + | 1347 | WP_114913625.1 | IS91 family transposase ISCARN110 | Transposase |
| DEF76_RS03030 () | 616950..617342 | + | 393 | WP_114911059.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DEF76_RS03035 () | 617317..617643 | + | 327 | WP_114911060.1 | DNA-binding transcriptional regulator | - |
| DEF76_RS19205 () | 617666..619474 | + | 1809 | WP_162800457.1 | hypothetical protein | - |
| DEF76_RS03050 () | 619577..620227 | - | 651 | Protein_592 | IS3 family transposase ISPfe1 | Transposase |
| DEF76_RS03055 () | 620406..621947 | + | 1542 | WP_114911000.1 | IS21 family transposase ISPsy14 | Transposase |
| DEF76_RS03060 () | 621969..622721 | + | 753 | WP_114910999.1 | IS21 family transposase ISRel16 | Transposase |
| DEF76_RS03065 () | 622871..623379 | - | 509 | Protein_595 | IS3 family transposase ISPfe1 | Transposase |
| DEF76_RS03070 () | 623443..624249 | - | 807 | WP_162800458.1 | hypothetical protein | - |
| DEF76_RS03075 () | 624430..625617 | + | 1188 | WP_205216090.1 | IS110 family transposase ISGdi7 | Transposase |
| DEF76_RS03080 () | 626034..626477 | + | 444 | WP_114911064.1 | IS66 family transposase ISNisp6 | Transposase |
| DEF76_RS03085 () | 626474..626830 | + | 357 | WP_114911065.1 | IS66 family transposase ISBj7_B | Transposase |
| DEF76_RS03090 () | 626840..628450 | + | 1611 | WP_114911066.1 | IS66 family transposase ISBj7_B | Transposase |
| DEF76_RS03095 () | 628460..629461 | - | 1002 | WP_114911067.1 | Tyrosine recombinase XerC | VF |
| DEF76_RS03100 () | 629458..630384 | - | 927 | WP_114911068.1 | Tyrosine recombinase XerD | VF |
| DEF76_RS03105 () | 630381..631622 | - | 1242 | WP_114913627.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| DEF76_RS03110 () | 631746..631880 | + | 135 | Protein_604 | transposase domain-containing protein | - |
| DEF76_RS19210 () | 632022..632171 | + | 150 | WP_162800398.1 | hypothetical protein | - |
| DEF76_RS03120 () | 633664..634440 | + | 777 | Protein_607 | IS3 family transposase ISCc3 | Transposase |
| DEF76_RS03125 () | 634541..634717 | + | 177 | WP_205216091.1 | metal-sensing transcriptional repressor | - |
| DEF76_RS03130 () | 634735..636267 | + | 1533 | WP_114911071.1 | multicopper oxidase family protein | - |
| DEF76_RS03135 () | 636419..637051 | - | 633 | WP_114913628.1 | class I SAM-dependent methyltransferase | - |
| DEF76_RS03140 () | 637247..637861 | + | 615 | WP_205216167.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| DEF76_RS03150 () | 638698..639909 | - | 1212 | WP_114911072.1 | Prophage integrase IntS ; Integrase | Integrase |
| DEF76_RS03160 () | 640283..642412 | - | 2130 | WP_114911073.1 | amylo-alpha-1,6-glucosidase | - |
| DEF76_RS03165 () | 642910..644826 | + | 1917 | WP_114911074.1 | excinuclease ABC subunit UvrC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|