MGE detailed information
MGE type: Prophage MGE length: 90979 bp
Accession: NZ_CP029128 Location: 5348648..5439626 Organism: Klebsiella oxytoca strain AR380 Replicon: chromosome
Accession: NZ_CP029128 Location: 5348648..5439626 Organism: Klebsiella oxytoca strain AR380 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC17_RS26330 () | 5343933..5344502 | + | 570 | WP_023321230.1 | VOC family protein | - |
| CSC17_RS26335 () | 5344579..5345322 | + | 744 | WP_016808313.1 | copper homeostasis protein CutC | - |
| CSC17_RS26345 () | 5345621..5346643 | - | 1023 | WP_004113808.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| CSC17_RS26350 () | 5346640..5347383 | - | 744 | WP_004103405.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| CSC17_RS26355 () | 5347423..5347818 | - | 396 | WP_004103403.1 | MAPEG family protein | - |
| CSC17_RS26360 () | 5347872..5348651 | - | 780 | Protein_4907 | DUF72 domain-containing protein | - |
| CSC17_RS26365 () | 5348648..5349907 | - | 1260 | WP_108704864.1 | Putative defective protein IntQ ; Integrase | Integrase |
| CSC17_RS26370 () | 5349950..5350195 | - | 246 | WP_023283988.1 | excisionase family protein | - |
| CSC17_RS26375 () | 5350355..5350570 | - | 216 | WP_108704865.1 | TraR/DksA family transcriptional regulator | - |
| CSC17_RS26380 () | 5350572..5350790 | - | 219 | WP_038989582.1 | hypothetical protein | - |
| CSC17_RS26385 () | 5350787..5352793 | - | 2007 | WP_108705085.1 | phage N-6-adenine-methyltransferase | - |
| CSC17_RS26390 () | 5352808..5352966 | - | 159 | WP_046878446.1 | DUF1317 family protein | - |
| CSC17_RS26395 () | 5352963..5353643 | - | 681 | WP_108704866.1 | YqaJ viral recombinase family protein | - |
| CSC17_RS26400 () | 5353640..5354485 | - | 846 | WP_108704867.1 | phage recombination protein Bet | - |
| CSC17_RS26405 () | 5354501..5354785 | - | 285 | WP_108704868.1 | host nuclease inhibitor GamL | - |
| CSC17_RS26410 () | 5354793..5355764 | - | 972 | WP_108704869.1 | hypothetical protein | - |
| CSC17_RS26415 () | 5355853..5356047 | - | 195 | WP_019725103.1 | hypothetical protein | - |
| CSC17_RS29465 () | 5356040..5356165 | - | 126 | WP_162556180.1 | hypothetical protein | - |
| CSC17_RS26420 () | 5356578..5357174 | - | 597 | WP_077266559.1 | helix-turn-helix domain-containing protein | - |
| CSC17_RS26425 () | 5357282..5357494 | + | 213 | WP_064349506.1 | helix-turn-helix domain-containing protein | - |
| CSC17_RS26430 () | 5357515..5357835 | + | 321 | WP_064349508.1 | hypothetical protein | - |
| CSC17_RS29470 () | 5357922..5358068 | + | 147 | WP_162556126.1 | hypothetical protein | - |
| CSC17_RS26435 () | 5358109..5358960 | + | 852 | WP_162556127.1 | DNA replication protein | - |
| CSC17_RS26440 () | 5358965..5360380 | + | 1416 | WP_162556182.1 | AAA family ATPase | - |
| CSC17_RS26445 () | 5360380..5360682 | + | 303 | WP_108704872.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| CSC17_RS26450 () | 5360679..5361104 | + | 426 | WP_108704873.1 | hypothetical protein | - |
| CSC17_RS26455 () | 5361101..5361496 | + | 396 | WP_108704874.1 | hypothetical protein | - |
| CSC17_RS26460 () | 5361489..5361947 | + | 459 | WP_108704875.1 | plasmid protein | - |
| CSC17_RS26465 () | 5361944..5362435 | + | 492 | WP_108704876.1 | ead/Ea22-like family protein | - |
| CSC17_RS26470 () | 5362435..5362950 | + | 516 | WP_108704877.1 | hypothetical protein | - |
| CSC17_RS26475 () | 5362947..5363645 | + | 699 | WP_108704878.1 | hypothetical protein | - |
| CSC17_RS26480 () | 5363632..5364270 | + | 639 | WP_108704879.1 | hypothetical protein | - |
| CSC17_RS26485 () | 5364359..5364616 | + | 258 | WP_108704880.1 | DNA polymerase III subunit theta | - |
| CSC17_RS26490 () | 5364807..5365256 | + | 450 | WP_064349536.1 | recombination protein NinB | - |
| CSC17_RS26495 () | 5365249..5365419 | + | 171 | WP_108704881.1 | hypothetical protein | - |
| CSC17_RS26500 () | 5365412..5365702 | + | 291 | WP_028013586.1 | DUF1364 domain-containing protein | - |
| CSC17_RS26505 () | 5365699..5366061 | + | 363 | WP_108704882.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CSC17_RS26510 () | 5366058..5366198 | + | 141 | WP_108704883.1 | YlcG family protein | - |
| CSC17_RS26515 () | 5366195..5366695 | + | 501 | WP_032737394.1 | antiterminator | - |
| CSC17_RS26525 () | 5367135..5367338 | + | 204 | WP_032729783.1 | phage holin family protein | - |
| CSC17_RS26530 () | 5367316..5367813 | + | 498 | WP_108705086.1 | lysozyme | - |
| CSC17_RS26535 () | 5367810..5368271 | + | 462 | WP_108704884.1 | lysis protein | - |
| CSC17_RS26540 () | 5368722..5369462 | + | 741 | WP_108704885.1 | hypothetical protein | - |
| CSC17_RS26545 () | 5369466..5370797 | + | 1332 | WP_108704886.1 | terminase family protein | - |
| CSC17_RS26550 () | 5370809..5372227 | + | 1419 | WP_108704887.1 | DUF1073 domain-containing protein | - |
| CSC17_RS26555 () | 5372224..5373045 | + | 822 | WP_108704888.1 | hypothetical protein | - |
| CSC17_RS26560 () | 5373058..5374671 | + | 1614 | WP_108704889.1 | NUDIX domain-containing protein | - |
| CSC17_RS26565 () | 5374687..5375547 | + | 861 | WP_108704890.1 | hypothetical protein | - |
| CSC17_RS26570 () | 5375561..5376592 | + | 1032 | WP_108704891.1 | DUF2184 domain-containing protein | - |
| CSC17_RS26575 () | 5376664..5377146 | + | 483 | WP_017898838.1 | hypothetical protein | - |
| CSC17_RS26580 () | 5377143..5377571 | + | 429 | WP_023283949.1 | hypothetical protein | - |
| CSC17_RS26585 () | 5377568..5378002 | + | 435 | WP_108704892.1 | hypothetical protein | - |
| CSC17_RS26590 () | 5377986..5378924 | + | 939 | WP_001139600.1 | hypothetical protein | - |
| CSC17_RS26595 () | 5378929..5380323 | + | 1395 | WP_108704893.1 | hypothetical protein | - |
| CSC17_RS26600 () | 5380327..5380764 | + | 438 | WP_108704894.1 | hypothetical protein | - |
| CSC17_RS26605 () | 5380768..5381340 | + | 573 | WP_108704895.1 | hypothetical protein | - |
| CSC17_RS26610 () | 5381464..5383284 | + | 1821 | WP_108705087.1 | hypothetical protein | - |
| CSC17_RS26615 () | 5383287..5384012 | + | 726 | WP_108704896.1 | hypothetical protein | - |
| CSC17_RS26620 () | 5384009..5384284 | + | 276 | WP_108704897.1 | hypothetical protein | - |
| CSC17_RS26625 () | 5384284..5385252 | + | 969 | WP_108704898.1 | hypothetical protein | - |
| CSC17_RS26630 () | 5385255..5385971 | + | 717 | WP_108704899.1 | hypothetical protein | - |
| CSC17_RS26635 () | 5385968..5386300 | + | 333 | WP_108704900.1 | hypothetical protein | - |
| CSC17_RS26640 () | 5386297..5387715 | + | 1419 | WP_108704901.1 | baseplate J/gp47 family protein | - |
| CSC17_RS26645 () | 5387717..5388421 | + | 705 | WP_108704902.1 | hypothetical protein | - |
| CSC17_RS26650 () | 5388476..5388994 | + | 519 | WP_108704903.1 | hypothetical protein | - |
| CSC17_RS26655 () | 5389058..5391409 | + | 2352 | WP_108704904.1 | GDSL family lipase | - |
| CSC17_RS26660 () | 5391412..5392188 | + | 777 | WP_108704905.1 | hypothetical protein | - |
| CSC17_RS26670 () | 5392668..5393714 | + | 1047 | WP_108704907.1 | hypothetical protein | - |
| CSC17_RS26675 () | 5393939..5394505 | - | 567 | WP_064397741.1 | hydrolase | - |
| CSC17_RS26680 () | 5394775..5396562 | + | 1788 | WP_004103400.1 | aspartate--tRNA ligase | - |
| CSC17_RS26685 () | 5396564..5397007 | + | 444 | WP_004103398.1 | dihydroneopterin triphosphate diphosphatase | - |
| CSC17_RS26690 () | 5397157..5397897 | + | 741 | WP_004103396.1 | putative transcriptional regulatory protein YebC | VF |
| CSC17_RS26695 () | 5398052..5398573 | + | 522 | WP_004113791.1 | crossover junction endodeoxyribonuclease RuvC | - |
| CSC17_RS26700 () | 5398687..5399349 | + | 663 | WP_108704908.1 | hypothetical protein | - |
| CSC17_RS26705 () | 5399473..5400084 | + | 612 | WP_004103390.1 | Holliday junction branch migration protein RuvA | - |
| CSC17_RS26710 () | 5400093..5401103 | + | 1011 | WP_004103386.1 | Holliday junction branch migration DNA helicase RuvB | - |
| CSC17_RS26715 () | 5401311..5402096 | - | 786 | WP_070556964.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| CSC17_RS26720 () | 5402096..5402848 | - | 753 | WP_108704909.1 | Zinc import ATP-binding protein ZnuC | VF |
| CSC17_RS26725 () | 5402927..5403871 | + | 945 | WP_016808309.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| CSC17_RS26730 () | 5403887..5405209 | + | 1323 | WP_108704910.1 | murein DD-endopeptidase MepM | - |
| CSC17_RS26735 () | 5405327..5406301 | + | 975 | WP_004103380.1 | Lipid A biosynthesis myristoyltransferase | VF |
| CSC17_RS26740 () | 5406372..5407814 | - | 1443 | WP_004103379.1 | pyruvate kinase | - |
| CSC17_RS26745 () | 5407940..5408809 | - | 870 | WP_004103378.1 | MurR/RpiR family transcriptional regulator | - |
| CSC17_RS26750 () | 5409171..5410646 | + | 1476 | WP_004103371.1 | glucose-6-phosphate dehydrogenase | - |
| CSC17_RS26755 () | 5410867..5412678 | + | 1812 | WP_004103369.1 | phosphogluconate dehydratase | - |
| CSC17_RS26760 () | 5412716..5413357 | + | 642 | WP_004103368.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| CSC17_RS26765 () | 5413411..5414589 | - | 1179 | WP_004103366.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| CSC17_RS26770 () | 5414725..5415087 | + | 363 | WP_017145640.1 | YebG family protein | - |
| CSC17_RS26775 () | 5415236..5415916 | + | 681 | WP_017145641.1 | DUF533 domain-containing protein | - |
| CSC17_RS26780 () | 5416050..5418110 | + | 2061 | WP_016808307.1 | oligopeptidase B | - |
| CSC17_RS26785 () | 5418117..5418776 | - | 660 | WP_004103360.1 | exodeoxyribonuclease X | - |
| CSC17_RS26790 () | 5418855..5419085 | - | 231 | WP_004103351.1 | DNA polymerase III subunit theta | - |
| CSC17_RS26795 () | 5419221..5419595 | + | 375 | WP_016808306.1 | CopC domain-containing protein YobA | - |
| CSC17_RS26800 () | 5419600..5420469 | + | 870 | WP_108704911.1 | copper homeostasis membrane protein CopD | - |
| CSC17_RS26805 () | 5420486..5420824 | + | 339 | WP_023321222.1 | YebY family protein | - |
| - () | 5420946..5421091 | - | 146 | - | - | Antitoxin Detail |
| - () | 5420981..5421084 | + | 104 | - | - | Toxin Detail |
| CSC17_RS26810 () | 5421211..5422170 | - | 960 | WP_004113762.1 | spore coat U domain-containing protein | - |
| CSC17_RS26815 () | 5422182..5424515 | - | 2334 | WP_108704912.1 | Outer membrane usher protein SfmD | VF |
| CSC17_RS26820 () | 5424518..5425282 | - | 765 | WP_016808303.1 | hypothetical protein | VF |
| CSC17_RS26825 () | 5425300..5425818 | - | 519 | WP_070557030.1 | hypothetical protein | VF |
| CSC17_RS26830 () | 5425841..5426392 | - | 552 | WP_004103335.1 | hypothetical protein | VF |
| CSC17_RS29475 () | 5426971..5427114 | - | 144 | WP_142447463.1 | Ecr family regulatory small membrane protein | - |
| CSC17_RS26835 () | 5427226..5428170 | - | 945 | WP_064397719.1 | VirK/YbjX family protein | - |
| CSC17_RS26840 () | 5428336..5428989 | + | 654 | WP_108704913.1 | protein-serine/threonine phosphatase | - |
| CSC17_RS26845 () | 5428986..5429177 | - | 192 | WP_004103330.1 | YebW family protein | - |
| CSC17_RS26850 () | 5429276..5429515 | - | 240 | WP_004103329.1 | YebV family protein | - |
| CSC17_RS26855 () | 5429631..5431064 | - | 1434 | WP_072031422.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| CSC17_RS26860 () | 5431143..5433776 | - | 2634 | WP_108704914.1 | hypothetical protein | VF |
| CSC17_RS26865 () | 5433745..5435028 | - | 1284 | WP_016808294.1 | membrane integrity lipid transport subunit YebS | - |
| CSC17_RS26870 () | 5435161..5435658 | + | 498 | WP_016808293.1 | GAF domain-containing protein | - |
| CSC17_RS26875 () | 5435756..5436439 | + | 684 | WP_004103320.1 | RNA chaperone ProQ | - |
| CSC17_RS26880 () | 5436459..5438507 | + | 2049 | WP_004113745.1 | carboxy terminal-processing peptidase | - |
| CSC17_RS26885 () | 5438745..5439626 | + | 882 | WP_004113743.1 | protease HtpX | - |
| CSC17_RS26890 () | 5439699..5441072 | - | 1374 | WP_004103315.1 | MFS transporter | - |
| CSC17_RS26895 () | 5441250..5442041 | + | 792 | WP_004103314.1 | DNA-binding transcriptional regulator KdgR | - |
| CSC17_RS26900 () | 5442087..5442326 | - | 240 | WP_004103313.1 | hypothetical protein | - |
| CSC17_RS26905 () | 5442486..5442629 | + | 144 | WP_041146201.1 | PhoP/PhoQ regulator MgrB | - |
| CSC17_RS26910 () | 5442704..5442994 | + | 291 | WP_070556951.1 | YebO family protein | - |
| CSC17_RS26915 () | 5443607..5443723 | + | 117 | WP_004134862.1 | YobF family protein | - |
| CSC17_RS26920 () | 5443764..5443973 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|