MGE detailed information
MGE type: Prophage MGE length: 74060 bp
Accession: NZ_CP029087 Location: 1976478..2050537 Organism: Staphylococcus aureus strain AR461 Replicon: chromosome
Accession: NZ_CP029087 Location: 1976478..2050537 Organism: Staphylococcus aureus strain AR461 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC47_RS10120 () | 1972291..1973037 | - | 747 | WP_108711088.1 | S9 family peptidase | - |
| CSC47_RS10125 () | 1973042..1973515 | - | 474 | WP_000672013.1 | nucleoside triphosphatase YtkD | - |
| CSC47_RS10130 () | 1973581..1973838 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| CSC47_RS10135 () | 1973835..1974836 | - | 1002 | WP_000778528.1 | o-succinylbenzoate synthase | - |
| CSC47_RS10140 () | 1974841..1976319 | - | 1479 | WP_000348364.1 | o-succinylbenzoate--CoA ligase | - |
| CSC47_RS10145 () | 1976478..1976933 | - | 456 | WP_012840523.1 | DUF4909 domain-containing protein | - |
| CSC47_RS10150 () | 1977236..1977886 | + | 651 | WP_001795210.1 | excalibur calcium-binding domain-containing protein | - |
| CSC47_RS10155 () | 1977967..1978962 | + | 996 | WP_000070642.1 | DUF4352 domain-containing protein | - |
| CSC47_RS10160 () | 1979037..1979663 | + | 627 | WP_000669024.1 | hypothetical protein | - |
| CSC47_RS10165 () | 1979704..1980045 | + | 342 | WP_000627540.1 | DUF3969 family protein | - |
| CSC47_RS10170 () | 1980146..1980718 | + | 573 | WP_000414216.1 | hypothetical protein | - |
| CSC47_RS10175 () | 1980916..1981928 | - | 1013 | Protein_1908 | IS3 family transposase ISClsp1 | Transposase |
| CSC47_RS10180 () | 1982073..1982168 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| CSC47_RS10185 () | 1982291..1982392 | + | 102 | WP_001792025.1 | hypothetical protein | - |
| CSC47_RS10190 () | 1982370..1982531 | - | 162 | Protein_1911 | transposase | - |
| CSC47_RS10195 () | 1982522..1983016 | - | 495 | Protein_1912 | IS21 family transposase IS232 | Transposase |
| CSC47_RS10200 () | 1983468..1984697 | - | 1230 | WP_000072627.1 | restriction endonuclease subunit S | - |
| CSC47_RS10205 () | 1984690..1986246 | - | 1557 | WP_000028669.1 | type I restriction-modification system subunit M | - |
| CSC47_RS10210 () | 1986410..1986544 | - | 135 | WP_001791797.1 | hypothetical protein | - |
| CSC47_RS10215 () | 1986607..1987326 | - | 720 | WP_001038752.1 | hypothetical protein | VF |
| CSC47_RS10220 () | 1987428..1987535 | + | 108 | WP_011447030.1 | hypothetical protein | - |
| CSC47_RS10225 () | 1987484..1988203 | - | 720 | WP_001038704.1 | hypothetical protein | VF |
| CSC47_RS10230 () | 1988324..1989043 | - | 720 | WP_001038872.1 | hypothetical protein | VF |
| CSC47_RS10235 () | 1989101..1989823 | - | 723 | WP_001039454.1 | hypothetical protein | VF |
| CSC47_RS10240 () | 1989948..1990655 | - | 708 | WP_001039427.1 | hypothetical protein | VF |
| CSC47_RS10250 () | 1991619..1992200 | + | 582 | WP_001092780.1 | DUF4888 domain-containing protein | - |
| CSC47_RS10255 () | 1992673..1992961 | - | 289 | Protein_1923 | BsaG protein | - |
| CSC47_RS10260 () | 1993147..1993620 | + | 474 | WP_000550252.1 | hypothetical protein | - |
| CSC47_RS10265 () | 1993625..1994416 | + | 792 | WP_000543854.1 | DUF1828 domain-containing protein | - |
| CSC47_RS10270 () | 1994786..1995769 | - | 984 | WP_000782463.1 | hypothetical protein | VF |
| CSC47_RS10275 () | 1995771..1996706 | - | 936 | WP_000473596.1 | hypothetical protein | VF |
| CSC47_RS15405 () | 1997602..1998033 | + | 432 | Protein_1928 | hypothetical protein | - |
| CSC47_RS10280 () | 1998070..1998858 | + | 789 | WP_000206343.1 | DUF1828 domain-containing protein | - |
| CSC47_RS10285 () | 1999692..2000186 | + | 495 | WP_001253432.1 | hypothetical protein | - |
| CSC47_RS10290 () | 2000264..2000500 | + | 237 | WP_000617704.1 | hypothetical protein | - |
| CSC47_RS10295 () | 2000521..2001297 | + | 777 | WP_000848318.1 | DUF1828 domain-containing protein | - |
| CSC47_RS10305 () | 2001849..2002625 | - | 777 | WP_000736712.1 | hypothetical protein | VF |
| CSC47_RS10310 () | 2002908..2003663 | - | 756 | WP_001236362.1 | hypothetical protein | VF |
| CSC47_RS15350 () | 2003702..2004473 | - | 772 | Protein_1935 | hypothetical protein | VF |
| CSC47_RS10325 () | 2004627..2005355 | - | 729 | WP_000713847.1 | hypothetical protein | VF |
| CSC47_RS10330 () | 2005390..2006109 | - | 720 | WP_000821658.1 | hypothetical protein | VF |
| CSC47_RS10335 () | 2006390..2007172 | - | 783 | WP_010922839.1 | hypothetical protein | VF |
| CSC47_RS10380 () | 2008532..2009086 | - | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
| CSC47_RS10390 () | 2009409..2010809 | - | 1401 | WP_000167542.1 | protoporphyrinogen oxidase | - |
| CSC47_RS10395 () | 2010833..2011756 | - | 924 | WP_000162881.1 | ferrochelatase | - |
| CSC47_RS10400 () | 2011814..2012851 | - | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| CSC47_RS10405 () | 2012841..2012951 | - | 111 | WP_001790154.1 | hypothetical protein | - |
| CSC47_RS10410 () | 2013114..2013617 | + | 504 | WP_000737975.1 | signal transduction protein TRAP | - |
| CSC47_RS10415 () | 2013741..2014964 | - | 1224 | WP_000551836.1 | ABC transporter permease | - |
| CSC47_RS10420 () | 2014957..2015697 | - | 741 | WP_000216874.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| CSC47_RS10425 () | 2015831..2016253 | + | 423 | WP_000004981.1 | HIT family protein | - |
| CSC47_RS10430 () | 2016395..2016760 | + | 366 | WP_000648118.1 | YtxH domain-containing protein | - |
| CSC47_RS10435 () | 2017495..2018052 | + | 558 | WP_000477959.1 | DUF3267 domain-containing protein | - |
| CSC47_RS10440 () | 2018257..2019219 | + | 963 | WP_000782121.1 | Foldase protein PrsA | VF |
| CSC47_RS10445 () | 2019340..2020281 | - | 942 | WP_001244175.1 | 3'-5' exoribonuclease YhaM | - |
| CSC47_RS10450 () | 2020278..2023214 | - | 2937 | WP_000584630.1 | AAA family ATPase | - |
| CSC47_RS10455 () | 2023204..2024400 | - | 1197 | WP_000238227.1 | exonuclease SbcCD subunit D | - |
| CSC47_RS10460 () | 2024691..2024789 | - | 99 | WP_001802255.1 | hypothetical protein | - |
| CSC47_RS10470 () | 2025328..2025672 | - | 345 | WP_000290301.1 | YlbF/YmcA family competence regulator | - |
| CSC47_RS10475 () | 2025741..2026865 | - | 1125 | WP_000992518.1 | DUF445 domain-containing protein | - |
| CSC47_RS10480 () | 2027044..2027508 | - | 465 | WP_000375864.1 | helix-turn-helix transcriptional regulator | - |
| CSC47_RS10485 () | 2027864..2028487 | - | 624 | WP_001045135.1 | Transcriptional regulatory protein RcsB | VF |
| CSC47_RS10490 () | 2028509..2029621 | - | 1113 | WP_000437969.1 | GAF domain-containing sensor histidine kinase | - |
| CSC47_RS10495 () | 2029784..2030605 | + | 822 | WP_000669376.1 | RluA family pseudouridine synthase | - |
| CSC47_RS10500 () | 2031058..2032443 | - | 1386 | WP_000116228.1 | class II fumarate hydratase | - |
| CSC47_RS10505 () | 2032639..2033034 | - | 396 | WP_000901023.1 | hypothetical protein | - |
| CSC47_RS10510 () | 2033582..2033734 | - | 153 | WP_000031108.1 | hypothetical protein | Toxin Detail |
| CSC47_RS10515 () | 2033759..2034358 | - | 600 | WP_001251224.1 | glucosamine-6-phosphate isomerase | Antitoxin Detail |
| CSC47_RS10520 () | 2034517..2034987 | - | 471 | WP_000181395.1 | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | - |
| CSC47_RS10525 () | 2034992..2036119 | - | 1128 | WP_000379980.1 | tRNA epoxyqueuosine(34) reductase QueG | - |
| CSC47_RS10530 () | 2036270..2036992 | - | 723 | WP_000590809.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| CSC47_RS10535 () | 2036985..2038442 | - | 1458 | WP_000649908.1 | ABC transporter permease subunit | - |
| CSC47_RS10540 () | 2038700..2039761 | - | 1062 | WP_000063582.1 | PTS transporter subunit IIC | - |
| CSC47_RS10545 () | 2040345..2041664 | + | 1320 | WP_001557163.1 | ISL3 family transposase IS1181 | Transposase |
| CSC47_RS10700 () | 2050091..2050537 | - | 447 | WP_000110007.1 | peroxide-responsive transcriptional repressor PerR | - |
| CSC47_RS10705 () | 2050634..2051584 | - | 951 | WP_000869447.1 | phosphoglycerate dehydrogenase | - |
| CSC47_RS10710 () | 2051590..2052045 | - | 456 | WP_000939528.1 | thioredoxin-dependent thiol peroxidase | - |
| CSC47_RS10715 () | 2052126..2053415 | + | 1290 | WP_001011595.1 | glutamate-1-semialdehyde 2,1-aminomutase | - |
| CSC47_RS10720 () | 2053708..2054802 | + | 1095 | WP_001236371.1 | aromatic acid exporter family protein | - |
| CSC47_RS10725 () | 2054892..2054983 | - | 92 | Protein_1976 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|