MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 94478 bp
Accession: NZ_CP029090 Location: 4891592..4986069 Organism: Pseudomonas aeruginosa strain AR442 Replicon: chromosome
Accession: NZ_CP029090 Location: 4891592..4986069 Organism: Pseudomonas aeruginosa strain AR442 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC29_RS23965 () | 4887217..4891362 | + | 4146 | WP_023465251.1 | two-partner secretion system exoprotein TpsA4 | - |
| CSC29_RS23970 () | 4891729..4892595 | + | 867 | WP_003120956.1 | ParA family protein | - |
| CSC29_RS23975 () | 4892597..4893334 | + | 738 | WP_016852973.1 | hypothetical protein | - |
| CSC29_RS23980 () | 4893331..4893822 | + | 492 | WP_016852972.1 | hypothetical protein | - |
| CSC29_RS23985 () | 4893828..4894481 | + | 654 | WP_016852971.1 | hypothetical protein | - |
| CSC29_RS23990 () | 4894478..4895161 | + | 684 | WP_016852970.1 | hypothetical protein | - |
| CSC29_RS23995 () | 4895161..4895862 | + | 702 | WP_016852969.1 | DUF2786 domain-containing protein | - |
| CSC29_RS24000 () | 4895859..4896566 | + | 708 | WP_016852968.1 | HNH endonuclease | - |
| CSC29_RS24005 () | 4896550..4896768 | + | 219 | WP_003122068.1 | hypothetical protein | - |
| CSC29_RS24010 () | 4896765..4898108 | + | 1344 | WP_016852967.1 | replicative DNA helicase | - |
| CSC29_RS35745 () | 4898547..4898993 | - | 447 | WP_003117028.1 | hypothetical protein | - |
| CSC29_RS24020 () | 4899171..4899356 | + | 186 | WP_016852966.1 | hypothetical protein | - |
| CSC29_RS24025 () | 4899346..4899873 | + | 528 | WP_016852965.1 | hypothetical protein | - |
| CSC29_RS24030 () | 4899870..4900127 | + | 258 | WP_004352848.1 | hypothetical protein | - |
| CSC29_RS24035 () | 4900120..4900359 | + | 240 | WP_016852964.1 | hypothetical protein | - |
| CSC29_RS24040 () | 4900352..4900585 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| CSC29_RS24045 () | 4900585..4901607 | + | 1023 | WP_019416389.1 | nucleoid-associated protein YejK | - |
| CSC29_RS24050 () | 4901604..4902494 | + | 891 | WP_016851600.1 | DNA adenine methylase | - |
| CSC29_RS24055 () | 4902515..4902784 | + | 270 | WP_003117035.1 | Arc family DNA-binding protein | - |
| CSC29_RS24060 () | 4902781..4904517 | + | 1737 | WP_023464346.1 | ParB family protein | - |
| CSC29_RS24065 () | 4904545..4905312 | + | 768 | WP_016851602.1 | DUF2857 domain-containing protein | - |
| CSC29_RS24070 () | 4905309..4906613 | + | 1305 | WP_023101569.1 | hypothetical protein | - |
| CSC29_RS35750 () | 4906619..4907638 | - | 1020 | WP_024100015.1 | hypothetical protein | - |
| CSC29_RS24080 () | 4907666..4907863 | + | 198 | WP_019396765.1 | hypothetical protein | - |
| CSC29_RS24085 () | 4908020..4908748 | + | 729 | WP_016851605.1 | TIGR03761 family integrating conjugative element protein | - |
| CSC29_RS24090 () | 4908754..4909302 | + | 549 | WP_016851606.1 | DUF3158 family protein | - |
| CSC29_RS24095 () | 4909350..4910180 | + | 831 | WP_012076855.1 | phage regulatory protein | - |
| CSC29_RS24100 () | 4910210..4910668 | + | 459 | WP_016851607.1 | single-stranded DNA-binding protein | - |
| CSC29_RS24105 () | 4910774..4910968 | + | 195 | WP_016851608.1 | hypothetical protein | - |
| CSC29_RS24110 () | 4911213..4911380 | + | 168 | WP_170323396.1 | CrpP family protein | - |
| CSC29_RS24115 () | 4911496..4913415 | + | 1920 | WP_023101571.1 | type I DNA topoisomerase | - |
| CSC29_RS24120 () | 4913722..4913931 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| CSC29_RS24125 () | 4914153..4916042 | + | 1890 | WP_016851610.1 | hypothetical protein | - |
| CSC29_RS24130 () | 4916039..4918015 | + | 1977 | WP_016851611.1 | DEAD/DEAH box helicase | - |
| CSC29_RS24135 () | 4918156..4918500 | + | 345 | WP_016851612.1 | hypothetical protein | - |
| CSC29_RS24140 () | 4918571..4918861 | - | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| CSC29_RS24145 () | 4918858..4919157 | - | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CSC29_RS24150 () | 4919359..4920483 | + | 1125 | WP_012076859.1 | hypothetical protein | VF |
| CSC29_RS24155 () | 4920483..4922192 | + | 1710 | WP_012076860.1 | Outer membrane lipoprotein BfpB | VF |
| CSC29_RS24160 () | 4922196..4923521 | + | 1326 | WP_003099758.1 | type 4b pilus protein PilO2 | - |
| CSC29_RS24165 () | 4923511..4924044 | + | 534 | WP_003099760.1 | type IV pilus biogenesis protein PilP | - |
| CSC29_RS24170 () | 4924053..4925633 | + | 1581 | WP_003099761.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| CSC29_RS24175 () | 4925633..4926712 | + | 1080 | WP_003099764.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| CSC29_RS24180 () | 4926734..4927264 | + | 531 | WP_003099765.1 | hypothetical protein | VF |
| CSC29_RS24185 () | 4927261..4928217 | + | 957 | WP_003117051.1 | Twitching mobility protein | VF |
| CSC29_RS24190 () | 4928210..4929589 | + | 1380 | WP_003117053.1 | hypothetical protein | VF |
| CSC29_RS24195 () | 4929607..4930044 | + | 438 | WP_003117054.1 | hypothetical protein | VF |
| CSC29_RS36110 () | 4931107..4931352 | + | 246 | WP_003117055.1 | hypothetical protein | - |
| CSC29_RS36115 () | 4931427..4931600 | + | 174 | WP_003158172.1 | hypothetical protein | - |
| CSC29_RS24210 () | 4932061..4932540 | + | 480 | WP_003117056.1 | DUF3577 domain-containing protein | - |
| CSC29_RS36120 () | 4932678..4932836 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| CSC29_RS24215 () | 4932910..4933107 | + | 198 | WP_003117057.1 | hypothetical protein | - |
| CSC29_RS24225 () | 4933592..4934299 | + | 708 | WP_003117058.1 | hypothetical protein | - |
| CSC29_RS24230 () | 4934535..4934885 | + | 351 | WP_003099791.1 | hypothetical protein | - |
| CSC29_RS24235 () | 4934942..4935574 | + | 633 | WP_003158170.1 | DUF3275 family protein | - |
| CSC29_RS24240 () | 4935571..4935846 | + | 276 | WP_003117060.1 | hypothetical protein | - |
| CSC29_RS24245 () | 4935916..4936278 | + | 363 | WP_003117061.1 | hypothetical protein | - |
| CSC29_RS24250 () | 4936346..4936600 | + | 255 | WP_003117062.1 | hypothetical protein | - |
| CSC29_RS24255 () | 4936693..4937298 | + | 606 | WP_003158169.1 | hypothetical protein | - |
| CSC29_RS24260 () | 4937328..4938773 | + | 1446 | WP_003158168.1 | class I SAM-dependent methyltransferase | - |
| CSC29_RS24265 () | 4938879..4939040 | + | 162 | Protein_4704 | helicase | - |
| CSC29_RS24270 () | 4939066..4939496 | - | 431 | Protein_4705 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CSC29_RS24275 () | 4939601..4940284 | + | 684 | WP_003158165.1 | SOS response-associated peptidase family protein | - |
| CSC29_RS24290 () | 4941148..4941522 | + | 375 | WP_003158163.1 | hypothetical protein | - |
| CSC29_RS35755 () | 4941547..4942131 | + | 585 | WP_044265603.1 | hypothetical protein | - |
| CSC29_RS24300 () | 4942116..4942712 | + | 597 | WP_003158161.1 | VWA domain-containing protein | - |
| CSC29_RS24310 () | 4943264..4943656 | + | 393 | WP_003158160.1 | hypothetical protein | - |
| CSC29_RS24315 () | 4943675..4943998 | + | 324 | WP_003158159.1 | hypothetical protein | - |
| CSC29_RS24320 () | 4944825..4945097 | - | 273 | WP_023464341.1 | hypothetical protein | - |
| CSC29_RS24325 () | 4945315..4946013 | + | 699 | WP_023094353.1 | hypothetical protein | - |
| CSC29_RS24330 () | 4946024..4946779 | + | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| CSC29_RS24335 () | 4946764..4947345 | + | 582 | WP_003117072.1 | hypothetical protein | VF |
| CSC29_RS24340 () | 4947342..4947842 | + | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| CSC29_RS24345 () | 4947914..4948120 | + | 207 | WP_073689213.1 | hypothetical protein | - |
| CSC29_RS24350 () | 4948124..4950355 | + | 2232 | WP_003099821.1 | type IV conjugative transfer system coupling protein TraD | - |
| CSC29_RS24355 () | 4950355..4951101 | + | 747 | WP_003099824.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| CSC29_RS24360 () | 4951119..4951610 | + | 492 | WP_003099826.1 | hypothetical protein | - |
| CSC29_RS24365 () | 4951852..4953333 | + | 1482 | WP_003117073.1 | UvrD-helicase domain-containing protein | - |
| CSC29_RS35760 () | 4953465..4954574 | + | 1110 | WP_003121016.1 | hypothetical protein | - |
| CSC29_RS24375 () | 4954620..4954931 | - | 312 | WP_003117074.1 | DUF2845 domain-containing protein | - |
| CSC29_RS24380 () | 4955199..4958165 | - | 2967 | WP_011005944.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| CSC29_RS24385 () | 4958169..4958729 | - | 561 | WP_014003957.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| CSC29_RS24390 () | 4958732..4959196 | - | 465 | WP_016851620.1 | hypothetical protein | - |
| CSC29_RS24395 () | 4959637..4960203 | - | 567 | WP_004574805.1 | OsmC family protein | - |
| CSC29_RS24400 () | 4960218..4960994 | - | 777 | WP_004574804.1 | 3-alpha-hydroxycholanate dehydrogenase (NADP(+)) | VF |
| CSC29_RS24405 () | 4961054..4961638 | - | 585 | WP_004574803.1 | Biofilm operon icaADBC HTH-type negative transcriptional regulator IcaR | VF |
| CSC29_RS24410 () | 4961635..4962315 | - | 681 | WP_004574802.1 | cupin domain-containing protein | - |
| CSC29_RS24415 () | 4962454..4962723 | + | 270 | WP_025986390.1 | hypothetical protein | - |
| CSC29_RS24420 () | 4962817..4963155 | + | 339 | WP_003158157.1 | RAQPRD family integrative conjugative element protein | - |
| CSC29_RS24425 () | 4963152..4963391 | + | 240 | WP_003121019.1 | TIGR03758 family integrating conjugative element protein | - |
| CSC29_RS24430 () | 4963409..4963765 | + | 357 | WP_003117077.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| CSC29_RS24435 () | 4963776..4964162 | + | 387 | WP_003117078.1 | TIGR03750 family conjugal transfer protein | - |
| CSC29_RS24440 () | 4964159..4964818 | + | 660 | WP_003117079.1 | TIGR03746 family integrating conjugative element protein | - |
| CSC29_RS24445 () | 4964815..4965699 | + | 885 | WP_003121020.1 | TIGR03749 family integrating conjugative element protein | - |
| CSC29_RS24450 () | 4965683..4967188 | + | 1506 | WP_003121021.1 | TIGR03752 family integrating conjugative element protein | - |
| CSC29_RS24455 () | 4967166..4967609 | + | 444 | WP_003121022.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| CSC29_RS24460 () | 4967609..4970551 | + | 2943 | WP_031299041.1 | conjugative transfer ATPase | - |
| CSC29_RS24465 () | 4970548..4970832 | + | 285 | WP_003099860.1 | hypothetical protein | - |
| CSC29_RS24470 () | 4970829..4971488 | + | 660 | WP_003109405.1 | DsbA family protein | - |
| CSC29_RS24475 () | 4971485..4971703 | - | 219 | WP_003109406.1 | hypothetical protein | - |
| CSC29_RS24480 () | 4972521..4973144 | - | 624 | WP_023083226.1 | hypothetical protein | - |
| CSC29_RS24490 () | 4973845..4974276 | + | 432 | WP_003111736.1 | TIGR03757 family integrating conjugative element protein | - |
| CSC29_RS24495 () | 4974276..4975214 | + | 939 | WP_016851627.1 | TIGR03756 family integrating conjugative element protein | - |
| CSC29_RS24500 () | 4975232..4976614 | + | 1383 | WP_023122674.1 | integrating conjugative element protein | - |
| CSC29_RS24505 () | 4976614..4976961 | + | 348 | WP_016851629.1 | hypothetical protein | - |
| CSC29_RS24510 () | 4976958..4978472 | + | 1515 | WP_016851630.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| CSC29_RS35765 () | 4978498..4978821 | - | 324 | WP_071536355.1 | hypothetical protein | - |
| CSC29_RS24515 () | 4978940..4979212 | + | 273 | WP_003111730.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| CSC29_RS24520 () | 4979216..4979569 | + | 354 | WP_003111729.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CSC29_RS24525 () | 4979596..4980510 | - | 915 | WP_003119431.1 | hypothetical protein | - |
| CSC29_RS24530 () | 4980536..4980775 | - | 240 | WP_010792230.1 | hypothetical protein | - |
| CSC29_RS24540 () | 4982458..4984377 | + | 1920 | WP_016852953.1 | helicase/relaxase domain-containing protein | - |
| CSC29_RS24545 () | 4984374..4985654 | + | 1281 | WP_016852952.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CSC29_RS24565 () | 4986507..4989071 | - | 2565 | WP_023465252.1 | ATP-dependent chaperone ClpB | - |
| CSC29_RS24570 () | 4989227..4989955 | - | 729 | WP_003102588.1 | peptidoglycan editing factor PgeF | - |
| CSC29_RS24575 () | 4989952..4990914 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|