MGE detailed information
MGE type: Prophage MGE length: 79874 bp
Accession: NZ_CP029166 Location: 1938594..2018467 Organism: Staphylococcus aureus strain SVH7513 Replicon: chromosome
Accession: NZ_CP029166 Location: 1938594..2018467 Organism: Staphylococcus aureus strain SVH7513 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DD555_RS09855 () | 1934255..1935757 | - | 1503 | WP_001261677.1 | FAD/NAD(P)-binding domain-containing protein | - |
| DD555_RS09860 () | 1936280..1936594 | + | 315 | WP_000221179.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| DD555_RS09865 () | 1936594..1937886 | + | 1293 | WP_000989121.1 | arsenite efflux transporter membrane subunit ArsB | - |
| DD555_RS09870 () | 1937904..1938299 | + | 396 | WP_000163235.1 | arsenate reductase (thioredoxin) | - |
| DD555_RS09875 () | 1938594..1939448 | - | 855 | WP_001032833.1 | N-acetylglucosaminidase | - |
| DD555_RS09880 () | 1939724..1939948 | - | 225 | WP_000384171.1 | hypothetical protein | - |
| DD555_RS09885 () | 1940147..1940617 | + | 471 | WP_000671052.1 | RNA polymerase sigma factor SigS | - |
| DD555_RS09890 () | 1940730..1941173 | + | 444 | WP_001153742.1 | competence protein ComK | - |
| DD555_RS09895 () | 1941160..1941603 | - | 444 | WP_001030465.1 | hypothetical protein | - |
| DD555_RS09900 () | 1941899..1942534 | + | 636 | WP_001168904.1 | CPBP family intramembrane metalloprotease SdpA | - |
| DD555_RS09905 () | 1942974..1943687 | - | 714 | WP_001096494.1 | transaldolase | - |
| DD555_RS09910 () | 1943947..1944249 | + | 303 | WP_000091445.1 | hypothetical protein | - |
| DD555_RS09915 () | 1944505..1944870 | + | 366 | WP_001200542.1 | fluoride efflux transporter CrcB | - |
| DD555_RS09920 () | 1944867..1945220 | + | 354 | WP_000623471.1 | CrcB family protein | - |
| DD555_RS09925 () | 1945616..1947240 | + | 1625 | Protein_1857 | IS1182 family transposase ISSau3 | Transposase |
| DD555_RS09930 () | 1947303..1948136 | - | 834 | WP_000453320.1 | aldo/keto reductase | - |
| DD555_RS09935 () | 1948348..1949256 | - | 909 | WP_000366154.1 | NERD domain-containing protein | - |
| DD555_RS09940 () | 1949381..1950574 | - | 1194 | WP_000933822.1 | methionine adenosyltransferase | - |
| DD555_RS09945 () | 1950945..1952537 | + | 1593 | WP_000109906.1 | phosphoenolpyruvate carboxykinase (ATP) | - |
| DD555_RS09950 () | 1952673..1953158 | - | 486 | WP_000093392.1 | IS200-IS605 family transposase ISSep3 | Transposase |
| DD555_RS09955 () | 1953533..1954279 | - | 747 | WP_002868962.1 | S9 family peptidase | - |
| DD555_RS09960 () | 1954284..1954757 | - | 474 | WP_000672014.1 | nucleoside triphosphatase YtkD | - |
| DD555_RS09965 () | 1954823..1955080 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| DD555_RS09970 () | 1955077..1956078 | - | 1002 | WP_000778523.1 | o-succinylbenzoate synthase | - |
| DD555_RS09975 () | 1956083..1957561 | - | 1479 | WP_000348360.1 | o-succinylbenzoate--CoA ligase | - |
| DD555_RS09980 () | 1957720..1958175 | - | 456 | WP_011443643.1 | DUF4909 domain-containing protein | - |
| DD555_RS09985 () | 1958478..1959128 | + | 651 | WP_001795535.1 | excalibur calcium-binding domain-containing protein | - |
| DD555_RS09990 () | 1959209..1960204 | + | 996 | WP_000070653.1 | DUF4352 domain-containing protein | - |
| DD555_RS09995 () | 1960279..1960905 | + | 627 | WP_000669046.1 | hypothetical protein | - |
| DD555_RS10000 () | 1960946..1961290 | + | 345 | WP_000627551.1 | DUF3969 family protein | - |
| DD555_RS10005 () | 1961388..1961939 | + | 552 | WP_000414205.1 | hypothetical protein | - |
| DD555_RS10010 () | 1962157..1962798 | - | 642 | WP_000494956.1 | ImmA/IrrE family metallo-endopeptidase | - |
| DD555_RS10015 () | 1962912..1963097 | - | 186 | WP_000809857.1 | hypothetical protein | - |
| DD555_RS10020 () | 1963099..1963275 | - | 177 | WP_000375476.1 | hypothetical protein | - |
| DD555_RS10025 () | 1963286..1963669 | - | 384 | WP_000070811.1 | hypothetical protein | - |
| DD555_RS10035 () | 1964273..1964416 | - | 144 | WP_001549059.1 | IS3 family transposase IS655 | Transposase |
| DD555_RS10045 () | 1964619..1964714 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| - () | 1964742..1964801 | - | 60 | - | - | Antitoxin Detail |
| DD555_RS10050 () | 1964837..1964938 | + | 102 | WP_001791893.1 | hypothetical protein | - |
| DD555_RS10055 () | 1964916..1965092 | - | 177 | Protein_1881 | transposase | - |
| DD555_RS10060 () | 1965286..1965663 | - | 378 | WP_001037045.1 | DUF1433 domain-containing protein | - |
| DD555_RS10065 () | 1966184..1969932 | - | 3749 | Protein_1883 | ATP-binding protein | - |
| DD555_RS10070 () | 1970035..1971207 | + | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
| DD555_RS10075 () | 1971256..1971627 | - | 372 | WP_084927767.1 | SMEK domain-containing protein | - |
| DD555_RS10080 () | 1972477..1973676 | - | 1200 | WP_000072576.1 | restriction endonuclease subunit S | - |
| DD555_RS10085 () | 1973669..1975225 | - | 1557 | WP_000028659.1 | type I restriction-modification system subunit M | - |
| DD555_RS10090 () | 1975389..1975523 | - | 135 | WP_001791797.1 | hypothetical protein | - |
| DD555_RS10095 () | 1975588..1976307 | - | 720 | WP_001038688.1 | Serine protease SplF | VF |
| DD555_RS10100 () | 1976458..1977174 | - | 717 | WP_001038759.1 | Serine protease SplE | VF |
| DD555_RS10105 () | 1977276..1977383 | + | 108 | WP_011447030.1 | hypothetical protein | - |
| DD555_RS10110 () | 1977332..1978051 | - | 720 | WP_001038704.1 | Serine protease SplD | VF |
| DD555_RS10115 () | 1978172..1978891 | - | 720 | WP_001038867.1 | Serine protease SplC | VF |
| DD555_RS10120 () | 1978949..1979671 | - | 723 | WP_001039447.1 | Serine protease SplB | VF |
| DD555_RS10125 () | 1979796..1980503 | - | 708 | WP_001039435.1 | Serine protease SplA | VF |
| DD555_RS10135 () | 1981468..1982034 | + | 567 | WP_001092763.1 | DUF4888 domain-containing protein | - |
| DD555_RS10140 () | 1982508..1983206 | - | 699 | WP_000586140.1 | hypothetical protein | - |
| DD555_RS10145 () | 1983203..1983964 | - | 762 | WP_000581552.1 | lantibiotic immunity ABC transporter MutE/EpiE family permease subunit | - |
| DD555_RS10150 () | 1983961..1984653 | - | 693 | WP_001096791.1 | putative ABC transporter ATP-binding protein YxlF | VF |
| DD555_RS10155 () | 1984676..1986049 | - | 1374 | WP_000691541.1 | S8 family serine peptidase | - |
| DD555_RS10160 () | 1986059..1986577 | - | 519 | WP_000504439.1 | flavoprotein | - |
| DD555_RS10165 () | 1986593..1987837 | - | 1245 | WP_000566596.1 | lanthionine synthetase C family protein | - |
| DD555_RS10170 () | 1987830..1990823 | - | 2994 | WP_001092605.1 | lantibiotic dehydratase | - |
| DD555_RS10175 () | 1990888..1991031 | - | 144 | WP_000416756.1 | gallidermin/nisin family lantibiotic | - |
| DD555_RS10185 () | 1991768..1991911 | - | 144 | WP_000416759.1 | gallidermin/nisin family lantibiotic | - |
| DD555_RS10190 () | 1992153..1993136 | - | 984 | WP_000782464.1 | Leucotoxin LukDv | VF |
| DD555_RS10195 () | 1993138..1994073 | - | 936 | WP_000473596.1 | Leucotoxin LukEv | VF |
| DD555_RS10200 () | 1994873..1995412 | + | 540 | WP_001790220.1 | hypothetical protein | - |
| DD555_RS10205 () | 1995425..1996213 | + | 789 | WP_000206350.1 | DUF1828 domain-containing protein | - |
| DD555_RS15685 () | 1996674..1996882 | + | 209 | Protein_1910 | hypothetical protein | - |
| DD555_RS10260 () | 1998670..1999224 | - | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
| DD555_RS10270 () | 1999547..2000947 | - | 1401 | WP_000167538.1 | protoporphyrinogen oxidase | - |
| DD555_RS10275 () | 2000971..2001894 | - | 924 | WP_000162881.1 | ferrochelatase | - |
| DD555_RS10280 () | 2001952..2002989 | - | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| DD555_RS10285 () | 2002979..2003089 | - | 111 | WP_001790154.1 | hypothetical protein | - |
| DD555_RS10290 () | 2003252..2003755 | + | 504 | WP_000737976.1 | signal transduction protein TRAP | - |
| DD555_RS10295 () | 2003879..2005102 | - | 1224 | WP_001245769.1 | ABC transporter permease | - |
| DD555_RS10300 () | 2005095..2005835 | - | 741 | WP_000216878.1 | ABC-type transporter ATP-binding protein EcsA | VF |
| DD555_RS10305 () | 2005969..2006391 | + | 423 | WP_000004981.1 | HIT family protein | - |
| DD555_RS10310 () | 2006533..2006898 | + | 366 | WP_000648118.1 | YtxH domain-containing protein | - |
| DD555_RS10320 () | 2007631..2008188 | + | 558 | WP_000477959.1 | DUF3267 domain-containing protein | - |
| DD555_RS10325 () | 2008393..2009355 | + | 963 | WP_000782121.1 | Foldase protein PrsA | VF |
| DD555_RS10330 () | 2009476..2010417 | - | 942 | WP_001244175.1 | 3'-5' exoribonuclease YhaM | - |
| DD555_RS10335 () | 2010414..2013350 | - | 2937 | WP_000584648.1 | AAA family ATPase | - |
| DD555_RS10340 () | 2013340..2014536 | - | 1197 | WP_000238227.1 | exonuclease SbcCD subunit D | - |
| DD555_RS10345 () | 2014827..2014925 | - | 99 | WP_001791795.1 | hypothetical protein | - |
| DD555_RS10355 () | 2015308..2015652 | - | 345 | WP_000290301.1 | YlbF/YmcA family competence regulator | - |
| DD555_RS10360 () | 2015721..2016845 | - | 1125 | WP_000992527.1 | DUF445 domain-containing protein | - |
| DD555_RS10365 () | 2017024..2017488 | - | 465 | WP_000375864.1 | helix-turn-helix transcriptional regulator | - |
| DD555_RS10370 () | 2017844..2018467 | - | 624 | WP_001045133.1 | Transcriptional regulatory protein LiaR | VF |
| DD555_RS10375 () | 2018489..2019601 | - | 1113 | WP_000437967.1 | GAF domain-containing sensor histidine kinase | - |
| DD555_RS10380 () | 2019764..2020585 | + | 822 | WP_000669376.1 | RluA family pseudouridine synthase | - |
| DD555_RS10385 () | 2021048..2022433 | - | 1386 | WP_000116224.1 | class II fumarate hydratase | - |
| DD555_RS10390 () | 2022629..2023024 | - | 396 | WP_000901021.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|