MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 51167 bp
Accession: NZ_CP029176 Location: 2716843..2768009 Organism: Acidibrevibacterium fodinaquatile strain G45-3 Replicon: chromosome
Accession: NZ_CP029176 Location: 2716843..2768009 Organism: Acidibrevibacterium fodinaquatile strain G45-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DEF76_RS12925 () | 2712145..2712735 | + | 591 | WP_205215999.1 | recombinase family protein | - |
| DEF76_RS12930 () | 2712718..2713302 | - | 585 | WP_162800638.1 | hypothetical protein | - |
| DEF76_RS12935 () | 2713286..2714077 | - | 792 | WP_114912697.1 | AAA family ATPase | - |
| DEF76_RS12940 () | 2714028..2715124 | + | 1097 | Protein_2550 | IS3 family transposase | - |
| DEF76_RS12945 () | 2715340..2716062 | - | 723 | WP_114912698.1 | AAA family ATPase | - |
| DEF76_RS12950 () | 2716059..2717096 | - | 1038 | WP_162800639.1 | WYL domain-containing protein | - |
| DEF76_RS12955 () | 2717132..2719231 | - | 2100 | WP_114912700.1 | ATP-binding protein | - |
| DEF76_RS12960 () | 2719337..2719660 | - | 324 | WP_114912701.1 | hypothetical protein | - |
| DEF76_RS12965 () | 2719925..2721424 | + | 1500 | WP_114912702.1 | DUF2779 domain-containing protein | - |
| DEF76_RS12970 () | 2721458..2721988 | - | 531 | WP_114913876.1 | GNAT family N-acetyltransferase | - |
| DEF76_RS12975 () | 2721988..2722284 | - | 297 | WP_114912703.1 | DUF1778 domain-containing protein | - |
| DEF76_RS12980 () | 2722460..2723239 | - | 780 | WP_114913877.1 | IS21 family transposase ISRsp3 | Transposase |
| DEF76_RS12985 () | 2723229..2724510 | - | 1282 | Protein_2559 | IS21 family transposase | - |
| DEF76_RS12995 () | 2726036..2727067 | + | 1032 | WP_205216000.1 | ABC transporter permease | - |
| DEF76_RS13000 () | 2727108..2728136 | + | 1029 | WP_114912705.1 | sugar ABC transporter substrate-binding protein | - |
| DEF76_RS13005 () | 2728304..2730421 | + | 2118 | WP_114912706.1 | SMP-30/gluconolactonase/LRE family protein | - |
| DEF76_RS13010 () | 2730418..2731509 | + | 1092 | WP_114912707.1 | hypothetical protein | - |
| DEF76_RS13015 () | 2731506..2733002 | + | 1497 | WP_114912708.1 | Xylose import ATP-binding protein XylG | VF |
| DEF76_RS13020 () | 2733258..2733446 | + | 189 | Protein_2566 | IS3 family transposase ISPfe1 | Transposase |
| DEF76_RS13025 () | 2733780..2734933 | + | 1154 | WP_114912709.1 | IS3 family transposase ISPfe1 | Transposase |
| DEF76_RS13035 () | 2736287..2737126 | + | 840 | WP_114912711.1 | IS5 family transposase ISRl2 | Transposase |
| DEF76_RS13040 () | 2737304..2740513 | - | 3210 | WP_114912712.1 | Ti-type conjugative transfer relaxase TraA | - |
| DEF76_RS19395 () | 2740695..2740982 | - | 288 | WP_162800640.1 | hypothetical protein | - |
| DEF76_RS19400 () | 2741308..2741547 | + | 240 | WP_162800535.1 | hypothetical protein | - |
| DEF76_RS13050 () | 2741773..2742048 | + | 276 | WP_114911783.1 | hypothetical protein | - |
| DEF76_RS13055 () | 2742149..2743933 | + | 1785 | WP_114912713.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| DEF76_RS13060 () | 2743985..2744407 | - | 423 | WP_114912714.1 | type II toxin-antitoxin system VapC family toxin | - |
| DEF76_RS13065 () | 2744407..2744652 | - | 246 | WP_114912715.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| DEF76_RS19405 () | 2744882..2745028 | + | 147 | WP_162800641.1 | hypothetical protein | - |
| DEF76_RS13070 () | 2745062..2745304 | + | 243 | WP_114912716.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DEF76_RS13075 () | 2745309..2745758 | + | 450 | WP_114912717.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| DEF76_RS13080 () | 2745999..2746601 | + | 603 | WP_162800642.1 | TIGR02584 family CRISPR-associated protein | - |
| DEF76_RS13085 () | 2746636..2747519 | + | 884 | Protein_2581 | IS3 family transposase ISPfe1 | Transposase |
| DEF76_RS13090 () | 2747697..2749238 | + | 1542 | WP_114911000.1 | IS21 family transposase ISPsy14 | Transposase |
| DEF76_RS13095 () | 2749260..2749946 | + | 687 | WP_114912719.1 | IS21 family transposase ISRel16 | Transposase |
| DEF76_RS13100 () | 2749983..2750986 | - | 1004 | Protein_2584 | IS3 family transposase ISAli4 | Transposase |
| DEF76_RS13105 () | 2751201..2752297 | - | 1097 | Protein_2585 | IS3 family transposase ISMch1 | Transposase |
| DEF76_RS13110 () | 2752340..2752591 | + | 252 | WP_114912720.1 | hypothetical protein | - |
| DEF76_RS13115 () | 2752591..2753709 | + | 1119 | WP_114912721.1 | putative sulfate exporter family transporter | - |
| DEF76_RS13120 () | 2753782..2754459 | - | 678 | Protein_2588 | pantoate--beta-alanine ligase | - |
| DEF76_RS13125 () | 2754661..2755389 | - | 729 | WP_114910980.1 | IS21 family transposase ISMsi1 | Transposase |
| DEF76_RS13130 () | 2755389..2755634 | - | 246 | WP_162800643.1 | IS21 family transposase ISMsi1 | Transposase |
| DEF76_RS13135 () | 2755717..2756292 | + | 576 | WP_162800644.1 | helix-turn-helix domain-containing protein | - |
| DEF76_RS13140 () | 2756274..2756624 | - | 351 | WP_114912724.1 | hypothetical protein | - |
| DEF76_RS19410 () | 2756950..2757189 | + | 240 | WP_162800645.1 | hypothetical protein | - |
| DEF76_RS13150 () | 2757222..2757461 | + | 240 | WP_114912726.1 | hypothetical protein | - |
| DEF76_RS19415 () | 2757574..2757906 | - | 333 | WP_162800646.1 | hypothetical protein | - |
| DEF76_RS13155 () | 2758415..2759794 | - | 1380 | WP_162800647.1 | hypothetical protein | - |
| DEF76_RS19420 () | 2761465..2761752 | - | 288 | WP_162800404.1 | hypothetical protein | - |
| DEF76_RS13165 () | 2762101..2762961 | - | 861 | WP_114912728.1 | hypothetical protein | - |
| DEF76_RS19425 () | 2763183..2763395 | + | 213 | WP_162800648.1 | hypothetical protein | - |
| DEF76_RS13170 () | 2763471..2765177 | + | 1707 | WP_114912729.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| DEF76_RS13175 () | 2765328..2765573 | + | 246 | WP_114912730.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| DEF76_RS13180 () | 2765566..2765856 | + | 291 | WP_114912731.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DEF76_RS19430 () | 2766064..2766801 | - | 738 | WP_162800649.1 | hypothetical protein | - |
| DEF76_RS13185 () | 2767075..2767827 | - | 753 | WP_114912732.1 | IS21 family transposase ISRel16 | Transposase |
| DEF76_RS13190 () | 2767849..2769390 | - | 1542 | WP_114911000.1 | IS21 family transposase | - |
| DEF76_RS13195 () | 2769711..2770166 | - | 456 | WP_114912733.1 | PIN domain-containing protein | - |
| DEF76_RS13200 () | 2770163..2770408 | - | 246 | WP_114912734.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| DEF76_RS13205 () | 2770693..2772873 | - | 2181 | WP_162800650.1 | class I SAM-dependent methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|