MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 117214 bp
Accession: NZ_CP029172 Location: 27135..144348 Organism: Staphylococcus aureus strain PTDrAP2 Replicon: chromosome
Accession: NZ_CP029172 Location: 27135..144348 Organism: Staphylococcus aureus strain PTDrAP2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DD562_RS00195 () | 24532..25233 | + | 702 | WP_000101976.1 | response regulator transcription factor | - |
| DD562_RS00200 () | 25246..27072 | + | 1827 | WP_000871607.1 | cell wall metabolism sensor histidine kinase WalK | - |
| DD562_RS00205 () | 27065..28399 | + | 1335 | WP_001060144.1 | hypothetical protein | - |
| DD562_RS00210 () | 28400..29188 | + | 789 | WP_001104170.1 | two-component system regulatory protein YycI | - |
| DD562_RS00215 () | 29576..30376 | + | 801 | WP_109028161.1 | MBL fold metallo-hydrolase | - |
| DD562_RS00220 () | 30603..32924 | + | 2322 | WP_000645765.1 | LPXTG-anchored adenosine synthase AdsA | - |
| DD562_RS00225 () | 33290..33769 | + | 480 | WP_000704775.1 | 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH | - |
| DD562_RS00230 () | 34015..34320 | + | 306 | WP_000677988.1 | hypothetical protein | - |
| DD562_RS00235 () | 34519..35382 | + | 864 | WP_000680580.1 | hypothetical protein | - |
| DD562_RS00240 () | 35490..36965 | + | 1476 | WP_001138664.1 | hypothetical protein | - |
| DD562_RS00245 () | 37191..38291 | + | 1101 | WP_000449985.1 | hypothetical protein | - |
| DD562_RS00250 () | 38284..38655 | + | 372 | WP_001058156.1 | hypothetical protein | - |
| DD562_RS00255 () | 38652..40295 | + | 1644 | WP_001015578.1 | primase | - |
| DD562_RS00260 () | 40521..42197 | + | 1677 | WP_000676596.1 | recombinase family protein | - |
| DD562_RS00265 () | 42303..42641 | + | 339 | WP_000171559.1 | hypothetical protein | - |
| DD562_RS00270 () | 42737..43048 | + | 312 | WP_001083109.1 | hypothetical protein | - |
| DD562_RS00275 () | 43064..43570 | + | 507 | WP_000447786.1 | DUF1643 domain-containing protein | - |
| DD562_RS00280 () | 43719..44393 | - | 675 | WP_001106056.1 | IS6-like element IS257 family transposase | - |
| DD562_RS00285 () | 44447..44818 | + | 372 | Protein_35 | hydroxymethylglutaryl-CoA synthase family protein | - |
| DD562_RS00295 () | 45735..46478 | + | 744 | WP_000958858.1 | glycerophosphoryl diester phosphodiesterase | - |
| DD562_RS00300 () | 46575..47003 | + | 429 | WP_000872606.1 | MaoC family dehydratase | - |
| DD562_RS00305 () | 47049..49058 | - | 2010 | WP_063852638.1 | PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA | - |
| DD562_RS00310 () | 49155..49262 | + | 108 | Protein_39 | beta-lactam sensor/signal transducer MecR1 | - |
| DD562_RS00315 () | 49303..49977 | + | 675 | Protein_40 | IS6 family transposase | - |
| DD562_RS00320 () | 50037..50465 | - | 429 | WP_000671996.1 | VOC family protein | - |
| DD562_RS00325 () | 50546..51475 | + | 930 | WP_000750311.1 | HTH domain-containing protein | - |
| DD562_RS00330 () | 51637..53625 | + | 1989 | WP_001038847.1 | hypothetical protein | - |
| DD562_RS00335 () | 53820..54929 | + | 1110 | WP_000283873.1 | hypothetical protein | - |
| DD562_RS00340 () | 54922..55290 | + | 369 | WP_001058155.1 | hypothetical protein | - |
| DD562_RS00345 () | 55290..56906 | + | 1617 | WP_001015575.1 | primase | - |
| DD562_RS00350 () | 57131..58810 | + | 1680 | WP_000676595.1 | recombinase family protein | - |
| DD562_RS00355 () | 58899..59237 | + | 339 | WP_000175890.1 | hypothetical protein | - |
| DD562_RS00365 () | 59331..59642 | + | 312 | WP_001024802.1 | DUF960 domain-containing protein | - |
| DD562_RS00370 () | 59657..60127 | + | 471 | WP_001092192.1 | DUF1643 domain-containing protein | - |
| DD562_RS00375 () | 60168..60842 | - | 675 | WP_001105999.1 | IS6-like element IS257 family transposase | - |
| DD562_RS00380 () | 61039..62418 | + | 1380 | WP_000492283.1 | tetracycline efflux MFS transporter Tet(K) | - |
| DD562_RS00385 () | 62604..63845 | + | 1242 | WP_000122374.1 | plasmid recombination protein | - |
| DD562_RS00390 () | 64372..65326 | + | 955 | Protein_54 | replication initiation factor domain-containing protein | - |
| DD562_RS00395 () | 65414..66088 | - | 675 | WP_001105999.1 | IS6-like element IS257 family transposase | - |
| DD562_RS00400 () | 66120..66761 | + | 642 | WP_078098711.1 | hypothetical protein | - |
| DD562_RS00405 () | 66740..67105 | + | 366 | Protein_57 | HNH endonuclease | - |
| DD562_RS00410 () | 67038..67652 | - | 615 | WP_000651113.1 | hypothetical protein | - |
| DD562_RS00415 () | 67739..68014 | + | 276 | WP_000565831.1 | hypothetical protein | - |
| DD562_RS00420 () | 68126..68485 | - | 360 | WP_001631039.1 | hypothetical protein | - |
| DD562_RS00425 () | 68692..69018 | + | 327 | WP_000391495.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| DD562_RS00435 () | 69348..71273 | + | 1926 | WP_191961680.1 | heavy metal translocating P-type ATPase | - |
| DD562_RS00440 () | 72345..73028 | + | 684 | WP_037537722.1 | hypothetical protein | - |
| DD562_RS00445 () | 73422..74081 | - | 660 | WP_191961679.1 | hypothetical protein | - |
| DD562_RS00450 () | 74217..75581 | + | 1365 | WP_037537719.1 | YqeG family HAD IIIA-type phosphatase | - |
| DD562_RS00455 () | 76302..76598 | + | 297 | WP_002360685.1 | hypothetical protein | - |
| DD562_RS00460 () | 76599..77015 | + | 417 | WP_000323438.1 | recombinase | - |
| DD562_RS00465 () | 77035..78579 | + | 1545 | WP_002390960.1 | recombinase family protein | - |
| DD562_RS00470 () | 78722..78946 | + | 225 | WP_000205227.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| DD562_RS00475 () | 78961..79830 | + | 870 | WP_109028163.1 | nucleotidyltransferase domain-containing protein | Toxin Detail |
| DD562_RS00480 () | 79811..80545 | + | 735 | WP_000662263.1 | class I SAM-dependent methyltransferase | - |
| DD562_RS00485 () | 80578..81441 | + | 864 | WP_002294505.1 | aminoglycoside nucleotidyltransferase ANT(6)-Ia | - |
| DD562_RS00490 () | 81485..82012 | + | 528 | WP_002294507.1 | adenine phosphoribosyltransferase | - |
| DD562_RS00495 () | 82144..82953 | + | 810 | WP_002294509.1 | ANT(9) family aminoglycoside nucleotidyltransferase Spw | - |
| DD562_RS00500 () | 83171..83422 | + | 252 | WP_002294510.1 | hypothetical protein | - |
| DD562_RS00505 () | 83473..83931 | - | 459 | WP_002325145.1 | hypothetical protein | - |
| DD562_RS00510 () | 84017..84577 | + | 561 | Protein_77 | zinc ribbon domain-containing protein | - |
| DD562_RS00515 () | 85020..86504 | + | 1485 | WP_002294513.1 | ABC-F type ribosomal protection protein Lsa(E) | - |
| DD562_RS00520 () | 86558..87361 | + | 804 | WP_002294514.1 | lincosamide nucleotidyltransferase Lnu(B) | - |
| DD562_RS00525 () | 87969..89361 | + | 1393 | Protein_80 | glycosyltransferase | - |
| DD562_RS00530 () | 89745..90860 | + | 1116 | WP_080290982.1 | IS110 family transposase | - |
| DD562_RS00535 () | 91128..92456 | - | 1329 | WP_109028164.1 | persulfide dioxygenase-sulfurtransferase CstB | - |
| DD562_RS00540 () | 92475..93542 | - | 1068 | WP_109028165.1 | DsrE/DsrF/DrsH-like family protein | - |
| DD562_RS00545 () | 93681..93941 | + | 261 | WP_109028166.1 | persulfide-sensing transcriptional repressor CstR | - |
| DD562_RS00550 () | 93938..94696 | + | 759 | WP_109028167.1 | sulfite exporter TauE/SafE family protein | - |
| DD562_RS00555 () | 95378..95575 | + | 198 | Protein_86 | hypothetical protein | - |
| DD562_RS00560 () | 95616..95795 | + | 180 | Protein_87 | copper-transporting ATPase | - |
| DD562_RS00565 () | 95801..97234 | + | 1434 | WP_020362832.1 | multicopper oxidase domain-containing protein | - |
| DD562_RS00570 () | 97254..97736 | + | 483 | WP_109028169.1 | YdhK family protein | - |
| DD562_RS00575 () | 98003..98659 | + | 657 | WP_050958479.1 | hypothetical protein | - |
| DD562_RS00580 () | 98835..99566 | + | 732 | WP_109028170.1 | hypothetical protein | - |
| DD562_RS00585 () | 99646..100971 | + | 1326 | WP_109028171.1 | hypothetical protein | - |
| DD562_RS00590 () | 101182..102282 | + | 1101 | WP_109028172.1 | hypothetical protein | - |
| DD562_RS00595 () | 102275..102643 | + | 369 | WP_053464820.1 | hypothetical protein | - |
| DD562_RS00600 () | 102643..104286 | + | 1644 | WP_109028173.1 | DNA primase | - |
| DD562_RS00605 () | 104512..106188 | + | 1677 | WP_109028174.1 | recombinase family protein | - |
| DD562_RS00610 () | 106294..106632 | + | 339 | WP_031796662.1 | hypothetical protein | - |
| DD562_RS00615 () | 106728..107039 | + | 312 | WP_031796663.1 | hypothetical protein | - |
| DD562_RS00620 () | 107057..107563 | + | 507 | WP_031796664.1 | DUF1643 domain-containing protein | - |
| DD562_RS00625 () | 107584..107905 | + | 322 | Protein_100 | RadC family protein | - |
| DD562_RS00630 () | 108021..109106 | + | 1086 | WP_000867968.1 | tyrosine-type recombinase/integrase | - |
| DD562_RS00635 () | 109103..111001 | + | 1899 | WP_000178563.1 | tyrosine-type recombinase/integrase | - |
| DD562_RS00640 () | 111002..111385 | + | 384 | WP_000517973.1 | hypothetical protein | - |
| DD562_RS00645 () | 111702..113276 | + | 1575 | WP_000698182.1 | Vga family ABC-F type ribosomal protection protein | - |
| DD562_RS00650 () | 113349..113498 | + | 150 | Protein_105 | DNA repair protein RadC | - |
| DD562_RS00655 () | 113668..114540 | + | 873 | WP_031796672.1 | HTH domain-containing protein | - |
| DD562_RS00660 () | 114597..114887 | + | 291 | WP_109028175.1 | hypothetical protein | - |
| DD562_RS00665 () | 114903..115397 | + | 495 | WP_109028176.1 | hypothetical protein | - |
| DD562_RS00670 () | 115536..116111 | + | 576 | WP_031796675.1 | hypothetical protein | - |
| DD562_RS14940 () | 116416..116616 | + | 201 | WP_049948357.1 | hypothetical protein | - |
| DD562_RS00680 () | 116679..117160 | + | 482 | Protein_111 | DUF1643 domain-containing protein | - |
| DD562_RS00685 () | 117176..117397 | + | 222 | WP_031796677.1 | hypothetical protein | - |
| DD562_RS00690 () | 117467..120589 | - | 3123 | WP_109028177.1 | type I restriction endonuclease subunit R | - |
| DD562_RS00695 () | 120573..121853 | - | 1281 | WP_109028178.1 | restriction endonuclease subunit S | - |
| DD562_RS00700 () | 121843..123357 | - | 1515 | WP_109028179.1 | type I restriction-modification system subunit M | - |
| DD562_RS00715 () | 125857..128061 | + | 2205 | WP_000592003.1 | AAA family ATPase | - |
| DD562_RS00720 () | 128292..128516 | + | 225 | WP_014532447.1 | hypothetical protein | - |
| DD562_RS00725 () | 128528..129526 | + | 999 | WP_014653185.1 | IS21 family transposase | - |
| DD562_RS00730 () | 129538..130305 | + | 768 | Protein_119 | IS21-like element helper ATPase IstB | - |
| DD562_RS00735 () | 130583..131206 | + | 624 | WP_000067245.1 | hypothetical protein | - |
| DD562_RS00740 () | 131389..132279 | + | 891 | Protein_121 | IS3 family transposase | - |
| DD562_RS00755 () | 132990..134162 | + | 1173 | WP_000195429.1 | IS256-like element IS256 family transposase | - |
| DD562_RS00765 () | 134534..134920 | - | 387 | Protein_123 | transposase | - |
| DD562_RS00770 () | 134996..135967 | - | 972 | WP_000140912.1 | amidohydrolase | - |
| DD562_RS00775 () | 136020..136391 | - | 372 | WP_031869188.1 | DoxX family protein | - |
| DD562_RS00780 () | 136411..137802 | - | 1392 | WP_109028181.1 | DHA2 family efflux MFS transporter permease subunit | - |
| DD562_RS00785 () | 137916..138119 | + | 204 | WP_000786139.1 | N-acetyltransferase | - |
| DD562_RS00790 () | 138129..138494 | + | 366 | WP_001016372.1 | arylamine N-acetyltransferase | - |
| DD562_RS00800 () | 138769..139344 | + | 576 | WP_000414483.1 | TetR/AcrR family transcriptional regulator | - |
| DD562_RS00810 () | 139815..140288 | + | 474 | WP_000455982.1 | GNAT family N-acetyltransferase | - |
| DD562_RS00815 () | 140396..141382 | - | 987 | WP_000662029.1 | tRNA-dihydrouridine synthase | - |
| DD562_RS00820 () | 141691..141894 | + | 204 | WP_000389761.1 | hypothetical protein | - |
| DD562_RS00825 () | 141943..142239 | + | 297 | WP_000179902.1 | TfoX/Sxy family protein | - |
| DD562_RS00830 () | 142302..143522 | - | 1221 | WP_000130759.1 | MFS transporter | - |
| DD562_RS00835 () | 143515..144066 | - | 552 | WP_000627030.1 | flavodoxin family protein | - |
| DD562_RS00840 () | 144179..145039 | + | 861 | WP_001052502.1 | LysR family transcriptional regulator | - |
| DD562_RS00845 () | 145663..146265 | + | 603 | WP_000908949.1 | hypothetical protein | - |
| DD562_RS00850 () | 146557..147471 | - | 915 | WP_000814440.1 | alpha/beta hydrolase | - |
| DD562_RS00855 () | 147650..148204 | + | 555 | WP_001100493.1 | TetR/AcrR family transcriptional regulator C-terminal domain-containing protein | - |
| DD562_RS00860 () | 148435..149166 | + | 732 | WP_001181359.1 | methyltransferase domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|