MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 151192 bp
Accession: NZ_CP028772 Location: 725914..877105 Organism: Escherichia coli strain A2 Replicon: chromosome
Accession: NZ_CP028772 Location: 725914..877105 Organism: Escherichia coli strain A2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY53_RS03500 (720919) | 720919..721536 | - | 618 | WP_001272796.1 | glycerol-3-phosphate 1-O-acyltransferase PlsY | - |
| AOY53_RS03505 (721641) | 721641..722009 | + | 369 | WP_001325893.1 | bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase | - |
| AOY53_RS03510 (722100) | 722100..722921 | + | 822 | WP_001305111.1 | undecaprenyl-diphosphate phosphatase | - |
| AOY53_RS03515 (723084) | 723084..724322 | - | 1239 | WP_000708500.1 | fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca | - |
| AOY53_RS03520 (724386) | 724386..725006 | - | 621 | WP_001125332.1 | TIGR04211 family SH3 domain-containing protein | - |
| AOY53_RS03525 (725248) | 725248..726549 | + | 1302 | WP_000046264.1 | inorganic triphosphatase | - |
| AOY53_RS03530 (726572) | 726572..729412 | + | 2841 | WP_001315860.1 | bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase | - |
| AOY53_RS03535 (729460) | 729460..730893 | + | 1434 | WP_000869178.1 | Bifunctional protein HldE | VF |
| AOY53_RS03540 (731013) | 731013..731072 | - | 60 | WP_001387082.1 | type I toxin-antitoxin system Ibs family toxin | - |
| - (730973) | 730973..731114 | + | 142 | NuclAT_7 | - | - |
| - (730973) | 730973..731114 | + | 142 | NuclAT_7 | - | - |
| - (730973) | 730973..731114 | + | 142 | NuclAT_7 | - | - |
| - (730973) | 730973..731114 | + | 142 | NuclAT_7 | - | - |
| AOY53_RS03545 (731389) | 731389..731448 | - | 60 | WP_001387081.1 | type I toxin-antitoxin system Ibs family toxin | - |
| - (731349) | 731349..731490 | + | 142 | NuclAT_2 | - | - |
| - (731349) | 731349..731490 | + | 142 | NuclAT_2 | - | - |
| - (731349) | 731349..731490 | + | 142 | NuclAT_2 | - | - |
| - (731349) | 731349..731490 | + | 142 | NuclAT_2 | - | - |
| - (731349) | 731349..731490 | + | 142 | NuclAT_8 | - | - |
| - (731349) | 731349..731490 | + | 142 | NuclAT_8 | - | - |
| - (731349) | 731349..731490 | + | 142 | NuclAT_8 | - | - |
| - (731349) | 731349..731490 | + | 142 | NuclAT_8 | - | - |
| AOY53_RS03550 (731687) | 731687..733348 | - | 1662 | WP_000341046.1 | flotillin family protein | - |
| AOY53_RS03555 (733375) | 733375..734004 | - | 630 | WP_000599947.1 | DUF1449 family protein | - |
| AOY53_RS03560 (734273) | 734273..734473 | + | 201 | WP_000350095.1 | cell surface composition regulator GlgS | - |
| AOY53_RS03565 (734516) | 734516..735580 | - | 1065 | WP_001269793.1 | fimbrial protein | - |
| AOY53_RS03570 (735582) | 735582..736331 | - | 750 | WP_001269825.1 | Chaperone protein PapD | VF |
| AOY53_RS03575 (736347) | 736347..738851 | - | 2505 | WP_000277135.1 | Outer membrane usher protein PapC | VF |
| AOY53_RS03580 (738911) | 738911..739462 | - | 552 | WP_001272149.1 | putative fimbrial-like protein YbgD | VF |
| AOY53_RS03585 (739745) | 739745..740035 | - | 291 | WP_001297598.1 | IS1182 family transposase ISBusp4 | Transposase |
| AOY53_RS03590 (740409) | 740409..741062 | + | 654 | WP_001076997.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| AOY53_RS03595 (741323) | 741323..741493 | + | 171 | WP_000469266.1 | protein YqiD | - |
| AOY53_RS03600 (741551) | 741551..742324 | - | 774 | WP_001295627.1 | zinc transporter ZupT | - |
| AOY53_RS03605 (742467) | 742467..743255 | + | 789 | WP_024184509.1 | 4,5-DOPA dioxygenase extradiol | - |
| AOY53_RS03610 (743293) | 743293..744453 | - | 1161 | WP_000442860.1 | glutathionylspermidine synthase family protein | - |
| AOY53_RS03615 (744459) | 744459..745130 | - | 672 | WP_000831543.1 | DUF1190 family protein | - |
| AOY53_RS03620 (745278) | 745278..746759 | - | 1482 | WP_000735278.1 | outer membrane channel protein TolC | - |
| AOY53_RS03625 (746964) | 746964..747593 | + | 630 | WP_000917117.1 | ADP-ribose diphosphatase | - |
| AOY53_RS03630 (747594) | 747594..748016 | + | 423 | WP_000833393.1 | DUF1249 family protein | - |
| AOY53_RS03635 (748041) | 748041..748868 | + | 828 | WP_000444747.1 | 3',5'-cyclic-AMP phosphodiesterase | - |
| AOY53_RS03640 (748868) | 748868..749449 | + | 582 | WP_240760647.1 | esterase YqiA | - |
| AOY53_RS03645 (749478) | 749478..751370 | + | 1893 | WP_000195296.1 | DNA topoisomerase IV subunit B | - |
| AOY53_RS03650 (751418) | 751418..751732 | - | 315 | WP_000958598.1 | putative quinol monooxygenase | - |
| AOY53_RS03655 (751763) | 751763..752344 | - | 582 | WP_000065430.1 | NADPH:quinone oxidoreductase MdaB | - |
| AOY53_RS03660 (752663) | 752663..752996 | + | 334 | Protein_717 | DUF2645 family protein | - |
| AOY53_RS03665 (753042) | 753042..754391 | - | 1350 | WP_000673354.1 | quorum sensing histidine kinase QseC | - |
| AOY53_RS03670 (754388) | 754388..755047 | - | 660 | WP_001221502.1 | Transcriptional regulatory protein QseB | VF |
| AOY53_RS03675 (755199) | 755199..755591 | + | 393 | WP_000712658.1 | OB fold stress tolerance protein YgiW | - |
| AOY53_RS03680 (755644) | 755644..756126 | + | 483 | WP_000183494.1 | GyrI-like domain-containing protein | - |
| AOY53_RS03685 (756672) | 756672..758930 | + | 2259 | WP_240760648.1 | DNA topoisomerase IV subunit A | - |
| AOY53_RS03690 (759164) | 759164..759901 | + | 738 | WP_000965712.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| AOY53_RS03695 (759976) | 759976..761388 | + | 1413 | WP_000059395.1 | cell division protein FtsP | - |
| AOY53_RS03700 (761499) | 761499..763718 | + | 2220 | WP_000095187.1 | YgiQ family radical SAM protein | - |
| AOY53_RS03705 (763761) | 763761..764018 | - | 258 | WP_000848528.1 | lipoprotein YqhH | - |
| AOY53_RS03710 (764069) | 764069..764995 | - | 927 | WP_000691598.1 | YbjP/YqhG family protein | - |
| AOY53_RS03715 (765195) | 765195..766022 | - | 828 | WP_000013149.1 | 2,5-didehydrogluconate reductase DkgA | - |
| AOY53_RS03720 (766127) | 766127..767290 | - | 1164 | WP_001058807.1 | alcohol dehydrogenase | - |
| AOY53_RS03725 (767484) | 767484..768383 | + | 900 | WP_000817717.1 | DNA-binding transcriptional regulator YqhC | - |
| AOY53_RS03730 (768423) | 768423..769082 | - | 660 | WP_000268419.1 | DedA family general envelope maintenance protein YghB | - |
| AOY53_RS03735 (769222) | 769222..770409 | - | 1188 | WP_001357669.1 | cystathionine beta-lyase | - |
| AOY53_RS03740 (770661) | 770661..771395 | + | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| AOY53_RS03745 (771402) | 771402..771827 | + | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| AOY53_RS03750 (772099) | 772099..772983 | - | 885 | WP_000018760.1 | putative oxidoreductase YghA | VF |
| AOY53_RS03755 (773174) | 773174..773668 | + | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| AOY53_RS03760 (773708) | 773708..774748 | - | 1041 | WP_000262156.1 | L-glyceraldehyde 3-phosphate reductase | - |
| AOY53_RS03765 (774905) | 774905..775792 | + | 888 | WP_001297303.1 | YghX family hydrolase | - |
| AOY53_RS03770 (775911) | 775911..776198 | + | 288 | WP_001059136.1 | DUF2623 family protein YghW | - |
| AOY53_RS03775 (776387) | 776387..777505 | + | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| AOY53_RS03780 (777508) | 777508..778494 | + | 987 | WP_001081870.1 | hydrogenase 2 operon protein HybA | - |
| AOY53_RS03785 (778484) | 778484..779662 | + | 1179 | WP_000017703.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| AOY53_RS03790 (779659) | 779659..781362 | + | 1704 | WP_000083065.1 | hydrogenase 2 large subunit | - |
| AOY53_RS03795 (781362) | 781362..781856 | + | 495 | WP_001221946.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| AOY53_RS03800 (781849) | 781849..782337 | + | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| AOY53_RS03805 (782330) | 782330..782671 | + | 342 | WP_000544953.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| AOY53_RS03810 (782684) | 782684..782932 | + | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| AOY53_RS03815 (783054) | 783054..784034 | - | 981 | WP_000399648.1 | IS110 family transposase IS621 | Transposase |
| AOY53_RS03820 (784334) | 784334..785200 | - | 867 | WP_001298746.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| AOY53_RS03825 (785405) | 785405..787264 | + | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| AOY53_RS03830 (787556) | 787556..789055 | + | 1500 | WP_000933258.1 | inorganic phosphate transporter PitB | - |
| AOY53_RS03835 (789104) | 789104..789796 | - | 693 | WP_001190780.1 | dTMP kinase | - |
| AOY53_RS03840 (789970) | 789970..790683 | + | 714 | WP_001076097.1 | dTMP kinase | - |
| AOY53_RS03845 (790715) | 790715..791473 | + | 759 | WP_000339532.1 | hypothetical protein | - |
| AOY53_RS03850 (791519) | 791519..792868 | + | 1350 | WP_000896880.1 | lipopolysaccharide biosynthesis protein | - |
| AOY53_RS03855 (792868) | 792868..793692 | + | 825 | WP_000984978.1 | hypothetical protein | - |
| AOY53_RS03860 (793704) | 793704..794264 | + | 561 | WP_001299422.1 | YtfJ family protein | - |
| AOY53_RS03865 (794295) | 794295..795365 | + | 1071 | WP_039022612.1 | LPS export ABC transporter permease LptF | - |
| AOY53_RS03870 (795362) | 795362..796441 | + | 1080 | WP_001307395.1 | LPS export ABC transporter permease LptG | - |
| AOY53_RS03875 (796476) | 796476..797648 | - | 1173 | WP_000524972.1 | 8-amino-7-oxononanoate synthase | VF |
| AOY53_RS03880 (797648) | 797648..797896 | - | 249 | WP_000248097.1 | acyl carrier protein | - |
| AOY53_RS03885 (797928) | 797928..798842 | - | 915 | WP_001077177.1 | NAD-dependent epimerase/dehydratase family protein | - |
| AOY53_RS03890 (798839) | 798839..800560 | - | 1722 | WP_001390306.1 | 4-hydroxyphenylalkanoate adenylyltransferase | VF |
| AOY53_RS03895 (800931) | 800931..802073 | + | 1143 | WP_000388786.1 | protein YghO | - |
| AOY53_RS03900 (802080) | 802080..802844 | - | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| AOY53_RS03905 (803095) | 803095..804594 | + | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| AOY53_RS03910 (804594) | 804594..805646 | + | 1053 | WP_000943059.1 | glycolate oxidase subunit GlcE | - |
| AOY53_RS03915 (805657) | 805657..806880 | + | 1224 | WP_001194680.1 | glycolate oxidase subunit GlcF | - |
| AOY53_RS03920 (806885) | 806885..807289 | + | 405 | WP_000853256.1 | GlcG family protein | - |
| AOY53_RS03925 (807311) | 807311..809482 | + | 2172 | WP_000084077.1 | malate synthase G | - |
| AOY53_RS03930 (809838) | 809838..811520 | + | 1683 | WP_000259303.1 | glycolate permease GlcA | - |
| AOY53_RS03935 (812006) | 812006..816574 | + | 4569 | WP_039022611.1 | hypothetical protein | VF |
| AOY53_RS03940 (816714) | 816714..817523 | + | 810 | WP_001365924.1 | Leader peptidase PppA | VF |
| AOY53_RS03945 (817589) | 817589..817999 | + | 411 | WP_001324279.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| AOY53_RS03950 (818017) | 818017..818976 | + | 960 | WP_000135063.1 | Type II secretion system protein C | VF |
| AOY53_RS03955 (819006) | 819006..821066 | + | 2061 | WP_000498829.1 | Type II secretion system protein D | VF |
| AOY53_RS03960 (821066) | 821066..822559 | + | 1494 | WP_000249348.1 | Type II secretion system protein E | VF |
| AOY53_RS03965 (822559) | 822559..823782 | + | 1224 | WP_001173453.1 | Type II secretion system protein F | VF |
| AOY53_RS03970 (823799) | 823799..824254 | + | 456 | WP_001087296.1 | Type II secretion system protein G | VF |
| AOY53_RS03975 (824258) | 824258..824821 | + | 564 | WP_021293025.1 | Type II secretion system protein H | VF |
| AOY53_RS03980 (824818) | 824818..825189 | + | 372 | WP_000820104.1 | Type II secretion system protein I | VF |
| AOY53_RS03985 (825186) | 825186..825785 | + | 600 | WP_039022610.1 | Type II secretion system protein J | VF |
| AOY53_RS03990 (825788) | 825788..826765 | + | 978 | WP_000633238.1 | Putative type II secretion system protein K | VF |
| AOY53_RS03995 (826762) | 826762..827940 | + | 1179 | WP_032283517.1 | Type II secretion system protein L | VF |
| AOY53_RS04000 (827942) | 827942..828478 | + | 537 | WP_000942795.1 | Type II secretion system protein M | VF |
| AOY53_RS04005 (828759) | 828759..829601 | - | 843 | WP_089552761.1 | DUF4942 domain-containing protein | - |
| AOY53_RS04010 (829686) | 829686..829883 | - | 198 | WP_085949090.1 | DUF957 domain-containing protein | - |
| AOY53_RS04015 (829911) | 829911..830108 | - | 198 | Protein_788 | DUF5983 family protein | - |
| AOY53_RS04020 (830105) | 830105..830482 | - | 378 | WP_000854821.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| AOY53_RS04025 (830572) | 830572..830940 | - | 369 | WP_001285610.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| AOY53_RS04030 (831020) | 831020..831241 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| AOY53_RS04035 (831328) | 831328..831804 | - | 477 | WP_040089737.1 | RadC family protein | - |
| AOY53_RS04040 (831820) | 831820..832305 | - | 486 | WP_061157977.1 | antirestriction protein | - |
| AOY53_RS04045 (832397) | 832397..833215 | - | 819 | WP_001610805.1 | DUF932 domain-containing protein | - |
| AOY53_RS04050 (833543) | 833543..836389 | - | 2847 | WP_181674651.1 | Ag43/Cah family autotransporter adhesin | - |
| AOY53_RS04055 (836762) | 836762..837634 | - | 873 | WP_181674650.1 | GTPase family protein | - |
| AOY53_RS04060 (837744) | 837744..838763 | - | 1020 | WP_001308058.1 | hypothetical protein | - |
| AOY53_RS04070 (841158) | 841158..841400 | - | 243 | Protein_799 | IS1 family transposase | - |
| AOY53_RS04075 (842176) | 842176..842748 | - | 573 | WP_001170557.1 | hypothetical protein | - |
| AOY53_RS04080 (842834) | 842834..843040 | - | 207 | WP_000856891.1 | AlpA family transcriptional regulator | - |
| AOY53_RS04085 (843421) | 843421..844212 | - | 792 | WP_181674649.1 | hypothetical protein | - |
| AOY53_RS04090 (845200) | 845200..845412 | + | 213 | WP_047628306.1 | hemolysin expression modulator Hha | - |
| AOY53_RS04095 (845644) | 845644..846243 | + | 600 | WP_085447089.1 | inovirus-type Gp2 protein | - |
| AOY53_RS04100 (846625) | 846625..847008 | + | 384 | WP_040089473.1 | putative zinc ribbon protein | - |
| AOY53_RS04105 (847005) | 847005..847418 | + | 414 | WP_001013765.1 | putative zinc ribbon protein | - |
| AOY53_RS04110 (848022) | 848022..848228 | - | 207 | WP_000730142.1 | P fimbrial regulatory protein KS71A | VF |
| AOY53_RS04115 (848797) | 848797..849096 | + | 300 | WP_001088797.1 | Major pilu subunit operon regulatory protein PapB | VF |
| AOY53_RS04120 (849104) | 849104..849646 | + | 543 | WP_000793780.1 | hypothetical protein | VF |
| AOY53_RS04125 (849703) | 849703..852105 | + | 2403 | WP_240760649.1 | Outer membrane usher protein YraJ | VF |
| AOY53_RS04130 (852098) | 852098..852874 | + | 777 | WP_089638380.1 | Chaperone protein FaeE | VF |
| AOY53_RS04135 (852909) | 852909..853400 | + | 492 | WP_097728789.1 | hypothetical protein | VF |
| AOY53_RS04140 (853639) | 853639..854085 | + | 447 | WP_240760700.1 | K88 fimbrial protein AB | VF |
| AOY53_RS04145 (854067) | 854067..854411 | + | 345 | WP_240760650.1 | hypothetical protein | - |
| AOY53_RS04150 (854639) | 854639..855436 | + | 798 | WP_089638384.1 | hypothetical protein | VF |
| AOY53_RS04155 (855467) | 855467..856231 | + | 765 | WP_069934531.1 | hypothetical protein | VF |
| AOY53_RS04160 (856248) | 856248..857021 | + | 774 | WP_069934530.1 | hypothetical protein | VF |
| AOY53_RS24300 (857021) | 857021..857143 | + | 123 | WP_256112207.1 | hypothetical protein | - |
| AOY53_RS04165 (857095) | 857095..857736 | + | 642 | WP_089638386.1 | hypothetical protein | - |
| AOY53_RS04170 (857726) | 857726..858484 | + | 759 | WP_240760651.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| AOY53_RS04175 (858674) | 858674..859321 | + | 648 | Protein_821 | IS66 family transposase IS679 | Transposase |
| AOY53_RS04180 (859321) | 859321..859668 | + | 348 | WP_000624631.1 | IS66 family transposase ISCro1 | Transposase |
| AOY53_RS04185 (859688) | 859688..861259 | + | 1572 | Protein_823 | IS66 family transposase ISCro1 | Transposase |
| AOY53_RS04190 (861600) | 861600..862484 | + | 885 | WP_181674585.1 | fimbrial | - |
| AOY53_RS04195 (862522) | 862522..866421 | + | 3900 | WP_089638389.1 | Hemoglobin-binding protease hbp autotransporter | VF |
| AOY53_RS04200 (866571) | 866571..867581 | - | 1011 | WP_000109845.1 | sulfite reductase subunit C | - |
| AOY53_RS04205 (867592) | 867592..868410 | - | 819 | WP_089638390.1 | anaerobic sulfite reductase subunit AsrB | - |
| AOY53_RS04210 (868414) | 868414..869457 | - | 1044 | WP_240760652.1 | anaerobic sulfite reductase subunit AsrA | - |
| AOY53_RS04215 (869857) | 869857..870480 | + | 624 | WP_040090646.1 | hypothetical protein | - |
| AOY53_RS04220 (870576) | 870576..870809 | + | 234 | WP_000124171.1 | hypothetical protein | - |
| AOY53_RS04225 (870862) | 870862..871053 | - | 192 | WP_001287884.1 | DUF4222 domain-containing protein | - |
| AOY53_RS04230 (871733) | 871733..872308 | + | 576 | Protein_832 | POTRA domain-containing protein | - |
| AOY53_RS04235 (872306) | 872306..873385 | + | 1080 | WP_235147126.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| AOY53_RS04240 (873395) | 873395..873922 | + | 528 | WP_001243913.1 | Leukotoxin-activating lysine-acyltransferase LtxC | VF |
| AOY53_RS04245 (873938) | 873938..875170 | + | 1233 | Protein_835 | filamentous hemagglutinin N-terminal domain-containing protein | - |
| AOY53_RS04250 (875228) | 875228..875632 | + | 405 | Protein_836 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|