MGE detailed information
MGE type: Prophage MGE length: 53519 bp
Accession: NZ_CP029087 Location: 2131932..2185450 Organism: Staphylococcus aureus strain AR461 Replicon: chromosome
Accession: NZ_CP029087 Location: 2131932..2185450 Organism: Staphylococcus aureus strain AR461 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC47_RS11135 () | 2128436..2128726 | - | 291 | WP_000671712.1 | MAP domain-containing protein | - |
| CSC47_RS11140 () | 2128741..2130171 | - | 1431 | WP_001557458.1 | extracellular adherence protein Eap/Map | - |
| CSC47_RS11145 () | 2130557..2130807 | + | 251 | Protein_2057 | sphingomyelin phosphodiesterase | - |
| CSC47_RS11150 () | 2131129..2131308 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| CSC47_RS11160 () | 2131619..2131879 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| CSC47_RS11165 () | 2131932..2132282 | - | 351 | WP_000702263.1 | hypothetical protein | VF |
| CSC47_RS11170 () | 2132967..2133416 | + | 450 | WP_000727649.1 | hypothetical protein | VF |
| CSC47_RS11175 () | 2133511..2133846 | - | 336 | Protein_2062 | SH3 domain-containing protein | - |
| CSC47_RS11190 () | 2134495..2134986 | - | 492 | WP_000919350.1 | hypothetical protein | VF |
| CSC47_RS11195 () | 2135177..2135932 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| CSC47_RS11200 () | 2135944..2136198 | - | 255 | WP_000611512.1 | phage holin | - |
| CSC47_RS11205 () | 2136250..2136357 | + | 108 | WP_001791821.1 | hypothetical protein | - |
| - () | 2136279..2136418 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2136279..2136418 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2136279..2136418 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2136279..2136418 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2136287..2136342 | + | 56 | - | - | Antitoxin Detail |
| CSC47_RS11210 () | 2136410..2136586 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| CSC47_RS11215 () | 2136736..2137032 | - | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| CSC47_RS11220 () | 2137090..2137377 | - | 288 | WP_001040261.1 | hypothetical protein | - |
| CSC47_RS11225 () | 2137424..2137576 | - | 153 | WP_001153681.1 | hypothetical protein | - |
| CSC47_RS11230 () | 2137566..2141351 | - | 3786 | WP_000582154.1 | hypothetical protein | - |
| CSC47_RS11235 () | 2141367..2142851 | - | 1485 | WP_000567396.1 | phage tail family protein | - |
| CSC47_RS11240 () | 2142848..2147380 | - | 4533 | WP_001557459.1 | phage tail tape measure protein | - |
| CSC47_RS15410 () | 2147437..2147574 | - | 138 | WP_001549167.1 | hypothetical protein | - |
| CSC47_RS11245 () | 2147625..2147975 | - | 351 | WP_001096355.1 | hypothetical protein | - |
| CSC47_RS11250 () | 2148025..2148249 | - | 225 | WP_071621395.1 | Ig-like domain-containing protein | - |
| CSC47_RS11255 () | 2148291..2148935 | - | 645 | WP_000985142.1 | phage tail protein | - |
| CSC47_RS11260 () | 2148936..2149343 | - | 408 | WP_000565498.1 | hypothetical protein | - |
| CSC47_RS11265 () | 2149340..2149744 | - | 405 | WP_000114341.1 | HK97 gp10 family phage protein | - |
| CSC47_RS11270 () | 2149741..2150103 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| CSC47_RS11275 () | 2150087..2150371 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| CSC47_RS11280 () | 2150361..2150645 | - | 285 | WP_000238241.1 | hypothetical protein | - |
| CSC47_RS11285 () | 2150665..2151810 | - | 1146 | WP_000154565.1 | phage major capsid protein | - |
| CSC47_RS11290 () | 2151833..2152570 | - | 738 | WP_000861911.1 | Clp protease ClpP | - |
| CSC47_RS11295 () | 2152554..2153717 | - | 1164 | WP_000025268.1 | phage portal protein | - |
| CSC47_RS11300 () | 2153733..2155394 | - | 1662 | WP_000625096.1 | terminase large subunit | - |
| CSC47_RS11305 () | 2155391..2155735 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| CSC47_RS11310 () | 2155866..2156165 | - | 300 | WP_000988332.1 | HNH endonuclease | - |
| CSC47_RS11315 () | 2156397..2156813 | - | 417 | WP_000590122.1 | hypothetical protein | - |
| CSC47_RS11320 () | 2156841..2157041 | - | 201 | WP_001557462.1 | DUF1514 family protein | - |
| CSC47_RS11325 () | 2157041..2157190 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| CSC47_RS11330 () | 2157187..2157393 | - | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
| CSC47_RS11335 () | 2157390..2157635 | - | 246 | WP_001282077.1 | hypothetical protein | - |
| CSC47_RS11340 () | 2157672..2158208 | - | 537 | WP_000185693.1 | dUTPase | - |
| CSC47_RS11345 () | 2158205..2158450 | - | 246 | WP_001065108.1 | DUF1024 family protein | - |
| CSC47_RS11350 () | 2158465..2158713 | - | 249 | WP_000178987.1 | hypothetical protein | - |
| CSC47_RS11355 () | 2158710..2158967 | - | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| CSC47_RS11360 () | 2158967..2159338 | - | 372 | WP_000101279.1 | hypothetical protein | - |
| CSC47_RS11365 () | 2159351..2159755 | - | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CSC47_RS11370 () | 2159764..2159982 | - | 219 | WP_000338528.1 | hypothetical protein | - |
| CSC47_RS11375 () | 2159989..2160882 | - | 894 | WP_000148333.1 | DnaD domain-containing protein | - |
| CSC47_RS11380 () | 2160912..2161382 | - | 471 | WP_000934759.1 | single-stranded DNA-binding protein | - |
| CSC47_RS11385 () | 2161383..2162000 | - | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| CSC47_RS11390 () | 2162081..2163001 | - | 921 | WP_000180600.1 | recombinase RecT | - |
| CSC47_RS11395 () | 2163003..2164946 | - | 1944 | WP_000700554.1 | AAA family ATPase | - |
| CSC47_RS11400 () | 2164955..2165218 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| CSC47_RS11405 () | 2165227..2165487 | - | 261 | WP_000291510.1 | DUF1108 family protein | - |
| CSC47_RS11410 () | 2165492..2165794 | - | 303 | WP_000165371.1 | DUF2482 family protein | - |
| CSC47_RS11415 () | 2165889..2166050 | - | 162 | WP_000048129.1 | DUF1270 family protein | - |
| CSC47_RS11420 () | 2166047..2166370 | - | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| CSC47_RS11425 () | 2166425..2166805 | + | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| CSC47_RS11430 () | 2166792..2166989 | - | 198 | WP_001148862.1 | hypothetical protein | - |
| CSC47_RS11435 () | 2167005..2167754 | - | 750 | WP_001148338.1 | phage antirepressor KilAC domain-containing protein | - |
| CSC47_RS11440 () | 2167811..2168020 | + | 210 | WP_000772137.1 | hypothetical protein | - |
| CSC47_RS11445 () | 2168013..2168153 | - | 141 | WP_000939495.1 | hypothetical protein | - |
| CSC47_RS11450 () | 2168168..2168611 | - | 444 | WP_000435360.1 | hypothetical protein | - |
| CSC47_RS11455 () | 2168624..2168866 | - | 243 | WP_000639923.1 | DUF739 family protein | - |
| CSC47_RS11460 () | 2169030..2169746 | + | 717 | WP_001083975.1 | LexA family transcriptional regulator | - |
| CSC47_RS11465 () | 2169758..2170612 | + | 855 | WP_001557601.1 | HIRAN domain-containing protein | - |
| CSC47_RS15415 () | 2170686..2170832 | + | 147 | WP_000345949.1 | hypothetical protein | - |
| CSC47_RS11470 () | 2170829..2171014 | + | 186 | WP_000109189.1 | hypothetical protein | - |
| CSC47_RS11475 () | 2171085..2171267 | + | 183 | WP_000705245.1 | hypothetical protein | - |
| CSC47_RS11480 () | 2171346..2172059 | + | 714 | WP_001549185.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| CSC47_RS11485 () | 2172250..2173287 | + | 1038 | WP_000857200.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CSC47_RS11490 () | 2173338..2174168 | + | 831 | Protein_2125 | hypothetical protein | VF |
| CSC47_RS11495 () | 2174406..2175422 | - | 1017 | WP_000595392.1 | hypothetical protein | VF |
| CSC47_RS11500 () | 2175444..2176499 | - | 1056 | WP_000791411.1 | hypothetical protein | VF |
| CSC47_RS11505 () | 2176935..2178158 | + | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| CSC47_RS11510 () | 2178602..2179909 | + | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| CSC47_RS11520 () | 2180449..2182065 | - | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| CSC47_RS11525 () | 2182141..2182425 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| CSC47_RS11530 () | 2182600..2183343 | + | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease | - |
| CSC47_RS11535 () | 2183368..2184627 | - | 1260 | WP_001558038.1 | hypothetical protein | VF |
| CSC47_RS11540 () | 2184824..2185450 | + | 627 | WP_000522381.1 | nitroreductase family protein | - |
| CSC47_RS11545 () | 2185811..2186596 | + | 786 | WP_000867951.1 | carbon-nitrogen family hydrolase | - |
| CSC47_RS11550 () | 2187196..2187330 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
| CSC47_RS11555 () | 2187566..2188129 | + | 564 | WP_001105696.1 | accessory gene regulator ArgB-like protein | - |
| CSC47_RS11560 () | 2188132..2188275 | + | 144 | WP_001094921.1 | cyclic lactone autoinducer peptide | - |
| CSC47_RS11565 () | 2188305..2189588 | + | 1284 | WP_000447888.1 | sensor histidine kinase | - |
| CSC47_RS11570 () | 2189607..2190323 | + | 717 | WP_000688492.1 | LytTR family DNA-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|