MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 74712 bp
Accession: NZ_CP028943 Location: 2502150..2576861 Organism: Vibrio sp. dhg Replicon: chromosome
Accession: NZ_CP028943 Location: 2502150..2576861 Organism: Vibrio sp. dhg Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DBX26_RS11510 () | 2498460..2501093 | - | 2634 | WP_118119221.1 | UDP-forming cellulose synthase catalytic subunit | - |
| DBX26_RS11515 () | 2501097..2501876 | - | 780 | WP_097371336.1 | cellulose synthase operon protein YhjQ | - |
| DBX26_RS11520 () | 2501873..2502070 | - | 198 | WP_025499879.1 | hypothetical protein | - |
| DBX26_RS11525 () | 2502150..2503178 | - | 1029 | Protein_2204 | IS630 family transposase ISVch6 | Transposase |
| DBX26_RS11535 () | 2503468..2504259 | + | 792 | Protein_2205 | IS4 family transposase IS10R | Transposase |
| DBX26_RS11550 () | 2506469..2507992 | + | 1524 | WP_118119225.1 | group II intron reverse transcriptase/maturase | - |
| DBX26_RS11555 () | 2508061..2508534 | + | 474 | Protein_2208 | IS3 family transposase ISVpa4 | Transposase |
| DBX26_RS11560 () | 2508849..2510432 | + | 1584 | WP_118119227.1 | cellulose biosynthesis protein BcsE | - |
| DBX26_RS25470 () | 2510429..2510605 | + | 177 | WP_020840228.1 | hypothetical protein | - |
| DBX26_RS11565 () | 2510605..2512230 | + | 1626 | WP_118119229.1 | cellulose biosynthesis protein BcsG | - |
| DBX26_RS11570 () | 2512504..2512878 | + | 375 | WP_020433901.1 | hypothetical protein | - |
| DBX26_RS11575 () | 2512875..2513201 | + | 327 | WP_102969848.1 | IS66 family transposase ISBj7_B | Transposase |
| DBX26_RS11580 () | 2513317..2514915 | + | 1599 | WP_118119231.1 | IS66 family transposase | - |
| DBX26_RS11585 () | 2514988..2515320 | + | 333 | Protein_2215 | SPFH/Band 7/PHB domain protein | - |
| DBX26_RS11590 () | 2515350..2516755 | - | 1406 | Protein_2216 | IS66 family transposase ISAs21 | Transposase |
| DBX26_RS11595 () | 2516883..2518046 | + | 1164 | WP_162889695.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| DBX26_RS11600 () | 2518597..2519853 | - | 1257 | WP_005391618.1 | glucose-1-phosphate adenylyltransferase | - |
| DBX26_RS11605 () | 2520171..2520878 | - | 708 | WP_005398010.1 | hypothetical protein | - |
| DBX26_RS11610 () | 2520967..2522040 | - | 1074 | WP_104975175.1 | toprim domain-containing protein | - |
| DBX26_RS11615 () | 2522132..2522473 | - | 342 | WP_104975174.1 | plasmid-related protein | - |
| DBX26_RS11620 () | 2522473..2522970 | - | 498 | WP_000797298.1 | DNA repair protein RadC | - |
| DBX26_RS11625 () | 2523055..2524710 | - | 1656 | WP_118119235.1 | VWA domain-containing protein | - |
| DBX26_RS11630 () | 2524780..2525220 | - | 441 | WP_007104987.1 | hypothetical protein | - |
| DBX26_RS11635 () | 2525282..2526235 | - | 954 | WP_118119237.1 | DUF3150 domain-containing protein | - |
| DBX26_RS11640 () | 2526334..2527101 | - | 768 | WP_118119239.1 | hypothetical protein | - |
| DBX26_RS11645 () | 2527101..2528060 | - | 960 | WP_103201369.1 | CbbQ/NirQ/NorQ C-terminal domain-containing protein | - |
| DBX26_RS11650 () | 2528270..2529286 | - | 1017 | WP_004249381.1 | YqaJ viral recombinase family protein | - |
| DBX26_RS25475 () | 2529347..2529490 | - | 144 | WP_015066581.1 | hypothetical protein | - |
| DBX26_RS11655 () | 2529573..2530391 | - | 819 | WP_103201370.1 | phage recombination protein Bet | - |
| DBX26_RS11660 () | 2530471..2530890 | - | 420 | WP_012368368.1 | single-stranded DNA-binding protein | - |
| DBX26_RS11665 () | 2530906..2531232 | - | 327 | WP_103201371.1 | plasmid-related protein | - |
| DBX26_RS11670 () | 2531600..2532202 | + | 603 | WP_103201372.1 | hypothetical protein | - |
| DBX26_RS25480 () | 2532386..2532559 | - | 174 | WP_162889696.1 | hypothetical protein | - |
| DBX26_RS11675 () | 2532570..2532746 | - | 177 | Protein_2235 | M48 family metallopeptidase | - |
| DBX26_RS11680 () | 2532736..2533202 | - | 467 | Protein_2236 | cytochrome c | - |
| DBX26_RS11685 () | 2533231..2533941 | - | 711 | WP_004393997.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| DBX26_RS11690 () | 2533943..2535148 | - | 1206 | WP_004393995.1 | ABC transporter permease | - |
| DBX26_RS11695 () | 2535145..2536296 | - | 1152 | WP_004393991.1 | efflux RND transporter periplasmic adaptor subunit | - |
| DBX26_RS11700 () | 2536293..2536901 | - | 609 | WP_118119241.1 | TetR/AcrR family transcriptional regulator | - |
| DBX26_RS11705 () | 2537007..2537432 | - | 426 | WP_118119243.1 | S-adenosylhomocysteine hydrolase | - |
| DBX26_RS11710 () | 2537621..2538214 | - | 594 | WP_064663439.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| DBX26_RS11715 () | 2538481..2542173 | - | 3693 | WP_118119245.1 | conjugal transfer protein TraN | - |
| DBX26_RS11720 () | 2542176..2543204 | - | 1029 | WP_053980155.1 | TraU family protein | - |
| DBX26_RS11725 () | 2543188..2544312 | - | 1125 | WP_118119248.1 | pilus assembly protein | - |
| DBX26_RS11730 () | 2544323..2544835 | - | 513 | WP_174234192.1 | S26 family signal peptidase | - |
| DBX26_RS11735 () | 2544819..2545166 | - | 348 | WP_015066569.1 | hypothetical protein | - |
| DBX26_RS11740 () | 2545159..2547558 | - | 2400 | WP_118119250.1 | type IV secretion system protein TraC | - |
| DBX26_RS11745 () | 2547558..2548253 | - | 696 | WP_118119252.1 | DsbC family protein | - |
| DBX26_RS11750 () | 2548622..2548888 | + | 267 | WP_118119254.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| DBX26_RS11755 () | 2548879..2549385 | + | 507 | WP_118119256.1 | GNAT family N-acetyltransferase | Toxin Detail |
| DBX26_RS11760 () | 2549426..2549812 | - | 387 | WP_023584042.1 | hypothetical protein | - |
| DBX26_RS11765 () | 2549809..2550381 | - | 573 | WP_145573985.1 | type IV conjugative transfer system lipoprotein TraV | - |
| DBX26_RS11770 () | 2550456..2551745 | - | 1290 | WP_118119260.1 | TraB/VirB10 family protein | - |
| DBX26_RS11775 () | 2551748..2552644 | - | 897 | WP_118119809.1 | type-F conjugative transfer system secretin TraK | - |
| DBX26_RS11780 () | 2552628..2553254 | - | 627 | WP_118119262.1 | pilus assembly protein | - |
| DBX26_RS11785 () | 2553251..2553532 | - | 282 | WP_000433891.1 | type IV conjugative transfer system protein TraL | - |
| DBX26_RS11795 () | 2553766..2554062 | + | 297 | WP_118119264.1 | HigA family addiction module antidote protein | - |
| DBX26_RS25485 () | 2554068..2554223 | + | 156 | WP_162889697.1 | hypothetical protein | - |
| DBX26_RS11800 () | 2554234..2554869 | - | 636 | WP_000033753.1 | DUF4400 domain-containing protein | - |
| DBX26_RS11805 () | 2554856..2555416 | - | 561 | WP_118119266.1 | conjugative transfer protein | - |
| DBX26_RS11810 () | 2555426..2557261 | - | 1836 | WP_118119268.1 | conjugative transfer system coupling protein TraD | - |
| DBX26_RS11815 () | 2557309..2559459 | - | 2151 | WP_118119271.1 | TraI domain-containing protein | - |
| DBX26_RS11820 () | 2559598..2560509 | - | 912 | WP_008305532.1 | DUF4868 domain-containing protein | - |
| DBX26_RS11825 () | 2560509..2561072 | - | 564 | WP_032479280.1 | hypothetical protein | - |
| DBX26_RS11830 () | 2561177..2564290 | - | 3114 | WP_118119273.1 | type I restriction endonuclease subunit R | - |
| DBX26_RS11835 () | 2564287..2565576 | - | 1290 | WP_118119275.1 | AAA family ATPase | - |
| DBX26_RS11840 () | 2565578..2566783 | - | 1206 | WP_118119277.1 | restriction endonuclease subunit S | - |
| DBX26_RS11845 () | 2566780..2568339 | - | 1560 | WP_118119279.1 | type I restriction-modification system subunit M | - |
| DBX26_RS11850 () | 2568409..2569362 | - | 954 | WP_118119281.1 | WYL domain-containing protein | - |
| DBX26_RS11855 () | 2569681..2569980 | - | 300 | WP_118119283.1 | hypothetical protein | - |
| DBX26_RS11860 () | 2570180..2571088 | - | 909 | WP_118119285.1 | DNA polymerase III subunit epsilon | - |
| DBX26_RS11865 () | 2571472..2571729 | - | 258 | WP_118119287.1 | hypothetical protein | - |
| DBX26_RS11870 () | 2571728..2572177 | + | 450 | WP_023584024.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| DBX26_RS11875 () | 2572185..2573453 | + | 1269 | WP_118119289.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| DBX26_RS11880 () | 2573464..2573907 | - | 444 | WP_118119291.1 | hypothetical protein | - |
| DBX26_RS11885 () | 2574372..2575346 | + | 975 | WP_022609788.1 | ParM/StbA family protein | - |
| DBX26_RS11890 () | 2575349..2575618 | + | 270 | WP_022614393.1 | hypothetical protein | - |
| DBX26_RS11895 () | 2575620..2576861 | + | 1242 | WP_025441390.1 | Prophage integrase IntS ; Integrase | Integrase |
| DBX26_RS11900 () | 2576878..2577072 | - | 195 | WP_000127614.1 | DNA-binding protein | - |
| DBX26_RS11910 () | 2577913..2578368 | - | 456 | WP_065302831.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| DBX26_RS11915 () | 2578441..2578839 | - | 399 | WP_118119295.1 | DNA polymerase III subunit psi | - |
| DBX26_RS11920 () | 2579050..2579553 | - | 504 | WP_014232874.1 | N-acetyltransferase | - |
| DBX26_RS11925 () | 2579537..2580064 | - | 528 | WP_014232875.1 | SCP2 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|