MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 104734 bp
Accession: NZ_CP029166 Location: 386520..491253 Organism: Staphylococcus aureus strain SVH7513 Replicon: chromosome
Accession: NZ_CP029166 Location: 386520..491253 Organism: Staphylococcus aureus strain SVH7513 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DD555_RS01815 () | 381548..381880 | + | 333 | WP_000731878.1 | glycine cleavage system protein H | - |
| DD555_RS01820 () | 381881..382681 | + | 801 | WP_000449061.1 | protein-ADP-ribose hydrolase | - |
| DD555_RS01825 () | 382671..383615 | + | 945 | WP_001191946.1 | NAD-dependent deacetylase | - |
| DD555_RS01830 () | 383593..384615 | + | 1023 | WP_000280803.1 | lipoate--protein ligase | - |
| DD555_RS01835 () | 384930..385955 | + | 1026 | WP_001060912.1 | aldehyde reductase | - |
| DD555_RS01840 () | 386048..387394 | - | 1347 | WP_001147970.1 | PTS ascorbate transporter subunit IIC | - |
| DD555_RS01845 () | 387409..387693 | - | 285 | WP_000699538.1 | PTS sugar transporter subunit IIB | - |
| DD555_RS01850 () | 387695..388138 | - | 444 | WP_000050762.1 | PTS sugar transporter subunit IIA | - |
| DD555_RS01855 () | 388143..390098 | - | 1956 | WP_000954261.1 | BglG family transcription antiterminator | - |
| DD555_RS01865 () | 390310..390729 | + | 420 | WP_000397416.1 | multidrug efflux transporter transcriptional repressor MepR | - |
| DD555_RS01870 () | 390836..392191 | + | 1356 | WP_000651060.1 | multidrug efflux MATE transporter MepA | - |
| DD555_RS01875 () | 392296..392736 | + | 441 | WP_000335332.1 | MepB family protein | - |
| DD555_RS01880 () | 392819..394177 | - | 1359 | WP_001010111.1 | Glycerol-3-phosphate transporter | VF |
| DD555_RS01885 () | 394485..395411 | + | 927 | WP_001028221.1 | VOC family protein | - |
| DD555_RS01890 () | 395425..396486 | + | 1062 | WP_001096116.1 | LLM class flavin-dependent oxidoreductase | - |
| DD555_RS01895 () | 396500..397066 | + | 567 | WP_001028431.1 | NAD(P)H-dependent oxidoreductase | - |
| DD555_RS01900 () | 397126..398121 | - | 996 | WP_000157641.1 | YeiH family protein | - |
| DD555_RS01910 () | 398540..399085 | + | 546 | WP_000467652.1 | GNAT family N-acetyltransferase | - |
| DD555_RS01915 () | 399353..400207 | + | 855 | WP_000737196.1 | EfeM/EfeO family lipoprotein | - |
| DD555_RS01920 () | 400204..401433 | + | 1230 | WP_084927563.1 | deferrochelatase/peroxidase EfeB | - |
| DD555_RS01925 () | 401414..403126 | + | 1713 | WP_179133231.1 | FTR1 family protein | - |
| DD555_RS01930 () | 403218..403919 | - | 702 | WP_001795631.1 | twin-arginine translocase subunit TatC | - |
| DD555_RS01935 () | 403936..404160 | - | 225 | WP_001794540.1 | twin-arginine translocase TatA/TatE family subunit | - |
| DD555_RS01940 () | 404260..404649 | - | 390 | WP_000886005.1 | DUF1398 family protein | - |
| DD555_RS01945 () | 404890..405093 | + | 204 | WP_001246013.1 | hypothetical protein | VF |
| DD555_RS01950 () | 405090..405803 | + | 714 | WP_000698752.1 | DUF3169 family protein | - |
| DD555_RS01955 () | 405828..406670 | + | 843 | WP_000209565.1 | ABC transporter ATP-binding protein | - |
| DD555_RS01960 () | 406670..407299 | + | 630 | WP_000677714.1 | ABC-2 transporter permease | - |
| DD555_RS01965 () | 407666..408799 | - | 1134 | WP_000245700.1 | low temperature requirement protein A | - |
| DD555_RS01970 () | 409338..410519 | + | 1182 | WP_000199070.1 | acetyl-CoA C-acetyltransferase | - |
| DD555_RS01975 () | 410602..411354 | - | 753 | WP_000195907.1 | cyclase family protein | - |
| DD555_RS01980 () | 411397..413625 | - | 2229 | WP_084986284.1 | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase | - |
| DD555_RS01985 () | 413622..415463 | - | 1842 | WP_000077328.1 | bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase | - |
| DD555_RS01990 () | 415432..416592 | - | 1161 | WP_000175846.1 | PLP-dependent aspartate aminotransferase family protein | - |
| DD555_RS01995 () | 416589..417692 | - | 1104 | WP_000655692.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| DD555_RS02005 () | 418356..419201 | + | 846 | WP_001550052.1 | ParB/RepB/Spo0J family partition protein | - |
| DD555_RS02010 () | 419358..420239 | + | 882 | WP_001077602.1 | mechanosensitive ion channel family protein | - |
| DD555_RS02015 () | 420269..420472 | + | 204 | WP_000157345.1 | DUF951 domain-containing protein | - |
| DD555_RS02020 () | 420484..421581 | + | 1098 | WP_001218732.1 | redox-regulated ATPase YchF | - |
| DD555_RS02025 () | 421667..421858 | - | 192 | WP_001052483.1 | hypothetical protein | - |
| DD555_RS02035 () | 422102..422398 | + | 297 | WP_001261460.1 | 30S ribosomal protein S6 | - |
| DD555_RS02040 () | 422419..422922 | + | 504 | WP_000934799.1 | single-stranded DNA-binding protein | - |
| DD555_RS02045 () | 422974..423216 | + | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| DD555_RS02050 () | 423445..424242 | - | 798 | WP_000119675.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| DD555_RS02055 () | 424266..425483 | - | 1218 | WP_084938017.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| DD555_RS02060 () | 425497..426885 | - | 1389 | WP_001661453.1 | SAP domain-containing protein | - |
| DD555_RS02065 () | 426912..427484 | - | 573 | WP_001661454.1 | helix-turn-helix domain-containing protein | - |
| DD555_RS02070 () | 427656..427877 | + | 222 | WP_000560872.1 | helix-turn-helix domain-containing protein | - |
| DD555_RS02075 () | 427878..428150 | + | 273 | WP_000124597.1 | helix-turn-helix domain-containing protein | - |
| DD555_RS02080 () | 428162..428308 | + | 147 | WP_000784893.1 | hypothetical protein | - |
| DD555_RS02085 () | 428301..428510 | + | 210 | WP_001058494.1 | hypothetical protein | Antitoxin Detail |
| DD555_RS02090 () | 428513..428830 | + | 318 | WP_084938006.1 | DUF1474 family protein | Toxin Detail |
| DD555_RS02095 () | 428894..429763 | + | 870 | WP_070064471.1 | primase alpha helix C-terminal domain-containing protein | - |
| DD555_RS02100 () | 429777..431486 | + | 1710 | WP_070064470.1 | DUF927 domain-containing protein | - |
| DD555_RS02105 () | 431816..432196 | + | 381 | WP_070064469.1 | hypothetical protein | - |
| DD555_RS02110 () | 432193..432834 | + | 642 | WP_001047694.1 | hypothetical protein | - |
| DD555_RS02115 () | 433181..433522 | + | 342 | WP_001190609.1 | hypothetical protein | - |
| DD555_RS02120 () | 433534..434112 | + | 579 | WP_084935142.1 | pathogenicity island protein | - |
| DD555_RS02125 () | 434130..434348 | + | 219 | WP_000448770.1 | capsid morphogenesis B protein | - |
| DD555_RS02130 () | 434399..434926 | + | 528 | WP_000771370.1 | spore coat protein | - |
| DD555_RS02135 () | 434929..435270 | + | 342 | WP_000358778.1 | hypothetical protein | - |
| DD555_RS02140 () | 435267..435836 | + | 570 | WP_001293077.1 | terminase small subunit | - |
| DD555_RS15625 () | 436111..436281 | + | 171 | WP_000022954.1 | hypothetical protein | - |
| DD555_RS02145 () | 436592..436873 | + | 282 | WP_001577971.1 | hypothetical protein | - |
| DD555_RS02150 () | 436991..437503 | + | 513 | WP_000813311.1 | hypothetical protein | - |
| DD555_RS02160 () | 438302..439240 | - | 939 | WP_001822249.1 | Abi family protein | - |
| DD555_RS15665 () | 439279..439986 | - | 708 | Protein_401 | tyrosine-type recombinase/integrase | - |
| DD555_RS02175 () | 440186..440797 | + | 612 | WP_000475326.1 | toxin | - |
| DD555_RS02180 () | 441166..441534 | + | 369 | WP_000849177.1 | YxeA family protein | - |
| DD555_RS02185 () | 441715..442287 | + | 573 | WP_000769721.1 | PepSY domain-containing protein | - |
| DD555_RS02190 () | 442425..442688 | - | 264 | WP_001055897.1 | helix-turn-helix domain-containing protein | - |
| DD555_RS02195 () | 442988..443239 | + | 252 | WP_000466748.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| DD555_RS02200 () | 443278..443487 | - | 210 | WP_000211676.1 | hypothetical protein | - |
| DD555_RS02205 () | 443665..444246 | + | 582 | WP_000158374.1 | phosphoglycerate mutase family protein | - |
| DD555_RS02210 () | 444312..444695 | - | 384 | WP_000868248.1 | hypothetical protein | - |
| DD555_RS02215 () | 444950..445576 | - | 627 | WP_000746687.1 | NDxxF motif lipoprotein | - |
| DD555_RS02220 () | 445649..445891 | - | 243 | Protein_411 | hypothetical protein | - |
| DD555_RS02225 () | 446021..447544 | - | 1524 | WP_084927557.1 | alkyl hydroperoxide reductase subunit F | - |
| DD555_RS02230 () | 447560..448129 | - | 570 | WP_000052781.1 | peroxiredoxin | - |
| DD555_RS02235 () | 448621..449386 | + | 766 | Protein_414 | NADPH-dependent oxidoreductase | - |
| DD555_RS02240 () | 449467..450855 | - | 1389 | WP_000991007.1 | L-cystine transporter | - |
| DD555_RS02245 () | 450940..451041 | + | 102 | WP_001789518.1 | hypothetical protein | - |
| DD555_RS02255 () | 451832..452776 | - | 945 | WP_084927559.1 | hypothetical protein | - |
| DD555_RS02260 () | 452894..453556 | - | 663 | WP_000394698.1 | hypothetical protein | - |
| DD555_RS02265 () | 453699..454106 | - | 408 | WP_000763768.1 | general stress protein | - |
| DD555_RS02270 () | 454619..455197 | + | 579 | WP_000421410.1 | xanthine phosphoribosyltransferase | - |
| DD555_RS02275 () | 455197..456465 | + | 1269 | WP_000793009.1 | purine permease | - |
| DD555_RS02280 () | 456503..457969 | + | 1467 | WP_000264071.1 | IMP dehydrogenase | - |
| DD555_RS02285 () | 457994..459535 | + | 1542 | WP_000424966.1 | glutamine-hydrolyzing GMP synthase | - |
| DD555_RS02290 () | 459603..460796 | - | 1194 | WP_000237797.1 | Putative defective protein IntQ ; Integrase | Integrase |
| DD555_RS02295 () | 460823..461023 | - | 201 | WP_000633907.1 | DUF3173 family protein | - |
| DD555_RS02305 () | 461521..461751 | - | 231 | WP_000845143.1 | helix-turn-helix domain-containing protein | - |
| DD555_RS02310 () | 461748..462170 | - | 423 | WP_000804879.1 | sigma-70 family RNA polymerase sigma factor | - |
| DD555_RS15670 () | 462127..462314 | - | 188 | Protein_428 | hypothetical protein | - |
| DD555_RS02320 () | 462701..463054 | + | 354 | WP_001227350.1 | helix-turn-helix domain-containing protein | - |
| DD555_RS02325 () | 463112..463279 | - | 168 | WP_001803271.1 | cysteine-rich KTR domain-containing protein | - |
| DD555_RS02330 () | 463398..465317 | - | 1920 | WP_000691737.1 | Tetracycline resistance protein TetM from transposon TnFO1 | VF |
| DD555_RS02335 () | 465333..465449 | - | 117 | WP_001791010.1 | tetracycline resistance determinant leader peptide | - |
| DD555_RS02345 () | 465694..466623 | - | 930 | WP_000584386.1 | conjugal transfer protein | - |
| DD555_RS02350 () | 466640..467662 | - | 1023 | WP_000768372.1 | Gamma-DL-glutamyl hydrolase | VF |
| DD555_RS02355 () | 467659..469686 | - | 2028 | WP_000192392.1 | membrane protein | - |
| DD555_RS02360 () | 469683..472136 | - | 2454 | WP_000331165.1 | ATP-binding protein | - |
| DD555_RS02365 () | 472120..472515 | - | 396 | WP_000723887.1 | conjugal transfer protein | - |
| DD555_RS02370 () | 472587..473225 | - | 639 | WP_000248477.1 | hypothetical protein | - |
| DD555_RS02375 () | 473281..473775 | - | 495 | WP_000870467.1 | antirestriction protein ArdA | - |
| DD555_RS02380 () | 473842..474621 | - | 780 | WP_000675717.1 | abortive infection family protein | - |
| DD555_RS02385 () | 474663..474884 | - | 222 | WP_001009054.1 | hypothetical protein | - |
| DD555_RS02390 () | 474881..475171 | - | 291 | WP_084927594.1 | hypothetical protein | - |
| DD555_RS02395 () | 475168..476352 | - | 1185 | WP_084927592.1 | replication initiation factor domain-containing protein | - |
| DD555_RS02400 () | 476534..477937 | - | 1404 | WP_001130244.1 | DUF87 domain-containing protein | - |
| DD555_RS02405 () | 477959..478732 | - | 774 | WP_000185761.1 | hypothetical protein | - |
| DD555_RS02410 () | 478742..479119 | - | 378 | WP_001234191.1 | YdcP family protein | - |
| DD555_RS02415 () | 479140..479454 | - | 315 | WP_000421279.1 | YdcP family protein | - |
| DD555_RS02420 () | 479654..481447 | - | 1794 | Protein_448 | ATP-dependent helicase | - |
| DD555_RS02425 () | 481444..483633 | - | 2190 | WP_000470931.1 | AAA family ATPase | - |
| DD555_RS02430 () | 483767..484957 | - | 1191 | WP_000997693.1 | IS256 family transposase ISLgar5 | Transposase |
| DD555_RS02440 () | 485451..485987 | - | 537 | WP_000551776.1 | hypothetical protein | - |
| DD555_RS02450 () | 486544..487905 | + | 1362 | WP_001549130.1 | ISL3 family transposase IS1181 | Transposase |
| DD555_RS02455 () | 487888..488604 | - | 717 | WP_000041885.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| DD555_RS02460 () | 489003..489275 | - | 273 | WP_000159787.1 | IS3 family transposase IS655 | Transposase |
| DD555_RS02470 () | 489536..489688 | - | 153 | WP_000248839.1 | hypothetical protein | - |
| DD555_RS02475 () | 490212..490571 | - | 360 | WP_001021622.1 | DUF1304 domain-containing protein | - |
| DD555_RS02480 () | 490590..491435 | - | 846 | WP_001024377.1 | SDR family oxidoreductase | - |
| DD555_RS02485 () | 491907..492587 | + | 681 | WP_000669005.1 | superantigen-like protein SSL1 | - |
| DD555_RS02490 () | 492873..493568 | + | 696 | WP_000782618.1 | superantigen-like protein SSL2 | - |
| DD555_RS02495 () | 493859..494929 | + | 1071 | WP_000784028.1 | superantigen-like protein SSL3 | - |
| DD555_RS02500 () | 495293..495997 | + | 705 | WP_000784244.1 | superantigen-like protein SSL5 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|