MGE detailed information

MGE type: Conjugative plasmid        MGE length: 190416 bp
Accession: NZ_CP029136        Location: 1..190416         Organism: Klebsiella pneumoniae strain AR376       Replicon: plasmid unnamed2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CSC13_RS00515 () 7..603 + 597 WP_004178053.1 fertility inhibition protein FinO -
CSC13_RS00520 () 623..970 + 348 WP_004152301.1 hypothetical protein -
CSC13_RS00525 () 1185..1730 - 546 WP_004178052.1 hypothetical protein -
CSC13_RS00530 () 2087..4408 + 2322 WP_004178051.1 klebicin B-related nuclease bacteriocin -
CSC13_RS00535 () 4410..4688 + 279 WP_004152296.1 bacteriocin immunity protein -
CSC13_RS00540 () 5029..5508 + 480 WP_009485932.1 Phospholipase D VF
CSC13_RS00545 () 5829..6107 + 279 WP_004199332.1 replication regulatory protein RepA -
CSC13_RS00550 () 6324..6401 + 78 WP_004171457.1 RepA leader peptide Tap -
CSC13_RS00555 () 6394..7251 + 858 WP_004152292.1 incFII family plasmid replication initiator RepA -
CSC13_RS00570 () 8698..10893 - 2196 WP_000093087.1 DEAD/DEAH box helicase -
CSC13_RS00575 () 10890..12206 - 1317 WP_004152291.1 ATP-binding protein -
CSC13_RS00580 () 12210..14519 - 2310 WP_004152290.1 TerB N-terminal domain-containing protein -
CSC13_RS00585 () 15164..16133 - 970 Protein_12 IS5 family transposase IS903B Transposase
CSC13_RS00590 () 16225..17478 - 1254 WP_003846917.1 lactose permease -
CSC13_RS00595 () 17530..20604 - 3075 WP_004152287.1 beta-galactosidase -
CSC13_RS00600 () 20726..21808 - 1083 WP_004152286.1 DNA-binding transcriptional repressor LacI -
CSC13_RS00610 () 22269..23279 + 1011 WP_004152284.1 zinc-binding alcohol dehydrogenase family protein -
CSC13_RS00615 () 23683..24687 + 1005 WP_000427623.1 IS110 family transposase IS4321R Transposase
CSC13_RS00620 () 24985..25227 + 243 WP_071527925.1 EAL domain-containing protein -
CSC13_RS00625 () 25256..25483 - 228 Protein_19 IS66 family transposase -
CSC13_RS00630 () 25558..25851 - 294 WP_004118251.1 IS66 family transposase ISKpn24 Transposase
CSC13_RS00635 () 25950..26717 - 768 WP_004152282.1 Fe(3+) dicitrate transport ATP-binding protein FecE VF
CSC13_RS00640 () 26718..27674 - 957 WP_004152281.1 Fe(3+) dicitrate transport system permease protein FecD VF
CSC13_RS00645 () 27671..28669 - 999 WP_004118243.1 Fe(3+) dicitrate transport system permease protein FecC VF
CSC13_RS00650 () 28666..29568 - 903 WP_004118241.1 Fe(3+) dicitrate ABC transporter substrate-binding protein FecB -
CSC13_RS00655 () 29613..31937 - 2325 WP_004152280.1 Fe(3+) dicitrate transport protein FecA -
CSC13_RS00660 () 32023..32976 - 954 WP_004118237.1 fec operon regulator FecR -
CSC13_RS00665 () 32973..33494 - 522 WP_004118235.1 putative RNA polymerase sigma factor FecI VF
CSC13_RS00675 () 33970..34455 - 486 Protein_28 IS21 family transposase ISEc62 Transposase
CSC13_RS28735 () 34456..34668 - 213 WP_161989521.1 hypothetical protein -
CSC13_RS00680 () 34597..34764 + 168 WP_004118231.1 integrase -
CSC13_RS00685 () 35049..36176 + 1128 WP_004118840.1 transporter substrate-binding protein -
CSC13_RS00690 () 36173..36766 + 594 WP_004118229.1 ANTAR domain-containing protein -
CSC13_RS00695 () 36763..37611 + 849 WP_004152279.1 ABC transporter permease -
CSC13_RS00700 () 37611..38531 + 921 WP_004118227.1 ABC transporter permease -
CSC13_RS00705 () 38544..40148 + 1605 WP_004152278.1 ABC transporter substrate-binding protein -
CSC13_RS00710 () 40193..41140 + 948 WP_004118225.1 acetamidase/formamidase family protein -
CSC13_RS00715 () 41148..42881 + 1734 WP_004118832.1 Glutathione import ATP-binding protein GsiA VF
CSC13_RS00720 () 44702..45079 - 378 Protein_38 IS66 family transposase ISEc22 Transposase
CSC13_RS00725 () 45117..46654 - 1538 Protein_39 IS66 family transposase ISCfr14 Transposase
CSC13_RS00730 () 46704..47051 - 348 WP_004152557.1 IS66 family transposase ISCfr14 Transposase
CSC13_RS00735 () 47048..47425 - 378 WP_004114613.1 IS66 family transposase ISSgsp1 Transposase
CSC13_RS00740 () 47982..48617 - 636 WP_004118217.1 His-Xaa-Ser repeat protein HxsA -
CSC13_RS00745 () 48614..49726 - 1113 WP_000005560.1 His-Xaa-Ser system radical SAM maturase HxsC -
CSC13_RS00750 () 49719..51107 - 1389 WP_004118216.1 His-Xaa-Ser system radical SAM maturase HxsB -
CSC13_RS00755 () 51107..51379 - 273 WP_000333416.1 His-Xaa-Ser system protein HxsD -
CSC13_RS00760 () 51780..52474 + 695 Protein_46 IS3 family transposase ISEc36 Transposase
CSC13_RS00765 () 52540..53244 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
CSC13_RS00770 () 53450..53758 - 309 Protein_48 IS5 family transposase ISThi1 Transposase
CSC13_RS00775 () 54100..54927 + 828 WP_004153729.1 Glutamine transport ATP-binding protein GlnQ VF
CSC13_RS00780 () 54924..55787 + 864 WP_004152695.1 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein -
CSC13_RS00785 () 55796..56623 + 828 WP_004152694.1 phosphonate ABC transporter, permease protein PhnE -
CSC13_RS00790 () 56632..57642 + 1011 WP_004152693.1 phosphonate dehydrogenase PtxD -
CSC13_RS00795 () 57636..58505 + 870 WP_004152692.1 HTH-type transcriptional activator CmpR VF
CSC13_RS00800 () 58613..59132 + 520 Protein_54 IS5 family transposase ISPst7 Transposase
CSC13_RS00815 () 59714..60694 - 981 WP_000019473.1 IS5 family transposase ISKpn26 Transposase
CSC13_RS00820 () 60953..61650 - 698 Protein_56 IS1 family transposase IS1X2 Transposase
CSC13_RS00825 () 61835..61951 - 117 Protein_57 transposase domain-containing protein -
CSC13_RS28740 () 61896..62159 - 264 WP_004118209.1 transposase -
CSC13_RS28745 () 62174..62437 + 264 WP_004118208.1 hypothetical protein -
CSC13_RS00835 () 62681..62962 + 282 WP_004152118.1 helix-turn-helix domain-containing protein -
CSC13_RS00840 () 62997..63566 + 570 WP_004152117.1 Spore protein SP21 VF
CSC13_RS00845 () 63681..66476 + 2796 WP_004152116.1 ATP-dependent Clp protease ATP-binding subunit ClpC VF
CSC13_RS00850 () 66476..66673 + 198 WP_004152115.1 hypothetical protein -
CSC13_RS00860 () 66911..67660 + 750 WP_009483782.1 phosphate-starvation-inducible PsiE family protein -
CSC13_RS00865 () 67647..68609 + 963 WP_004152113.1 M48 family metalloprotease -
CSC13_RS00870 () 68697..69951 + 1255 Protein_66 IS3 family transposase ISKpn38 Transposase
CSC13_RS00875 () 70452..71798 - 1347 WP_020314316.1 ISNCY family transposase ISLad2 Transposase
CSC13_RS00880 () 72010..72492 - 483 WP_003026803.1 GNAT family N-acetyltransferase Toxin Detail
CSC13_RS00885 () 72480..72746 - 267 WP_003026799.1 DUF1778 domain-containing protein Antitoxin Detail
CSC13_RS00890 () 72922..73176 - 255 WP_004152108.1 hypothetical protein -
CSC13_RS00895 () 73252..73509 - 258 WP_004152107.1 hypothetical protein -
CSC13_RS00900 () 73558..73761 - 204 WP_004152106.1 hemolysin expression modulator Hha -
CSC13_RS00905 () 73795..74163 - 369 WP_004152105.1 hypothetical protein -
CSC13_RS00910 () 74207..74701 - 495 WP_004152104.1 DNA-binding protein -
CSC13_RS00915 () 74732..75307 - 576 WP_004152103.1 hypothetical protein -
CSC13_RS00920 () 75295..75564 - 270 WP_004152102.1 hypothetical protein -
CSC13_RS00925 () 75922..76272 + 351 WP_004152101.1 As(III)-sensing metalloregulatory transcriptional repressor ArsR -
CSC13_RS00930 () 76322..76684 + 363 WP_004152100.1 arsenite efflux transporter metallochaperone ArsD -
CSC13_RS00935 () 76702..78453 + 1752 WP_004152099.1 Arsenical pump-driving ATPase VF
CSC13_RS00940 () 78501..79790 + 1290 WP_004152098.1 arsenite efflux transporter membrane subunit ArsB -
CSC13_RS00945 () 79803..80228 + 426 WP_004152097.1 glutaredoxin-dependent arsenate reductase -
CSC13_RS00950 () 80261..80797 - 537 WP_004152096.1 GNAT family N-acetyltransferase -
CSC13_RS00955 () 80919..82669 - 1751 Protein_83 arsenical pump-driving ATPase -
CSC13_RS00960 () 82694..83056 - 363 WP_004152095.1 arsenic metallochaperone ArsD family protein -
CSC13_RS00965 () 83132..83677 - 546 WP_004182005.1 sigma-70 family RNA polymerase sigma factor -
CSC13_RS00970 () 83686..84399 - 714 WP_004152093.1 arsenical resistance protein ArsH -
CSC13_RS00975 () 84396..84722 - 327 WP_004152092.1 metalloregulator ArsR/SmtB family transcription factor -
CSC13_RS00980 () 85054..85551 + 498 WP_004152091.1 GNAT family N-acetyltransferase -
CSC13_RS00985 () 85601..86110 - 510 WP_031944101.1 aquaporin -
CSC13_RS00990 () 86172..87792 + 1621 Protein_90 ISL3 family transposase ISEc38 Transposase
CSC13_RS00995 () 87853..88032 + 180 WP_004152086.1 type II toxin-antitoxin system RelE/ParE family toxin -
CSC13_RS01000 () 88264..88698 - 435 WP_004152085.1 copper resistance system metallochaperone PcoE -
CSC13_RS01005 () 88915..90315 - 1401 WP_004152084.1 copper resistance membrane spanning protein PcoS -
CSC13_RS01010 () 90312..90992 - 681 WP_001188930.1 Transcriptional activator protein CopR VF
CSC13_RS01015 () 91047..91976 - 930 WP_004118344.1 copper resistance inner membrane protein PcoD -
CSC13_RS01020 () 91981..92361 - 381 WP_000025662.1 copper resistance system metallochaperone PcoC -
CSC13_RS01025 () 92401..93291 - 891 WP_001378118.1 copper resistance outer membrane transporter PcoB -
CSC13_RS01030 () 93297..95114 - 1818 WP_000925242.1 multicopper oxidase PcoA -
CSC13_RS01035 () 95348..95797 + 450 WP_001023257.1 copper resistance protein -
CSC13_RS01040 () 96086..96823 + 738 WP_004118669.1 Murein DD-endopeptidase MepM VF
CSC13_RS01045 () 96857..97054 - 198 WP_000843497.1 DUF2933 domain-containing protein -
CSC13_RS01050 () 97095..99542 - 2448 WP_004098955.1 Ag(+)-translocating P-type ATPase SilP -
CSC13_RS01055 () 99669..100109 - 441 WP_000758228.1 hypothetical protein -
CSC13_RS01060 () 100196..103342 - 3147 WP_004098958.1 Cu(+)/Ag(+) efflux RND transporter permease subunit SilA -
CSC13_RS01065 () 103353..104645 - 1293 WP_004152079.1 Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB -
CSC13_RS01070 () 104759..105112 - 354 WP_001246153.1 cation efflux system protein CusF -
CSC13_RS01075 () 105141..106526 - 1386 WP_000475512.1 Cation efflux system protein CusC VF
CSC13_RS01080 () 106716..107396 + 681 WP_001572351.1 Transcriptional regulatory protein CusR VF
CSC13_RS01085 () 107389..108864 + 1476 WP_003032875.1 copper/silver sensor histidine kinase SilS -
CSC13_RS01090 () 109115..109546 + 432 WP_004178091.1 silver-binding protein SilE -
CSC13_RS01095 () 109842..110384 - 543 Protein_111 ISL3 family transposase ISKpn25 Transposase
CSC13_RS01100 () 110400..110884 - 485 Protein_112 IS1 family transposase IS1X2 Transposase
CSC13_RS01105 () 110975..112182 + 1208 WP_085955172.1 IS3 family transposase ISEcl1 Transposase
CSC13_RS01115 () 112373..113070 + 698 Protein_114 IS1 family transposase IS1X2 Transposase
CSC13_RS01120 () 113222..115219 + 1998 WP_004178088.1 choline BCCT transporter BetT -
CSC13_RS01125 () 115282..116559 + 1278 WP_004152070.1 DUF2254 domain-containing protein -
CSC13_RS01130 () 117542..118996 - 1455 WP_020444838.1 putative cyclic di-GMP phosphodiesterase PdeB VF
CSC13_RS01135 () 119598..119855 + 258 WP_004197688.1 hypothetical protein -
CSC13_RS01140 () 120528..121496 - 969 WP_011977741.1 IS5 family transposase IS903B Transposase
CSC13_RS01150 () 121516..121827 + 312 WP_071527918.1 EAL domain-containing protein -
CSC13_RS01155 () 121854..122801 - 948 WP_004152065.1 sensor domain-containing diguanylate cyclase -
CSC13_RS01160 () 123945..124685 + 741 WP_001515717.1 tyrosine-type recombinase/integrase -
CSC13_RS01170 () 125402..126412 - 1011 WP_004152063.1 RepB family plasmid replication initiator protein -
CSC13_RS01175 () 127164..128330 + 1167 WP_000523813.1 Sporulation initiation inhibitor protein Soj VF
CSC13_RS01180 () 128330..129301 + 972 WP_004152062.1 ParB/RepB/Spo0J family plasmid partition protein -
CSC13_RS01195 () 130738..131936 + 1199 Protein_126 IS200-IS605 family transposase IS609 Transposase
CSC13_RS01200 () 131959..132174 - 216 Protein_127 type II toxin-antitoxin system Phd/YefM family antitoxin -
CSC13_RS01205 () 132253..133524 - 1272 WP_004152715.1 Y-family DNA polymerase -
CSC13_RS01210 () 133524..133949 - 426 WP_004178083.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
CSC13_RS01220 () 134352..135839 + 1488 WP_004178082.1 group II intron reverse transcriptase/maturase -
CSC13_RS01225 () 136073..136303 + 231 WP_004152753.1 hypothetical protein -
CSC13_RS01235 () 136824..137249 + 426 WP_004118478.1 antirestriction protein -
CSC13_RS01240 () 137486..137740 + 255 WP_004152754.1 DNA polymerase III subunit theta -
CSC13_RS01245 () 137775..138092 + 318 WP_004118473.1 hypothetical protein -
CSC13_RS01255 () 138874..139101 + 228 WP_004178072.1 hypothetical protein -
CSC13_RS01260 () 139193..139423 + 231 WP_004198570.1 hypothetical protein -
CSC13_RS01265 () 139475..140830 + 1356 WP_004178068.1 DUF3560 domain-containing protein -
CSC13_RS01270 () 140878..141441 + 564 WP_004152645.1 methyltransferase -
CSC13_RS01285 () 142217..142759 + 543 WP_004152644.1 single-stranded DNA-binding protein -
CSC13_RS01290 () 142808..143056 + 249 WP_004152643.1 DUF905 domain-containing protein -
CSC13_RS01295 () 143126..145162 + 2037 WP_004178066.1 ParB/RepB/Spo0J family partition protein -
CSC13_RS01300 () 145229..145660 + 432 WP_004152641.1 conjugation system SOS inhibitor PsiB -
CSC13_RS01305 () 145657..146385 + 729 WP_004152640.1 plasmid SOS inhibition protein A -
CSC13_RS01310 () 146382..146708 + 327 WP_004152639.1 hypothetical protein -
CSC13_RS01315 () 146764..147138 + 375 WP_004152638.1 hypothetical protein -
CSC13_RS01325 () 147316..148395 - 1080 WP_004220208.1 IS481 family transposase ISKpn28 Transposase
CSC13_RS01330 () 148467..148628 + 162 WP_004118124.1 type I toxin-antitoxin system Hok family toxin -
CSC13_RS01335 () 149328..149600 + 273 WP_004152759.1 hypothetical protein -
CSC13_RS01340 () 149597..149947 + 351 WP_004152758.1 hypothetical protein -
CSC13_RS01350 () 150583..150939 + 357 WP_004152717.1 hypothetical protein -
CSC13_RS01355 () 151000..151212 + 213 WP_004152718.1 hypothetical protein -
CSC13_RS01360 () 151223..151447 + 225 WP_004152719.1 hypothetical protein -
CSC13_RS01365 () 151528..151848 + 321 WP_004152720.1 type II toxin-antitoxin system RelE/ParE family toxin -
CSC13_RS01370 () 151838..152116 + 279 WP_004152721.1 helix-turn-helix domain-containing protein -
CSC13_RS01375 () 152117..152530 + 414 WP_004152722.1 helix-turn-helix domain-containing protein -
CSC13_RS01395 () 153364..154185 + 822 WP_004178064.1 DUF945 domain-containing protein -
CSC13_RS01400 () 154218..154547 + 330 WP_011977736.1 hypothetical protein -
CSC13_RS01405 () 154580..155065 - 486 WP_004178063.1 hypothetical protein VF
CSC13_RS01410 () 155499..155891 + 393 WP_004178062.1 relaxosome protein TraM -
CSC13_RS01415 () 156114..156800 + 687 WP_011977735.1 transcriptional regulator TraJ family protein -
CSC13_RS01420 () 156884..157255 + 372 WP_004208838.1 TraY domain-containing protein -
CSC13_RS01425 () 157309..157677 + 369 WP_004178060.1 type IV conjugative transfer system pilin TraA -
CSC13_RS01430 () 157691..157996 + 306 WP_004178059.1 type IV conjugative transfer system protein TraL -
CSC13_RS01435 () 158016..158582 + 567 WP_004152602.1 type IV conjugative transfer system protein TraE -
CSC13_RS01440 () 158569..159309 + 741 WP_004152601.1 type-F conjugative transfer system secretin TraK -
CSC13_RS01445 () 159309..160733 + 1425 WP_004152600.1 conjugal transfer protein TraB -
CSC13_RS01450 () 160726..161322 + 597 WP_004152599.1 conjugal transfer protein TraP -
CSC13_RS01455 () 161345..161914 + 570 WP_004152598.1 type IV conjugative transfer system lipoprotein TraV -
CSC13_RS01460 () 162046..162456 + 411 WP_004152597.1 lipase chaperone -
CSC13_RS01465 () 162461..162751 + 291 WP_004152596.1 hypothetical protein -
CSC13_RS01470 () 162775..162993 + 219 WP_004171484.1 hypothetical protein -
CSC13_RS01475 () 162994..163311 + 318 WP_004152595.1 hypothetical protein -
CSC13_RS01480 () 163378..163782 + 405 WP_004152594.1 hypothetical protein -
CSC13_RS01490 () 164078..164476 + 399 WP_004153071.1 hypothetical protein -
CSC13_RS01495 () 164548..167187 + 2640 WP_004152592.1 type IV secretion system protein TraC -
CSC13_RS01500 () 167187..167576 + 390 WP_004152591.1 type-F conjugative transfer system protein TrbI -
CSC13_RS01505 () 167576..168202 + 627 WP_004152590.1 type-F conjugative transfer system protein TraW -
CSC13_RS01510 () 168213..169205 + 993 WP_004178057.1 conjugal transfer pilus assembly protein TraU -
CSC13_RS01515 () 169218..169856 + 639 WP_004152682.1 type-F conjugative transfer system pilin assembly protein TrbC -
CSC13_RS01520 () 169904..171859 + 1956 WP_004153093.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
CSC13_RS01525 () 171891..172127 + 237 WP_004152683.1 conjugal transfer protein TrbE -
CSC13_RS01535 () 172355..172681 + 327 WP_004152685.1 hypothetical protein -
CSC13_RS01540 () 172702..173454 + 753 WP_004152686.1 type-F conjugative transfer system pilin assembly protein TraF -
CSC13_RS01545 () 173465..173704 + 240 WP_004152687.1 type-F conjugative transfer system pilin chaperone TraQ -
CSC13_RS01550 () 173676..174248 + 573 WP_004152688.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
CSC13_RS01555 () 174241..174669 + 429 WP_004152689.1 hypothetical protein -
CSC13_RS01560 () 174656..176026 + 1371 WP_004178055.1 conjugal transfer protein TraH -
CSC13_RS01565 () 176026..178875 + 2850 WP_004178054.1 conjugal transfer mating pair stabilization protein TraG -
CSC13_RS01570 () 178881..179408 + 528 WP_004153030.1 hypothetical protein -
CSC13_RS01575 () 179598..180329 + 732 WP_004152629.1 complement resistance protein TraT -
CSC13_RS01580 () 180710..181690 - 981 WP_000082736.1 IS5 family transposase ISEc68 Transposase
CSC13_RS01585 () 181890..184199 + 2310 Protein_192 type IV conjugative transfer system coupling protein TraD -
CSC13_RS01590 () 184199..189460 + 5262 WP_004153029.1 Multifunctional conjugation protein TraI Relaxase
CSC13_RS01595 () 189540..190265 + 726 WP_004152303.1 type-F conjugative transfer system pilin acetylase TraX -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance