MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 97326 bp
Accession: NZ_CP028917 Location: 4336229..4433554 Organism: Pseudomonas aeruginosa strain JB2 Replicon: chromosome
Accession: NZ_CP028917 Location: 4336229..4433554 Organism: Pseudomonas aeruginosa strain JB2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5B40_RS20520 () | 4332483..4333016 | - | 534 | WP_003090076.1 | hypothetical protein | - |
| C5B40_RS20525 () | 4333107..4336085 | - | 2979 | WP_024946974.1 | transporter substrate-binding domain-containing protein | - |
| C5B40_RS20530 () | 4336722..4337777 | + | 1056 | WP_031759292.1 | hypothetical protein | VF |
| C5B40_RS20535 () | 4338965..4339711 | + | 747 | WP_003098991.1 | hypothetical protein | - |
| C5B40_RS20540 () | 4339830..4340042 | + | 213 | WP_003090093.1 | AlpA family transcriptional regulator | - |
| C5B40_RS20545 () | 4340085..4340960 | + | 876 | WP_003098988.1 | Sporulation initiation inhibitor protein Soj | VF |
| C5B40_RS20550 () | 4340944..4341213 | + | 270 | WP_003050422.1 | hypothetical protein | - |
| C5B40_RS20555 () | 4341206..4342885 | + | 1680 | WP_003098985.1 | ParB family protein | - |
| C5B40_RS20560 () | 4342900..4343460 | + | 561 | WP_024946973.1 | DUF2857 domain-containing protein | - |
| C5B40_RS20565 () | 4343464..4344702 | + | 1239 | WP_108565238.1 | hypothetical protein | - |
| C5B40_RS20570 () | 4345132..4345923 | + | 792 | WP_003098981.1 | TIGR03761 family integrating conjugative element protein | - |
| C5B40_RS20575 () | 4345920..4346447 | + | 528 | WP_003098978.1 | DUF3158 family protein | - |
| C5B40_RS20580 () | 4346521..4346961 | + | 441 | WP_003098976.1 | single-stranded DNA-binding protein | - |
| C5B40_RS20585 () | 4347245..4349275 | + | 2031 | WP_003098974.1 | DNA topoisomerase III | - |
| C5B40_RS20590 () | 4349999..4350634 | - | 636 | WP_003098972.1 | cation diffusion facilitator family transporter | - |
| C5B40_RS33045 () | 4351019..4351255 | + | 237 | WP_003098970.1 | hypothetical protein | - |
| C5B40_RS33050 () | 4351280..4351642 | + | 363 | WP_196588568.1 | DUF3703 domain-containing protein | - |
| C5B40_RS20600 () | 4351710..4352108 | - | 399 | WP_003098965.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| C5B40_RS20605 () | 4352200..4355112 | + | 2913 | WP_003098961.1 | heavy metal translocating P-type ATPase | - |
| C5B40_RS20610 () | 4355116..4355616 | + | 501 | WP_003098955.1 | lipoprotein signal peptidase | - |
| C5B40_RS20615 () | 4355953..4356264 | + | 312 | WP_003108988.1 | hypothetical protein | - |
| C5B40_RS20620 () | 4356563..4356814 | + | 252 | WP_005408894.1 | hypothetical protein | - |
| C5B40_RS20625 () | 4356836..4357228 | + | 393 | WP_003098949.1 | hypothetical protein | - |
| C5B40_RS20630 () | 4357442..4358179 | + | 738 | WP_003098947.1 | hypothetical protein | - |
| C5B40_RS20635 () | 4358276..4358554 | + | 279 | WP_003098943.1 | hypothetical protein | - |
| C5B40_RS20640 () | 4358843..4359667 | + | 825 | WP_003098941.1 | hypothetical protein | - |
| C5B40_RS20645 () | 4359812..4360000 | + | 189 | WP_005408893.1 | hypothetical protein | - |
| C5B40_RS20650 () | 4359929..4360336 | - | 408 | WP_003098939.1 | Hg(II)-responsive transcriptional regulator | - |
| C5B40_RS20655 () | 4360408..4360758 | + | 351 | WP_003098936.1 | mercuric ion transporter MerT | - |
| C5B40_RS20660 () | 4360771..4361076 | + | 306 | WP_003098934.1 | mercury resistance system periplasmic binding protein MerP | - |
| C5B40_RS20665 () | 4361087..4362775 | + | 1689 | WP_003098932.1 | mercury(II) reductase | - |
| C5B40_RS20670 () | 4362800..4363791 | + | 992 | Protein_3989 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| C5B40_RS20675 () | 4363837..4364121 | + | 285 | WP_031629745.1 | DUF3085 domain-containing protein | - |
| C5B40_RS20680 () | 4364429..4364713 | + | 285 | WP_003098923.1 | hypothetical protein | - |
| C5B40_RS20685 () | 4365024..4365929 | + | 906 | WP_003098919.1 | DUF3577 domain-containing protein | - |
| C5B40_RS20690 () | 4366075..4366902 | + | 828 | WP_003098915.1 | DUF945 domain-containing protein | - |
| C5B40_RS20695 () | 4366997..4367686 | + | 690 | WP_003098913.1 | DUF3275 family protein | - |
| C5B40_RS20700 () | 4367781..4368119 | + | 339 | Protein_3995 | hypothetical protein | - |
| C5B40_RS20705 () | 4368226..4368633 | + | 408 | WP_003098908.1 | hypothetical protein | - |
| C5B40_RS20710 () | 4368650..4368910 | + | 261 | WP_003098905.1 | hypothetical protein | - |
| C5B40_RS20715 () | 4368987..4369634 | + | 648 | WP_003098901.1 | hypothetical protein | - |
| C5B40_RS20720 () | 4369699..4370808 | + | 1110 | WP_003098899.1 | O-methyltransferase | - |
| C5B40_RS20725 () | 4370859..4371179 | + | 321 | WP_003098896.1 | hypothetical protein | - |
| C5B40_RS20730 () | 4371269..4371574 | + | 306 | WP_003098895.1 | hypothetical protein | - |
| C5B40_RS20735 () | 4371711..4373990 | + | 2280 | WP_003098893.1 | DEAD/DEAH box helicase | - |
| C5B40_RS20740 () | 4374129..4374728 | + | 600 | WP_003098890.1 | hypothetical protein | VF |
| C5B40_RS20745 () | 4374725..4375369 | + | 645 | WP_003098888.1 | hypothetical protein | - |
| C5B40_RS20750 () | 4375382..4376119 | + | 738 | WP_003098886.1 | TIGR03759 family integrating conjugative element protein | - |
| C5B40_RS20755 () | 4376101..4376691 | + | 591 | WP_003109780.1 | hypothetical protein | VF |
| C5B40_RS20760 () | 4376688..4377236 | + | 549 | WP_003109779.1 | integrating conjugative element protein | - |
| C5B40_RS20765 () | 4377241..4379433 | + | 2193 | WP_108565239.1 | type IV conjugative transfer system coupling protein TraD | - |
| C5B40_RS20770 () | 4379430..4380179 | + | 750 | WP_003105620.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| C5B40_RS20775 () | 4380220..4382844 | - | 2625 | WP_003116812.1 | AAA family ATPase | - |
| C5B40_RS20780 () | 4382854..4383579 | - | 726 | WP_003050273.1 | CBASS effector endonuclease NucC | - |
| C5B40_RS20785 () | 4383618..4384520 | - | 903 | WP_003105624.1 | nucleotidyltransferase domain-containing protein | - |
| C5B40_RS20790 () | 4384520..4385020 | - | 501 | WP_003090159.1 | hypothetical protein | - |
| C5B40_RS20795 () | 4385017..4385487 | - | 471 | WP_003105626.1 | hypothetical protein | - |
| C5B40_RS20800 () | 4385484..4386398 | - | 915 | WP_003105629.1 | AAA family ATPase | - |
| C5B40_RS20805 () | 4386416..4386991 | - | 576 | WP_003109777.1 | PIN domain-containing protein | Toxin Detail |
| C5B40_RS20810 () | 4386988..4387458 | - | 471 | WP_003050245.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| C5B40_RS20815 () | 4387662..4388045 | + | 384 | WP_003105635.1 | RAQPRD family integrative conjugative element protein | - |
| C5B40_RS20820 () | 4388042..4388275 | + | 234 | WP_003050225.1 | TIGR03758 family integrating conjugative element protein | - |
| C5B40_RS20825 () | 4388292..4388651 | + | 360 | WP_003090173.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| C5B40_RS20830 () | 4388663..4389061 | + | 399 | WP_003105639.1 | TIGR03750 family conjugal transfer protein | - |
| C5B40_RS20835 () | 4389058..4389750 | + | 693 | WP_003105641.1 | TIGR03746 family integrating conjugative element protein | - |
| C5B40_RS20840 () | 4389747..4390658 | + | 912 | WP_003105643.1 | TIGR03749 family integrating conjugative element protein | - |
| C5B40_RS20845 () | 4390648..4392066 | + | 1419 | WP_003109776.1 | TIGR03752 family integrating conjugative element protein | - |
| C5B40_RS20850 () | 4392047..4392496 | + | 450 | WP_003109775.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| C5B40_RS20855 () | 4392496..4395387 | + | 2892 | WP_003105079.1 | conjugative transfer ATPase | - |
| C5B40_RS20860 () | 4395412..4396179 | + | 768 | WP_003090202.1 | thioredoxin domain-containing protein | - |
| C5B40_RS20865 () | 4396355..4396849 | + | 495 | WP_003090203.1 | DNA repair protein RadC | - |
| C5B40_RS20870 () | 4397014..4397460 | + | 447 | WP_003109772.1 | TIGR03757 family integrating conjugative element protein | - |
| C5B40_RS20875 () | 4397457..4398407 | + | 951 | WP_003109771.1 | TIGR03756 family integrating conjugative element protein | - |
| C5B40_RS20880 () | 4398417..4399811 | + | 1395 | WP_003109770.1 | integrating conjugative element protein | - |
| C5B40_RS20885 () | 4399808..4400167 | + | 360 | WP_003090212.1 | hypothetical protein | - |
| C5B40_RS20890 () | 4400181..4401701 | + | 1521 | WP_003090214.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| C5B40_RS20895 () | 4401713..4402078 | - | 366 | WP_003090216.1 | DUF3742 family protein | - |
| C5B40_RS20900 () | 4402163..4402795 | - | 633 | WP_003090219.1 | RES family NAD+ phosphorylase | - |
| C5B40_RS20905 () | 4402808..4403434 | - | 627 | WP_003109769.1 | hypothetical protein | - |
| C5B40_RS20915 () | 4403750..4405597 | + | 1848 | WP_003109768.1 | TraI domain-containing protein | - |
| C5B40_RS20920 () | 4405783..4406936 | + | 1154 | WP_108565240.1 | IS3 family transposase ISAisp2 | Transposase |
| C5B40_RS20925 () | 4407129..4408325 | + | 1197 | Protein_4039 | Efflux pump periplasmic linker BepF | VF |
| C5B40_RS20930 () | 4408418..4408863 | + | 446 | Protein_4040 | Efflux pump membrane transporter BepE | VF |
| C5B40_RS20935 () | 4409146..4410609 | + | 1464 | Protein_4041 | chromosome partitioning protein ParB | - |
| C5B40_RS20940 () | 4410817..4411347 | - | 531 | WP_003107230.1 | N-acetyltransferase | - |
| C5B40_RS20945 () | 4411353..4412582 | - | 1230 | WP_003107233.1 | chromate efflux transporter | - |
| C5B40_RS20950 () | 4412579..4412881 | - | 303 | WP_003107234.1 | PadR family transcriptional regulator | - |
| C5B40_RS20955 () | 4412980..4413402 | - | 423 | WP_003107236.1 | arsenate reductase (glutaredoxin) | - |
| C5B40_RS20960 () | 4413417..4414502 | - | 1086 | WP_003109696.1 | ACR3 family arsenite efflux transporter | - |
| C5B40_RS20965 () | 4414513..4415010 | - | 498 | WP_003107241.1 | arsenate reductase ArsC | - |
| C5B40_RS20970 () | 4415023..4415493 | - | 471 | WP_003107243.1 | glyoxalase/bleomycin resistance/dioxygenase family protein | - |
| C5B40_RS20975 () | 4415507..4415836 | - | 330 | WP_003116799.1 | helix-turn-helix domain-containing protein | - |
| C5B40_RS20985 () | 4416784..4418220 | - | 1437 | WP_108565241.1 | Sensor kinase CusS | VF |
| C5B40_RS20990 () | 4418192..4418884 | - | 693 | WP_003097513.1 | Transcriptional regulatory protein CusR | VF |
| C5B40_RS20995 () | 4419139..4421040 | + | 1902 | WP_003097515.1 | copper resistance system multicopper oxidase | - |
| C5B40_RS21000 () | 4421066..4422046 | + | 981 | WP_005408883.1 | copper resistance protein B | - |
| C5B40_RS21005 () | 4422084..4422569 | + | 486 | WP_003090303.1 | DUF411 domain-containing protein | - |
| C5B40_RS21010 () | 4422603..4422875 | + | 273 | WP_003097518.1 | DUF2933 domain-containing protein | - |
| C5B40_RS21015 () | 4422989..4425469 | + | 2481 | WP_071534985.1 | heavy metal translocating P-type ATPase | - |
| C5B40_RS21020 () | 4425611..4425997 | + | 387 | WP_003090319.1 | copper homeostasis periplasmic binding protein CopC | - |
| C5B40_RS21025 () | 4426002..4426928 | + | 927 | WP_003097522.1 | copper homeostasis membrane protein CopD | - |
| C5B40_RS21030 () | 4427057..4427341 | + | 285 | WP_003090336.1 | CopK family periplasmic copper-binding protein | - |
| C5B40_RS21035 () | 4427573..4428463 | + | 891 | WP_003097524.1 | LysR family transcriptional regulator | - |
| C5B40_RS21040 () | 4428468..4428773 | - | 306 | WP_003097526.1 | helix-turn-helix domain-containing protein | - |
| C5B40_RS21045 () | 4428980..4429771 | - | 792 | WP_003097544.1 | IS21 family transposase ISPa36 | Transposase |
| C5B40_RS21050 () | 4429758..4431257 | - | 1500 | WP_003097546.1 | IS21 family transposase ISPa36 | Transposase |
| C5B40_RS21055 () | 4431377..4433311 | - | 1935 | WP_003097548.1 | Prophage integrase IntS ; Integrase | Integrase |
| C5B40_RS21065 () | 4433683..4434243 | - | 561 | WP_003090349.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| C5B40_RS21070 () | 4434277..4436103 | - | 1827 | WP_003090350.1 | excinuclease ABC subunit UvrC | - |
| C5B40_RS21075 () | 4436104..4436748 | - | 645 | WP_003090351.1 | UvrY/SirA/GacA family response regulator transcription factor | - |
| C5B40_RS21085 () | 4437090..4438238 | - | 1149 | WP_003119987.1 | 2-heptyl-3-hydroxy-4(1H)-quinolone synthase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|