MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 87848 bp
Accession: NZ_CP029097 Location: 1479588..1567435 Organism: Pseudomonas aeruginosa strain AR439 Replicon: chromosome
Accession: NZ_CP029097 Location: 1479588..1567435 Organism: Pseudomonas aeruginosa strain AR439 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC26_RS09330 () | 1474743..1475705 | + | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
| CSC26_RS09335 () | 1475702..1476430 | + | 729 | WP_003102588.1 | peptidoglycan editing factor PgeF | - |
| CSC26_RS09340 () | 1476586..1479150 | + | 2565 | WP_003145976.1 | ATP-dependent chaperone ClpB | - |
| CSC26_RS09360 () | 1480003..1481283 | - | 1281 | WP_023101469.1 | Cephalosporin-C deacetylase ; Integrase | Integrase |
| CSC26_RS09365 () | 1481280..1483199 | - | 1920 | WP_023101468.1 | helicase/relaxase domain-containing protein | - |
| CSC26_RS36910 () | 1483218..1483472 | - | 255 | WP_123906486.1 | hypothetical protein | - |
| CSC26_RS09370 () | 1483585..1484747 | + | 1163 | WP_088477278.1 | IS3 family transposase IS222 | Transposase |
| CSC26_RS09375 () | 1484883..1485122 | + | 240 | WP_010792230.1 | hypothetical protein | - |
| CSC26_RS09380 () | 1485148..1486062 | + | 915 | WP_003119431.1 | hypothetical protein | - |
| CSC26_RS09385 () | 1486089..1486442 | - | 354 | WP_003111729.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CSC26_RS09390 () | 1486446..1486718 | - | 273 | WP_003111730.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| CSC26_RS36915 () | 1486837..1487187 | + | 351 | WP_071535247.1 | hypothetical protein | - |
| CSC26_RS09395 () | 1487225..1488736 | - | 1512 | WP_019484419.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| CSC26_RS09400 () | 1488733..1489080 | - | 348 | WP_012076881.1 | hypothetical protein | - |
| CSC26_RS09405 () | 1489080..1490462 | - | 1383 | WP_023101466.1 | integrating conjugative element protein | - |
| CSC26_RS09410 () | 1490480..1491418 | - | 939 | WP_019484421.1 | TIGR03756 family integrating conjugative element protein | - |
| CSC26_RS09415 () | 1491418..1491849 | - | 432 | WP_019484422.1 | TIGR03757 family integrating conjugative element protein | - |
| CSC26_RS09425 () | 1492545..1493174 | + | 630 | WP_171902868.1 | hypothetical protein | - |
| CSC26_RS09430 () | 1493990..1494208 | + | 219 | WP_019484423.1 | hypothetical protein | - |
| CSC26_RS09435 () | 1494205..1494864 | - | 660 | WP_019484424.1 | DsbA family protein | - |
| CSC26_RS09440 () | 1494861..1495145 | - | 285 | WP_003086159.1 | hypothetical protein | - |
| CSC26_RS09445 () | 1495142..1498084 | - | 2943 | WP_023083782.1 | conjugative transfer ATPase | - |
| CSC26_RS09450 () | 1498084..1498527 | - | 444 | WP_023083781.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| CSC26_RS09455 () | 1498505..1500010 | - | 1506 | WP_019484427.1 | TIGR03752 family integrating conjugative element protein | - |
| CSC26_RS09460 () | 1499994..1500878 | - | 885 | WP_019484428.1 | TIGR03749 family integrating conjugative element protein | - |
| CSC26_RS09465 () | 1500875..1501534 | - | 660 | WP_003117079.1 | TIGR03746 family integrating conjugative element protein | - |
| CSC26_RS09470 () | 1501531..1501917 | - | 387 | WP_003117078.1 | TIGR03750 family conjugal transfer protein | - |
| CSC26_RS09475 () | 1501928..1502284 | - | 357 | WP_003117077.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| CSC26_RS09480 () | 1502302..1502541 | - | 240 | WP_003121019.1 | TIGR03758 family integrating conjugative element protein | - |
| CSC26_RS09485 () | 1502538..1502876 | - | 339 | WP_003158157.1 | RAQPRD family integrative conjugative element protein | - |
| CSC26_RS09490 () | 1502970..1503269 | - | 300 | WP_003117075.1 | hypothetical protein | - |
| CSC26_RS09495 () | 1503442..1503753 | + | 312 | WP_003117074.1 | DUF2845 domain-containing protein | - |
| CSC26_RS36920 () | 1503799..1504908 | - | 1110 | WP_003121016.1 | hypothetical protein | - |
| CSC26_RS09505 () | 1505040..1506521 | - | 1482 | WP_003117073.1 | UvrD-helicase domain-containing protein | - |
| CSC26_RS09510 () | 1506763..1507254 | - | 492 | WP_003099826.1 | hypothetical protein | - |
| CSC26_RS09515 () | 1507272..1508018 | - | 747 | WP_003099824.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| CSC26_RS09520 () | 1508018..1510249 | - | 2232 | WP_003099821.1 | type IV conjugative transfer system coupling protein TraD | - |
| CSC26_RS09525 () | 1510253..1510459 | - | 207 | WP_073689213.1 | hypothetical protein | - |
| CSC26_RS09530 () | 1510531..1511031 | - | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| CSC26_RS09535 () | 1511028..1511609 | - | 582 | WP_003117072.1 | hypothetical protein | VF |
| CSC26_RS09540 () | 1511594..1512349 | - | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| CSC26_RS09545 () | 1512360..1513058 | - | 699 | WP_023094353.1 | hypothetical protein | - |
| CSC26_RS09550 () | 1513276..1513548 | + | 273 | WP_003125312.1 | hypothetical protein | - |
| CSC26_RS09560 () | 1514375..1514698 | - | 324 | WP_003158159.1 | hypothetical protein | - |
| CSC26_RS09565 () | 1514717..1515109 | - | 393 | WP_003158160.1 | hypothetical protein | - |
| CSC26_RS09575 () | 1515661..1516257 | - | 597 | WP_003158161.1 | VWA domain-containing protein | - |
| CSC26_RS36925 () | 1516242..1516826 | - | 585 | WP_044265603.1 | hypothetical protein | - |
| CSC26_RS09585 () | 1516851..1517225 | - | 375 | WP_003158163.1 | hypothetical protein | - |
| CSC26_RS09600 () | 1518089..1518772 | - | 684 | WP_003158165.1 | SOS response-associated peptidase family protein | - |
| CSC26_RS09605 () | 1518877..1519307 | + | 431 | Protein_1347 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CSC26_RS09610 () | 1519333..1519494 | - | 162 | Protein_1348 | helicase | - |
| CSC26_RS09615 () | 1519600..1521045 | - | 1446 | WP_003158168.1 | class I SAM-dependent methyltransferase | - |
| CSC26_RS09620 () | 1521075..1521680 | - | 606 | WP_003158169.1 | hypothetical protein | - |
| CSC26_RS09625 () | 1521773..1522027 | - | 255 | WP_003117062.1 | hypothetical protein | - |
| CSC26_RS09630 () | 1522095..1522457 | - | 363 | WP_003117061.1 | hypothetical protein | - |
| CSC26_RS09635 () | 1522527..1522802 | - | 276 | WP_003117060.1 | hypothetical protein | - |
| CSC26_RS09640 () | 1522799..1523431 | - | 633 | WP_003158170.1 | DUF3275 family protein | - |
| CSC26_RS09645 () | 1523488..1523838 | - | 351 | WP_003099791.1 | hypothetical protein | - |
| CSC26_RS09650 () | 1524074..1524781 | - | 708 | WP_003117058.1 | hypothetical protein | - |
| CSC26_RS09660 () | 1525266..1525463 | - | 198 | WP_003117057.1 | hypothetical protein | - |
| CSC26_RS37235 () | 1525537..1525695 | - | 159 | WP_003109368.1 | hypothetical protein | - |
| CSC26_RS09665 () | 1525833..1526312 | - | 480 | WP_003117056.1 | DUF3577 domain-containing protein | - |
| CSC26_RS37240 () | 1526773..1526946 | - | 174 | WP_003158172.1 | hypothetical protein | - |
| CSC26_RS37245 () | 1527021..1527266 | - | 246 | WP_003117055.1 | hypothetical protein | - |
| CSC26_RS09680 () | 1528329..1528766 | - | 438 | WP_003117054.1 | Transcriptional repressor PaaX | VF |
| CSC26_RS09685 () | 1528784..1530163 | - | 1380 | WP_003117053.1 | hypothetical protein | VF |
| CSC26_RS09690 () | 1530156..1531112 | - | 957 | WP_003117051.1 | Salicyloyl-CoA 5-hydroxylase | VF |
| CSC26_RS09695 () | 1531109..1531639 | - | 531 | WP_003099765.1 | putative enoyl-CoA hydratase echA12 | VF |
| CSC26_RS09700 () | 1531661..1532740 | - | 1080 | WP_003099764.1 | hypothetical protein | VF |
| CSC26_RS09705 () | 1532740..1534320 | - | 1581 | WP_003099761.1 | Ornithine carbamoyltransferase | VF |
| CSC26_RS09710 () | 1534329..1534862 | - | 534 | WP_003099760.1 | type IV pilus biogenesis protein PilP | - |
| CSC26_RS09715 () | 1534852..1536177 | - | 1326 | WP_003099758.1 | type 4b pilus protein PilO2 | - |
| CSC26_RS09720 () | 1536181..1537890 | - | 1710 | WP_012076860.1 | hypothetical protein | VF |
| CSC26_RS09725 () | 1537890..1539014 | - | 1125 | WP_012076859.1 | Na(+)/H(+)-K(+) antiporter GerN | VF |
| CSC26_RS09730 () | 1539216..1539515 | + | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CSC26_RS09735 () | 1539512..1539802 | + | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| CSC26_RS09740 () | 1539873..1540217 | - | 345 | WP_016851612.1 | hypothetical protein | - |
| CSC26_RS09745 () | 1540358..1542334 | - | 1977 | WP_016851611.1 | DEAD/DEAH box helicase | - |
| CSC26_RS09750 () | 1542331..1544220 | - | 1890 | WP_016851610.1 | hypothetical protein | - |
| CSC26_RS09755 () | 1544442..1544651 | - | 210 | WP_003105733.1 | cold-shock protein | - |
| CSC26_RS09760 () | 1544958..1546877 | - | 1920 | WP_023101571.1 | type I DNA topoisomerase | - |
| CSC26_RS09765 () | 1546993..1547160 | - | 168 | WP_170323396.1 | CrpP family protein | - |
| CSC26_RS09770 () | 1547405..1547599 | - | 195 | WP_016851608.1 | hypothetical protein | - |
| CSC26_RS09775 () | 1547705..1548163 | - | 459 | WP_016851607.1 | single-stranded DNA-binding protein | - |
| CSC26_RS09780 () | 1548193..1549023 | - | 831 | WP_012076855.1 | phage regulatory protein | - |
| CSC26_RS09785 () | 1549071..1549619 | - | 549 | WP_016851606.1 | DUF3158 family protein | - |
| CSC26_RS09790 () | 1549625..1550353 | - | 729 | WP_016851605.1 | TIGR03761 family integrating conjugative element protein | - |
| CSC26_RS09795 () | 1550510..1550707 | - | 198 | WP_019485319.1 | hypothetical protein | - |
| CSC26_RS09800 () | 1551961..1553286 | - | 1326 | WP_019484535.1 | hypothetical protein | - |
| CSC26_RS09805 () | 1553283..1554050 | - | 768 | WP_004352844.1 | DUF2857 domain-containing protein | - |
| CSC26_RS09810 () | 1554078..1555811 | - | 1734 | WP_019484534.1 | ParB family protein | - |
| CSC26_RS09815 () | 1555808..1556077 | - | 270 | WP_003117035.1 | Arc family DNA-binding protein | - |
| CSC26_RS09820 () | 1556098..1556988 | - | 891 | WP_003117034.1 | DNA adenine methylase | - |
| CSC26_RS09825 () | 1556985..1558007 | - | 1023 | WP_023124916.1 | nucleoid-associated protein YejK | - |
| CSC26_RS09830 () | 1558007..1558240 | - | 234 | WP_019486083.1 | hypothetical protein | - |
| CSC26_RS36930 () | 1558233..1558730 | - | 498 | WP_123796553.1 | hypothetical protein | - |
| CSC26_RS09835 () | 1558723..1558980 | - | 258 | WP_019486081.1 | hypothetical protein | - |
| CSC26_RS09840 () | 1558977..1559504 | - | 528 | WP_003141385.1 | hypothetical protein | - |
| CSC26_RS09845 () | 1559494..1559679 | - | 186 | WP_019486080.1 | hypothetical protein | - |
| CSC26_RS36935 () | 1559857..1560303 | + | 447 | WP_003117028.1 | hypothetical protein | - |
| CSC26_RS09855 () | 1560742..1562085 | - | 1344 | WP_019486079.1 | replicative DNA helicase | - |
| CSC26_RS09860 () | 1562082..1562300 | - | 219 | WP_003122068.1 | hypothetical protein | - |
| CSC26_RS09865 () | 1562284..1562991 | - | 708 | WP_003122069.1 | HNH endonuclease | - |
| CSC26_RS09870 () | 1562988..1563689 | - | 702 | WP_004347982.1 | DUF2786 domain-containing protein | - |
| CSC26_RS09875 () | 1563689..1564375 | - | 687 | WP_003122071.1 | hypothetical protein | - |
| CSC26_RS09880 () | 1564372..1565193 | - | 822 | WP_019486078.1 | hypothetical protein | - |
| CSC26_RS09885 () | 1565199..1565696 | - | 498 | WP_003111783.1 | hypothetical protein | - |
| CSC26_RS09890 () | 1565693..1566430 | - | 738 | WP_019486077.1 | hypothetical protein | - |
| CSC26_RS09895 () | 1566432..1567298 | - | 867 | WP_003111785.1 | ParA family protein | - |
| CSC26_RS09900 () | 1567664..1571863 | - | 4200 | WP_023083207.1 | two-partner secretion system exoprotein TpsA4 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|