MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 112075 bp
Accession: NZ_CP028849 Location: 5164090..5276164 Organism: Pseudomonas aeruginosa strain IMP68 Replicon: chromosome
Accession: NZ_CP028849 Location: 5164090..5276164 Organism: Pseudomonas aeruginosa strain IMP68 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DBZ62_RS24590 () | 5159608..5163861 | + | 4254 | WP_034020464.1 | two-partner secretion system exoprotein TpsA4 | - |
| DBZ62_RS24595 () | 5164227..5165087 | + | 861 | WP_003158180.1 | ParA family protein | - |
| DBZ62_RS24600 () | 5165089..5165814 | + | 726 | WP_003103853.1 | hypothetical protein | - |
| DBZ62_RS24605 () | 5165811..5166308 | + | 498 | WP_003111783.1 | hypothetical protein | - |
| DBZ62_RS24610 () | 5166314..5167207 | + | 894 | WP_017002285.1 | Lar family restriction alleviation protein | - |
| DBZ62_RS24615 () | 5167207..5167908 | + | 702 | WP_017002284.1 | DUF2786 domain-containing protein | - |
| DBZ62_RS24620 () | 5167905..5168612 | + | 708 | WP_003122069.1 | HNH endonuclease | - |
| DBZ62_RS24625 () | 5168596..5168814 | + | 219 | WP_003103847.1 | hypothetical protein | - |
| DBZ62_RS24630 () | 5168811..5170154 | + | 1344 | WP_017002283.1 | replicative DNA helicase | - |
| DBZ62_RS30965 () | 5170593..5171039 | - | 447 | WP_017002282.1 | hypothetical protein | - |
| DBZ62_RS24640 () | 5171484..5171765 | - | 282 | WP_017002281.1 | hypothetical protein | - |
| DBZ62_RS24645 () | 5171943..5172128 | + | 186 | WP_003157042.1 | hypothetical protein | - |
| DBZ62_RS24650 () | 5172118..5172645 | + | 528 | WP_017002280.1 | hypothetical protein | - |
| DBZ62_RS24655 () | 5172642..5172899 | + | 258 | WP_004352848.1 | hypothetical protein | - |
| DBZ62_RS24660 () | 5172892..5173389 | + | 498 | WP_147719731.1 | hypothetical protein | - |
| DBZ62_RS24665 () | 5173382..5173615 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| DBZ62_RS24670 () | 5173615..5174631 | + | 1017 | WP_003158179.1 | nucleoid-associated protein YejK | - |
| DBZ62_RS24675 () | 5174634..5174882 | + | 249 | WP_003111972.1 | Arc family DNA-binding protein | - |
| DBZ62_RS24680 () | 5174879..5176612 | + | 1734 | WP_003158178.1 | ParB family protein | - |
| DBZ62_RS24685 () | 5176640..5177395 | + | 756 | WP_003125263.1 | DUF2857 domain-containing protein | - |
| DBZ62_RS24690 () | 5177398..5178723 | + | 1326 | WP_079263474.1 | hypothetical protein | - |
| DBZ62_RS24700 () | 5179465..5179662 | + | 198 | WP_003105756.1 | hypothetical protein | - |
| DBZ62_RS24705 () | 5179818..5180546 | + | 729 | WP_003105754.1 | TIGR03761 family integrating conjugative element protein | - |
| DBZ62_RS24710 () | 5180552..5181100 | + | 549 | WP_003105753.1 | DUF3158 family protein | - |
| DBZ62_RS24715 () | 5181147..5181986 | + | 840 | WP_025997473.1 | Rha family transcriptional regulator | - |
| DBZ62_RS24720 () | 5182016..5182504 | + | 489 | WP_003105748.1 | single-stranded DNA-binding protein | - |
| DBZ62_RS24725 () | 5182612..5182857 | + | 246 | WP_023102333.1 | CrpP family protein | - |
| DBZ62_RS24730 () | 5182923..5183141 | - | 219 | WP_003105747.1 | hypothetical protein | - |
| DBZ62_RS24740 () | 5183341..5183601 | - | 261 | WP_003105742.1 | hypothetical protein | - |
| DBZ62_RS24745 () | 5183623..5184033 | - | 411 | WP_003105740.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| DBZ62_RS24750 () | 5184033..5184263 | - | 231 | WP_003158175.1 | antitoxin | Antitoxin Detail |
| DBZ62_RS24755 () | 5184519..5186438 | + | 1920 | WP_004352838.1 | type I DNA topoisomerase | - |
| DBZ62_RS24760 () | 5186746..5186955 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| DBZ62_RS24765 () | 5187176..5189065 | + | 1890 | WP_003105732.1 | hypothetical protein | - |
| DBZ62_RS24770 () | 5189062..5191038 | + | 1977 | WP_017002277.1 | DEAD/DEAH box helicase | - |
| DBZ62_RS24775 () | 5191179..5191523 | + | 345 | WP_003448665.1 | hypothetical protein | - |
| DBZ62_RS24780 () | 5191594..5191884 | - | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| DBZ62_RS24785 () | 5191881..5192180 | - | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DBZ62_RS24790 () | 5192382..5193503 | + | 1122 | WP_017002276.1 | hypothetical protein | VF |
| DBZ62_RS24795 () | 5193503..5195212 | + | 1710 | WP_020751093.1 | Outer membrane lipoprotein BfpB | VF |
| DBZ62_RS24800 () | 5195216..5196541 | + | 1326 | WP_017002275.1 | type 4b pilus protein PilO2 | - |
| DBZ62_RS24805 () | 5196531..5197064 | + | 534 | WP_017002274.1 | type IV pilus biogenesis protein PilP | - |
| DBZ62_RS24810 () | 5197073..5198653 | + | 1581 | WP_003149523.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| DBZ62_RS24815 () | 5198653..5199732 | + | 1080 | WP_003109360.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| DBZ62_RS24820 () | 5199754..5200284 | + | 531 | WP_003099765.1 | hypothetical protein | VF |
| DBZ62_RS24825 () | 5200281..5201222 | + | 942 | WP_003109361.1 | Flp pilus assembly complex ATPase component TadA | - |
| DBZ62_RS24830 () | 5201227..5202555 | + | 1329 | WP_003109362.1 | hypothetical protein | VF |
| DBZ62_RS24835 () | 5202584..5203021 | + | 438 | WP_017002272.1 | hypothetical protein | VF |
| DBZ62_RS24845 () | 5203943..5204332 | + | 390 | WP_016264238.1 | hypothetical protein | - |
| DBZ62_RS30970 () | 5204405..5204581 | + | 177 | WP_003149538.1 | hypothetical protein | - |
| DBZ62_RS24850 () | 5205043..5205522 | + | 480 | WP_017002271.1 | DUF3577 domain-containing protein | - |
| DBZ62_RS30975 () | 5205661..5205819 | + | 159 | WP_017002270.1 | hypothetical protein | - |
| DBZ62_RS24855 () | 5205893..5206090 | + | 198 | WP_009315817.1 | hypothetical protein | - |
| DBZ62_RS24865 () | 5206576..5207283 | + | 708 | WP_017002269.1 | hypothetical protein | - |
| DBZ62_RS24870 () | 5207519..5207869 | + | 351 | WP_017002268.1 | hypothetical protein | - |
| DBZ62_RS24875 () | 5207926..5208558 | + | 633 | WP_015503590.1 | DUF3275 family protein | - |
| DBZ62_RS24880 () | 5208555..5208836 | + | 282 | WP_017002267.1 | hypothetical protein | - |
| DBZ62_RS24885 () | 5208906..5209268 | + | 363 | WP_017002266.1 | hypothetical protein | - |
| DBZ62_RS24890 () | 5209336..5209590 | + | 255 | WP_017002265.1 | hypothetical protein | - |
| DBZ62_RS24895 () | 5209683..5210288 | + | 606 | WP_017002264.1 | hypothetical protein | - |
| DBZ62_RS24900 () | 5210318..5211763 | + | 1446 | WP_017002263.1 | class I SAM-dependent methyltransferase | - |
| DBZ62_RS24905 () | 5211868..5214117 | + | 2250 | WP_017002262.1 | DEAD/DEAH box helicase | - |
| DBZ62_RS24910 () | 5214219..5214653 | - | 435 | WP_169433239.1 | hypothetical protein | - |
| DBZ62_RS24915 () | 5214801..5216075 | - | 1275 | WP_017002260.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| DBZ62_RS24920 () | 5216062..5216493 | - | 432 | WP_004347940.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| DBZ62_RS24925 () | 5216598..5217281 | + | 684 | WP_017002259.1 | SOS response-associated peptidase family protein | - |
| DBZ62_RS24935 () | 5217990..5219152 | + | 1163 | WP_096243049.1 | IS3 family transposase IS222 | Transposase |
| DBZ62_RS24940 () | 5219365..5220060 | + | 696 | WP_025997412.1 | hypothetical protein | - |
| DBZ62_RS24945 () | 5220071..5220826 | + | 756 | WP_017001402.1 | TIGR03759 family integrating conjugative element protein | - |
| DBZ62_RS24950 () | 5220811..5221392 | + | 582 | WP_003121011.1 | hypothetical protein | VF |
| DBZ62_RS24955 () | 5221389..5221889 | + | 501 | WP_017001403.1 | integrating conjugative element protein | - |
| DBZ62_RS24960 () | 5221898..5222167 | + | 270 | WP_009316303.1 | hypothetical protein | - |
| DBZ62_RS24965 () | 5222171..5224402 | + | 2232 | WP_017001404.1 | type IV conjugative transfer system coupling protein TraD | - |
| DBZ62_RS24970 () | 5224402..5225148 | + | 747 | WP_017001405.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| DBZ62_RS24975 () | 5225159..5226640 | + | 1482 | WP_017001406.1 | UvrD-helicase domain-containing protein | - |
| DBZ62_RS24980 () | 5226748..5227053 | + | 306 | WP_017001407.1 | hypothetical protein | - |
| DBZ62_RS24985 () | 5227147..5227485 | + | 339 | WP_017001408.1 | RAQPRD family integrative conjugative element protein | - |
| DBZ62_RS24990 () | 5227482..5227721 | + | 240 | WP_003125330.1 | TIGR03758 family integrating conjugative element protein | - |
| DBZ62_RS24995 () | 5227739..5228095 | + | 357 | WP_017001409.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| DBZ62_RS25000 () | 5228106..5228492 | + | 387 | WP_017001410.1 | TIGR03750 family conjugal transfer protein | - |
| DBZ62_RS25005 () | 5228489..5229148 | + | 660 | WP_017001411.1 | TIGR03746 family integrating conjugative element protein | - |
| DBZ62_RS25010 () | 5229145..5230029 | + | 885 | WP_017001412.1 | TIGR03749 family integrating conjugative element protein | - |
| DBZ62_RS25015 () | 5230013..5231518 | + | 1506 | WP_025324752.1 | TIGR03752 family integrating conjugative element protein | - |
| DBZ62_RS25020 () | 5231496..5231939 | + | 444 | WP_017001414.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| DBZ62_RS25025 () | 5231939..5234887 | + | 2949 | WP_025997414.1 | conjugative transfer ATPase | - |
| DBZ62_RS25030 () | 5234884..5235168 | + | 285 | WP_017001416.1 | hypothetical protein | - |
| DBZ62_RS30980 () | 5235165..5235650 | + | 486 | Protein_4820 | DsbA family protein | - |
| DBZ62_RS30985 () | 5236094..5236393 | + | 300 | Protein_4821 | phosphoribulokinase | - |
| DBZ62_RS25040 () | 5236560..5236829 | + | 270 | Protein_4822 | DDE-type integrase/transposase/recombinase | - |
| DBZ62_RS25045 () | 5237063..5238107 | + | 1045 | Protein_4823 | IS110 family transposase ISEc21 | Transposase |
| DBZ62_RS25050 () | 5238120..5238304 | + | 185 | Protein_4824 | IS3 family transposase | - |
| DBZ62_RS25055 () | 5238644..5239834 | - | 1191 | WP_079263448.1 | EAL domain-containing protein | - |
| DBZ62_RS25060 () | 5240055..5240651 | + | 597 | WP_017001420.1 | recombinase family protein | - |
| DBZ62_RS25065 () | 5240726..5241277 | + | 552 | WP_017001421.1 | hypothetical protein | VF |
| DBZ62_RS25070 () | 5241319..5241831 | + | 513 | WP_017001422.1 | hypothetical protein | VF |
| DBZ62_RS25075 () | 5241831..5242379 | + | 549 | WP_017001423.1 | spore coat U domain-containing protein | - |
| DBZ62_RS25080 () | 5242398..5243195 | + | 798 | WP_017001424.1 | hypothetical protein | VF |
| DBZ62_RS25085 () | 5243198..5245579 | + | 2382 | WP_147719732.1 | F1 capsule-anchoring protein | VF |
| DBZ62_RS25090 () | 5245576..5246523 | + | 948 | WP_147719733.1 | spore coat U domain-containing protein | - |
| DBZ62_RS25095 () | 5246677..5247009 | + | 333 | Protein_4833 | transposase | - |
| DBZ62_RS25100 () | 5247069..5247921 | + | 853 | WP_086008295.1 | IS5 family transposase ISPst8 | Transposase |
| DBZ62_RS25105 () | 5248081..5249427 | + | 1347 | WP_079263478.1 | ISNCY family transposase ISLad2 | Transposase |
| DBZ62_RS25110 () | 5249438..5249791 | - | 354 | WP_079263477.1 | hypothetical protein | - |
| DBZ62_RS25115 () | 5250036..5250239 | + | 204 | Protein_4837 | trans-aconitate methyltransferase | - |
| DBZ62_RS25120 () | 5250377..5250808 | + | 432 | WP_003158147.1 | TIGR03757 family integrating conjugative element protein | - |
| DBZ62_RS25125 () | 5250808..5251746 | + | 939 | WP_003159688.1 | TIGR03756 family integrating conjugative element protein | - |
| DBZ62_RS25130 () | 5251764..5253146 | + | 1383 | WP_003159687.1 | integrating conjugative element protein | - |
| DBZ62_RS25135 () | 5253146..5253493 | + | 348 | WP_003125096.1 | hypothetical protein | - |
| DBZ62_RS25140 () | 5253490..5255040 | + | 1551 | WP_017002326.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| DBZ62_RS25145 () | 5255212..5255448 | - | 237 | Protein_4843 | hypothetical protein | - |
| DBZ62_RS25150 () | 5255571..5255843 | + | 273 | WP_025997478.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| DBZ62_RS25155 () | 5255847..5256197 | + | 351 | WP_017002323.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DBZ62_RS25160 () | 5256575..5265088 | - | 8514 | WP_034070288.1 | Cyclic beta-(1,2)-glucan synthase NdvB | VF |
| DBZ62_RS25165 () | 5265653..5265916 | + | 264 | WP_003125104.1 | hypothetical protein | - |
| DBZ62_RS25170 () | 5265930..5266154 | + | 225 | WP_003456722.1 | DUF1652 domain-containing protein | - |
| DBZ62_RS25175 () | 5266369..5267088 | + | 720 | WP_009875850.1 | Crp/Fnr family transcriptional regulator | - |
| DBZ62_RS25180 () | 5267159..5267521 | + | 363 | WP_017002336.1 | hypothetical protein | - |
| DBZ62_RS25185 () | 5267625..5268119 | + | 495 | WP_017002335.1 | hypothetical protein | - |
| DBZ62_RS25190 () | 5268228..5270246 | + | 2019 | WP_003125107.1 | class I SAM-dependent methyltransferase | - |
| DBZ62_RS25195 () | 5270402..5271595 | - | 1194 | WP_003158139.1 | fatty acid desaturase | - |
| DBZ62_RS30990 () | 5271983..5272339 | + | 357 | WP_015060180.1 | hypothetical protein | - |
| DBZ62_RS30995 () | 5272400..5272552 | - | 153 | WP_153274499.1 | hypothetical protein | - |
| DBZ62_RS25200 () | 5272551..5274470 | + | 1920 | WP_017002333.1 | helicase/relaxase domain-containing protein | - |
| DBZ62_RS25205 () | 5274467..5275750 | + | 1284 | WP_003158137.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| DBZ62_RS25225 () | 5276602..5279166 | - | 2565 | WP_003094682.1 | ATP-dependent chaperone ClpB | - |
| DBZ62_RS25230 () | 5279322..5280050 | - | 729 | WP_003123393.1 | peptidoglycan editing factor PgeF | - |
| DBZ62_RS25235 () | 5280047..5281009 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|