MGE detailed information
MGE type: Genomic_island MGE length: 52438 bp
Accession: NZ_CP029090 Location: 1651070..1703507 Organism: Pseudomonas aeruginosa strain AR442 Replicon: chromosome
Accession: NZ_CP029090 Location: 1651070..1703507 Organism: Pseudomonas aeruginosa strain AR442 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC29_RS08205 () | 1646255..1646611 | + | 357 | WP_003099086.1 | 50S ribosomal protein L20 | - |
| CSC29_RS08210 () | 1646709..1647725 | + | 1017 | WP_003090666.1 | phenylalanine--tRNA ligase subunit alpha | - |
| CSC29_RS08215 () | 1647760..1650138 | + | 2379 | WP_023464845.1 | phenylalanine--tRNA ligase subunit beta | - |
| CSC29_RS08220 () | 1650142..1650444 | + | 303 | WP_003090661.1 | integration host factor subunit alpha | - |
| CSC29_RS08225 () | 1650425..1650781 | + | 357 | WP_003090655.1 | MerR family transcriptional regulator | - |
| CSC29_RS08235 () | 1651070..1651912 | - | 843 | WP_023464844.1 | hypothetical protein | - |
| CSC29_RS08240 () | 1652517..1652771 | + | 255 | WP_023464843.1 | AlpA family transcriptional regulator | - |
| CSC29_RS08245 () | 1653098..1654066 | + | 969 | WP_028699792.1 | inovirus-type Gp2 protein | - |
| CSC29_RS08250 () | 1654578..1655198 | - | 621 | WP_010487132.1 | glutathione S-transferase | - |
| CSC29_RS08255 () | 1655589..1656182 | + | 594 | WP_010953412.1 | TetR/AcrR family transcriptional regulator | - |
| CSC29_RS08260 () | 1656295..1657329 | + | 1035 | WP_010953413.1 | NADP-dependent oxidoreductase | - |
| CSC29_RS08265 () | 1657450..1657692 | + | 243 | WP_004574300.1 | hypothetical protein | - |
| CSC29_RS08270 () | 1657792..1658253 | + | 462 | WP_010953414.1 | (2Fe-2S)-binding protein | - |
| CSC29_RS08275 () | 1658255..1660447 | + | 2193 | WP_010953415.1 | xanthine dehydrogenase family protein molybdopterin-binding subunit | - |
| CSC29_RS08280 () | 1660458..1661678 | + | 1221 | WP_023464840.1 | cytochrome c | - |
| CSC29_RS08285 () | 1661692..1662900 | + | 1209 | WP_023464839.1 | XdhC family protein | - |
| CSC29_RS08290 () | 1662929..1663267 | + | 339 | WP_004574290.1 | antibiotic biosynthesis monooxygenase | - |
| CSC29_RS08295 () | 1663264..1664232 | + | 969 | WP_023464838.1 | radical SAM protein | - |
| CSC29_RS08300 () | 1664210..1664809 | - | 600 | WP_023464837.1 | nucleotidyltransferase family protein | - |
| CSC29_RS08305 () | 1665092..1665397 | - | 306 | WP_010953420.1 | ArsR family transcriptional regulator | - |
| CSC29_RS08310 () | 1665536..1666519 | - | 984 | WP_010953421.1 | LLM class oxidoreductase | - |
| CSC29_RS08315 () | 1666586..1667710 | - | 1125 | WP_010953422.1 | alkene reductase | - |
| CSC29_RS08320 () | 1667773..1669272 | - | 1500 | WP_023464836.1 | aldehyde dehydrogenase family protein | - |
| CSC29_RS08325 () | 1669524..1670915 | - | 1392 | WP_010487163.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| CSC29_RS08330 () | 1671026..1672126 | - | 1101 | WP_010953424.1 | NADH:flavin oxidoreductase/NADH oxidase | - |
| CSC29_RS08335 () | 1672493..1673317 | - | 825 | WP_010953425.1 | NADPH-dependent oxidoreductase | - |
| CSC29_RS08340 () | 1673387..1673689 | - | 303 | WP_010487168.1 | DUF1330 domain-containing protein | - |
| CSC29_RS08345 () | 1673699..1674376 | - | 678 | WP_010953426.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| CSC29_RS08350 () | 1674459..1675616 | - | 1158 | WP_010953427.1 | iron-containing alcohol dehydrogenase | - |
| CSC29_RS08355 () | 1676057..1676416 | - | 360 | Protein_1623 | DNA repair protein RadC | - |
| CSC29_RS08360 () | 1676388..1677338 | - | 951 | WP_031299400.1 | hypothetical protein | - |
| CSC29_RS08365 () | 1677431..1678435 | - | 1005 | WP_010953429.1 | YqaJ viral recombinase family protein | - |
| CSC29_RS08370 () | 1678515..1679483 | - | 969 | WP_031299399.1 | DUF932 domain-containing protein | - |
| CSC29_RS08375 () | 1679581..1679853 | - | 273 | WP_031299398.1 | hypothetical protein | - |
| CSC29_RS08380 () | 1680115..1680360 | + | 246 | WP_010953432.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| CSC29_RS08385 () | 1680485..1680757 | + | 273 | WP_010953433.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| CSC29_RS08390 () | 1680745..1681038 | + | 294 | WP_010953434.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CSC29_RS08395 () | 1681032..1682441 | - | 1410 | WP_010953435.1 | Prophage integrase IntA ; Integrase | Integrase |
| CSC29_RS08400 () | 1682879..1685659 | + | 2781 | WP_023464835.1 | DEAD/DEAH box helicase family protein | - |
| CSC29_RS08405 () | 1685656..1687437 | + | 1782 | WP_023464834.1 | restriction endonuclease subunit S | - |
| CSC29_RS08410 () | 1687440..1689170 | + | 1731 | WP_023464833.1 | AAA family ATPase | - |
| CSC29_RS35565 () | 1689167..1689979 | + | 813 | WP_124075259.1 | hypothetical protein | - |
| CSC29_RS08420 () | 1689981..1691501 | + | 1521 | WP_023464831.1 | type I restriction-modification system subunit M | - |
| CSC29_RS08425 () | 1691519..1692511 | + | 993 | WP_031299396.1 | restriction endonuclease | - |
| CSC29_RS08430 () | 1692526..1692723 | + | 198 | WP_031301190.1 | AlpA family transcriptional regulator | - |
| CSC29_RS08435 () | 1692837..1697966 | + | 5130 | WP_023464828.1 | RecQ family ATP-dependent DNA helicase | - |
| CSC29_RS08440 () | 1698127..1698514 | + | 388 | Protein_1640 | hypothetical protein | - |
| CSC29_RS08445 () | 1698565..1700268 | - | 1704 | WP_023464826.1 | 50S ribosome-binding GTPase | - |
| CSC29_RS08450 () | 1700268..1703507 | - | 3240 | WP_023835792.1 | DUF726 domain-containing protein | - |
| CSC29_RS08460 () | 1703911..1704915 | - | 1005 | WP_031636417.1 | WYL domain-containing protein | - |
| CSC29_RS08465 () | 1704989..1707889 | - | 2901 | WP_023835778.1 | filamentous hemagglutinin N-terminal domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|