MGE detailed information
MGE type: Conjugative plasmid MGE length: 70299 bp
Accession: NZ_CP028854 Location: 1..70299 Organism: Klebsiella pneumoniae strain 3214 Replicon: plasmid pCTX_3214
Accession: NZ_CP028854 Location: 1..70299 Organism: Klebsiella pneumoniae strain 3214 Replicon: plasmid pCTX_3214
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DBX64_RS29350 () | 2..475 | + | 474 | WP_000549568.1 | hypothetical protein | - |
| DBX64_RS29355 () | 555..773 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| DBX64_RS29360 () | 801..1148 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| DBX64_RS29365 () | 1274..3904 | + | 2631 | WP_048295894.1 | type IV secretion system protein TraC | - |
| DBX64_RS29370 () | 3901..4287 | + | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| DBX64_RS29375 () | 4284..4916 | + | 633 | WP_048295895.1 | type-F conjugative transfer system protein TraW | - |
| DBX64_RS29380 () | 4913..5905 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| DBX64_RS29385 () | 5935..6240 | + | 306 | WP_000224412.1 | hypothetical protein | - |
| DBX64_RS29390 () | 6249..6887 | + | 639 | WP_001080256.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| DBX64_RS29395 () | 6884..8734 | + | 1851 | WP_000821856.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| DBX64_RS29400 () | 8761..9018 | + | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| DBX64_RS29405 () | 9005..9754 | + | 750 | WP_001336806.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| DBX64_RS29410 () | 9768..10112 | + | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| DBX64_RS29415 () | 10231..10515 | + | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| DBX64_RS29420 () | 10502..11047 | + | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| DBX64_RS29425 () | 10977..11324 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| DBX64_RS29430 () | 11272..11697 | + | 426 | WP_001444237.1 | F-type conjugal transfer protein TrbF | - |
| DBX64_RS29435 () | 11675..13057 | + | 1383 | WP_001309243.1 | conjugal transfer protein TraH | - |
| DBX64_RS29440 () | 13054..15876 | + | 2823 | WP_001007039.1 | conjugal transfer mating pair stabilization protein TraG | - |
| DBX64_RS29445 () | 15892..16377 | + | 486 | WP_000605870.1 | hypothetical protein | - |
| DBX64_RS29450 () | 16426..17157 | + | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| DBX64_RS29455 () | 17360..18097 | + | 738 | WP_000199905.1 | hypothetical protein | - |
| DBX64_RS29460 () | 18148..20355 | + | 2208 | WP_001617742.1 | type IV conjugative transfer system coupling protein TraD | - |
| DBX64_RS29465 () | 20355..25625 | + | 5271 | WP_000948354.1 | Multifunctional conjugation protein TraI | Relaxase |
| DBX64_RS29470 () | 25645..26391 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| DBX64_RS29475 () | 26450..27310 | + | 861 | WP_000704523.1 | putative protein YcjY | VF |
| DBX64_RS29480 () | 27413..27973 | + | 561 | WP_000139323.1 | fertility inhibition protein FinO | - |
| DBX64_RS29485 () | 28102..28314 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| DBX64_RS29490 () | 28559..29020 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| DBX64_RS29495 () | 29066..29275 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| DBX64_RS29500 () | 29313..29903 | + | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| DBX64_RS29505 () | 30143..30397 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| DBX64_RS29510 () | 30635..30709 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| DBX64_RS29515 () | 30702..31559 | + | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| DBX64_RS29520 () | 32473..32742 | + | 270 | WP_012881119.1 | ABC transporter ATPase | Antitoxin Detail |
| DBX64_RS29525 () | 32739..33020 | + | 282 | WP_012881118.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DBX64_RS29530 () | 33066..33914 | + | 849 | WP_012881117.1 | 3'-5' exonuclease | - |
| DBX64_RS29535 () | 34031..34513 | + | 483 | WP_001311056.1 | hypothetical protein | - |
| DBX64_RS29540 () | 34548..35654 | - | 1107 | Protein_39 | IS5 family transposase IS903B | Transposase |
| DBX64_RS29545 () | 36106..36981 | - | 876 | WP_001617865.1 | hypothetical protein | ARG |
| DBX64_RS29550 () | 37231..38493 | - | 1263 | WP_194429571.1 | IS1380 family transposase ISEcp1 | Transposase |
| DBX64_RS29555 () | 38837..40024 | - | 1188 | WP_025999368.1 | MFS transporter | - |
| DBX64_RS29560 () | 40081..40842 | - | 762 | WP_000020504.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| DBX64_RS29565 () | 40842..41879 | - | 1038 | WP_001545318.1 | Hemin transport system permease protein HmuU | VF |
| DBX64_RS29570 () | 41879..42877 | - | 999 | WP_012881113.1 | ABC transporter substrate-binding protein | - |
| DBX64_RS29575 () | 43027..43185 | - | 159 | Protein_46 | transposase | - |
| DBX64_RS29580 () | 43228..43470 | - | 243 | Protein_47 | helix-turn-helix domain-containing protein | - |
| DBX64_RS29585 () | 43728..44078 | - | 351 | WP_001414994.1 | plasmid partitioning/stability family protein | - |
| DBX64_RS29590 () | 44081..45043 | - | 963 | WP_000959878.1 | plasmid segregation protein ParM | - |
| DBX64_RS29595 () | 45190..45483 | + | 294 | WP_032142565.1 | hypothetical protein | - |
| DBX64_RS29600 () | 45559..46242 | + | 684 | WP_012881149.1 | DNA methylase | - |
| DBX64_RS29605 () | 46243..46464 | + | 222 | WP_012881148.1 | hypothetical protein | - |
| DBX64_RS29610 () | 46478..46912 | + | 435 | WP_012917669.1 | DUF1380 family protein | - |
| DBX64_RS29615 () | 46963..47739 | + | 777 | WP_025999342.1 | hypothetical protein | - |
| DBX64_RS29620 () | 48155..48580 | + | 426 | WP_001198895.1 | antirestriction protein | - |
| DBX64_RS29625 () | 48627..49049 | + | 423 | WP_012917670.1 | DUF1380 family protein | - |
| DBX64_RS29630 () | 49046..49237 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| DBX64_RS29635 () | 50274..50504 | + | 231 | WP_000155844.1 | hypothetical protein | - |
| DBX64_RS29640 () | 50556..51917 | + | 1362 | WP_012917672.1 | DUF3560 domain-containing protein | - |
| DBX64_RS29645 () | 51964..52527 | + | 564 | WP_012881140.1 | class I SAM-dependent methyltransferase | - |
| DBX64_RS29650 () | 53424..53945 | + | 522 | WP_012881138.1 | single-stranded DNA-binding protein | - |
| DBX64_RS29655 () | 54001..54234 | + | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| DBX64_RS29660 () | 54298..56256 | + | 1959 | WP_012881137.1 | ParB/RepB/Spo0J family partition protein | - |
| DBX64_RS29665 () | 56311..56745 | + | 435 | WP_000845949.1 | conjugation system SOS inhibitor PsiB | - |
| DBX64_RS29670 () | 56742..57461 | + | 720 | WP_012881136.1 | plasmid SOS inhibition protein A | - |
| DBX64_RS29675 () | 57458..57772 | + | 315 | WP_000872086.1 | hypothetical protein | - |
| - () | 57721..57928 | + | 208 | NuclAT_0 | - | - |
| - () | 57721..57928 | + | 208 | NuclAT_0 | - | - |
| - () | 57721..57928 | + | 208 | NuclAT_0 | - | - |
| - () | 57721..57928 | + | 208 | NuclAT_0 | - | - |
| DBX64_RS29680 () | 57981..58142 | + | 162 | WP_012881135.1 | type I toxin-antitoxin system Hok family toxin | - |
| DBX64_RS29685 () | 58380..58649 | - | 270 | WP_001388591.1 | hypothetical protein | - |
| DBX64_RS29690 () | 58988..59311 | + | 324 | WP_000533253.1 | hypothetical protein | - |
| DBX64_RS29695 () | 59370..59612 | + | 243 | WP_000540588.1 | hypothetical protein | - |
| DBX64_RS29700 () | 60639..60935 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| DBX64_RS29705 () | 61045..61866 | + | 822 | WP_001234437.1 | DUF945 domain-containing protein | - |
| DBX64_RS29710 () | 62162..62764 | - | 603 | WP_000243715.1 | hypothetical protein | VF |
| DBX64_RS29715 () | 63087..63470 | + | 384 | WP_001354030.1 | relaxosome protein TraM | - |
| DBX64_RS29720 () | 63664..64335 | + | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| DBX64_RS29725 () | 64472..64699 | + | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| DBX64_RS29730 () | 64732..65091 | + | 360 | WP_001098992.1 | type IV conjugative transfer system pilin TraA | - |
| DBX64_RS29735 () | 65106..65417 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| DBX64_RS29740 () | 65439..66005 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| DBX64_RS29745 () | 65992..66720 | + | 729 | WP_001230772.1 | type-F conjugative transfer system secretin TraK | - |
| DBX64_RS29750 () | 66720..68171 | + | 1452 | WP_000146675.1 | conjugal transfer protein TraB | - |
| DBX64_RS29755 () | 68140..68727 | + | 588 | WP_001444176.1 | conjugal transfer protein TraP | - |
| DBX64_RS29760 () | 68666..69034 | + | 369 | WP_001315561.1 | conjugal transfer protein TrbD | - |
| DBX64_RS29765 () | 69031..69546 | + | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| DBX64_RS29770 () | 69681..69902 | + | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|