MGE detailed information
MGE type: Prophage MGE length: 76522 bp
Accession: NZ_CP028769 Location: 2282245..2358766 Organism: Escherichia coli strain A5 Replicon: chromosome
Accession: NZ_CP028769 Location: 2282245..2358766 Organism: Escherichia coli strain A5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY56_RS10985 (2278144) | 2278144..2279364 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| AOY56_RS10990 (2279489) | 2279489..2280184 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| AOY56_RS10995 (2280137) | 2280137..2281429 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| AOY56_RS11000 (2281588) | 2281588..2282202 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| AOY56_RS11005 (2282245) | 2282245..2283099 | - | 855 | WP_000526492.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| AOY56_RS11010 (2283101) | 2283101..2283718 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| AOY56_RS11015 (2283729) | 2283729..2286152 | - | 2424 | WP_087599283.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| AOY56_RS11020 (2286213) | 2286213..2288639 | - | 2427 | WP_000041554.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| AOY56_RS11025 (2288838) | 2288838..2289143 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| AOY56_RS11030 (2289251) | 2289251..2289961 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| AOY56_RS11035 (2289964) | 2289964..2290524 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| AOY56_RS11040 (2290559) | 2290559..2290900 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| AOY56_RS11045 (2291035) | 2291035..2291361 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| AOY56_RS11050 (2291567) | 2291567..2292781 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| AOY56_RS11055 (2292793) | 2292793..2293812 | + | 1020 | WP_000836064.1 | Zn-dependent oxidoreductase | - |
| AOY56_RS11060 (2294000) | 2294000..2295280 | - | 1281 | WP_000876979.1 | Putative defective protein IntQ ; Integrase | Integrase |
| AOY56_RS11065 (2295315) | 2295315..2295566 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| AOY56_RS11070 (2295639) | 2295639..2298110 | - | 2472 | WP_033815598.1 | exonuclease | - |
| AOY56_RS11075 (2298204) | 2298204..2298395 | - | 192 | WP_001083280.1 | lysis protein YdfD | - |
| AOY56_RS11080 (2298392) | 2298392..2298580 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| AOY56_RS11085 (2299085) | 2299085..2299405 | + | 321 | WP_122986851.1 | hypothetical protein | - |
| AOY56_RS22860 (2299542) | 2299542..2299643 | - | 102 | Protein_2176 | protein YdfB | - |
| AOY56_RS11095 (2299645) | 2299645..2299800 | - | 156 | WP_000379589.1 | DUF1391 family protein | - |
| AOY56_RS11100 (2299993) | 2299993..2300400 | - | 408 | WP_001003381.1 | helix-turn-helix domain-containing protein | - |
| AOY56_RS11105 (2300478) | 2300478..2300705 | + | 228 | WP_000476993.1 | Cro/CI family transcriptional regulator | - |
| AOY56_RS11110 (2300689) | 2300689..2301210 | + | 522 | WP_000705349.1 | toxin YdaT family protein | - |
| AOY56_RS11115 (2301191) | 2301191..2302156 | + | 966 | WP_000054506.1 | hypothetical protein | - |
| AOY56_RS11120 (2302197) | 2302197..2302616 | + | 420 | WP_001151195.1 | DUF977 family protein | - |
| AOY56_RS11125 (2302671) | 2302671..2303768 | + | 1098 | Protein_2183 | ISNCY family transposase ISCARN112 | Transposase |
| AOY56_RS11130 (2303841) | 2303841..2303990 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| AOY56_RS11135 (2304427) | 2304427..2304759 | - | 333 | WP_001349760.1 | FlxA-like family protein | - |
| AOY56_RS11140 (2304962) | 2304962..2305267 | - | 306 | WP_001326990.1 | protein YdfV | - |
| AOY56_RS11145 (2305292) | 2305292..2305531 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| AOY56_RS11150 (2305531) | 2305531..2305818 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| AOY56_RS11155 (2305890) | 2305890..2306045 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| AOY56_RS11160 (2306262) | 2306262..2306513 | + | 252 | WP_000980994.1 | protein Rem | - |
| AOY56_RS11165 (2306580) | 2306580..2306858 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| AOY56_RS11170 (2306860) | 2306860..2307909 | + | 1050 | WP_063087587.1 | DUF968 domain-containing protein | - |
| AOY56_RS11175 (2307923) | 2307923..2308675 | + | 753 | WP_001047135.1 | antitermination protein | - |
| AOY56_RS11180 (2308953) | 2308953..2309042 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| AOY56_RS11185 (2309097) | 2309097..2309309 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| AOY56_RS11190 (2309610) | 2309610..2309825 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| AOY56_RS11195 (2310189) | 2310189..2310359 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| AOY56_RS11200 (2310579) | 2310579..2310794 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| AOY56_RS11205 (2310799) | 2310799..2311110 | + | 312 | WP_000189915.1 | YdfR family protein | - |
| AOY56_RS11210 (2311107) | 2311107..2311640 | + | 534 | WP_001092971.1 | lysozyme | - |
| AOY56_RS11215 (2311637) | 2311637..2312134 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| AOY56_RS11220 (2312498) | 2312498..2312710 | + | 213 | WP_063087589.1 | cold shock protein CspI | - |
| AOY56_RS11225 (2312721) | 2312721..2312909 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| AOY56_RS11230 (2312912) | 2312912..2312977 | + | 66 | WP_122134696.1 | small protein YnfR | - |
| AOY56_RS11240 (2313383) | 2313383..2313556 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| AOY56_RS11245 (2313708) | 2313708..2314118 | - | 411 | WP_000035577.1 | DUF1398 domain-containing protein | - |
| AOY56_RS11250 (2314419) | 2314419..2314625 | + | 207 | WP_001031431.1 | hypothetical protein | - |
| AOY56_RS11255 (2315198) | 2315198..2315725 | + | 528 | WP_001389340.1 | DUF1441 family protein | - |
| AOY56_RS11260 (2315734) | 2315734..2316723 | + | 990 | Protein_2209 | phage terminase large subunit family protein | - |
| AOY56_RS11265 (2316888) | 2316888..2318126 | + | 1239 | WP_029391963.1 | Prophage integrase IntA ; Integrase | Integrase |
| AOY56_RS11270 (2318139) | 2318139..2318342 | + | 204 | WP_001095275.1 | hypothetical protein | - |
| AOY56_RS11275 (2318401) | 2318401..2318982 | + | 582 | WP_089568290.1 | BRO family protein | - |
| AOY56_RS11280 (2319199) | 2319199..2319642 | - | 444 | WP_050489335.1 | hypothetical protein | - |
| AOY56_RS11285 (2319674) | 2319674..2319868 | - | 195 | WP_050489334.1 | hypothetical protein | - |
| AOY56_RS11290 (2319942) | 2319942..2320217 | + | 276 | Protein_2215 | host cell division inhibitor Icd-like protein | - |
| AOY56_RS11295 (2320204) | 2320204..2320404 | + | 201 | WP_032279725.1 | hypothetical protein | - |
| AOY56_RS11300 (2320410) | 2320410..2320709 | + | 300 | WP_087907452.1 | DUF4222 domain-containing protein | - |
| AOY56_RS11305 (2320706) | 2320706..2322565 | + | 1860 | WP_087907453.1 | primase-like DNA-binding domain-containing protein | - |
| AOY56_RS11310 (2322833) | 2322833..2323078 | + | 246 | WP_087907454.1 | hypothetical protein | - |
| AOY56_RS11315 (2323075) | 2323075..2323497 | + | 423 | WP_087907455.1 | single-stranded DNA-binding protein | - |
| AOY56_RS11320 (2323861) | 2323861..2324034 | - | 174 | WP_001475270.1 | hypothetical protein | - |
| AOY56_RS11325 (2324127) | 2324127..2326040 | + | 1914 | WP_042021406.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| AOY56_RS11330 (2326298) | 2326298..2326783 | + | 486 | WP_000373415.1 | DUF1441 family protein | - |
| AOY56_RS11335 (2326786) | 2326786..2327067 | + | 282 | WP_001504099.1 | hypothetical protein | - |
| AOY56_RS11340 (2327439) | 2327439..2328554 | + | 1116 | Protein_2225 | phage terminase large subunit family protein | - |
| AOY56_RS11345 (2328551) | 2328551..2328763 | + | 213 | WP_001072975.1 | hypothetical protein | - |
| AOY56_RS11350 (2328763) | 2328763..2330271 | + | 1509 | WP_000985945.1 | phage portal protein | - |
| AOY56_RS11355 (2330216) | 2330216..2332243 | + | 2028 | WP_077826727.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| AOY56_RS11360 (2332330) | 2332330..2332653 | + | 324 | WP_001459761.1 | DUF2190 family protein | - |
| AOY56_RS11365 (2332646) | 2332646..2332921 | + | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| AOY56_RS11370 (2332933) | 2332933..2333511 | + | 579 | WP_087907456.1 | phage tail protein | - |
| AOY56_RS11375 (2333508) | 2333508..2333909 | + | 402 | WP_001079419.1 | phage minor tail U family protein | - |
| AOY56_RS11380 (2333920) | 2333920..2334663 | + | 744 | Protein_2233 | phage tail protein | - |
| AOY56_RS11385 (2334724) | 2334724..2335110 | + | 387 | WP_001300035.1 | phage minor tail protein G | - |
| AOY56_RS11390 (2335119) | 2335119..2335448 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| AOY56_RS11395 (2335420) | 2335420..2338485 | + | 3066 | WP_087907457.1 | phage tail tape measure protein | - |
| AOY56_RS11400 (2338485) | 2338485..2338814 | + | 330 | WP_000447248.1 | phage tail protein | - |
| AOY56_RS11405 (2338824) | 2338824..2339522 | + | 699 | WP_047090220.1 | phage minor tail protein L | - |
| AOY56_RS11410 (2339528) | 2339528..2340271 | + | 744 | WP_000140750.1 | Mov34/MPN/PAD-1 family protein | - |
| AOY56_RS11415 (2340169) | 2340169..2340816 | + | 648 | WP_000741589.1 | tail assembly protein | - |
| AOY56_RS11420 (2340877) | 2340877..2344290 | + | 3414 | WP_063087597.1 | host specificity protein J | - |
| AOY56_RS11425 (2344361) | 2344361..2344960 | + | 600 | WP_001233114.1 | Outer membrane protein X | VF |
| AOY56_RS11430 (2345025) | 2345025..2347985 | + | 2961 | WP_240751740.1 | prophage tail fiber N-terminal domain-containing protein | - |
| AOY56_RS11435 (2347985) | 2347985..2348560 | + | 576 | WP_000885616.1 | tail fiber assembly protein | - |
| AOY56_RS11440 (2348658) | 2348658..2349248 | - | 591 | WP_000086514.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| AOY56_RS11445 (2349565) | 2349565..2349798 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| AOY56_RS11450 (2349867) | 2349867..2349980 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| AOY56_RS11455 (2350583) | 2350583..2351866 | + | 1284 | Protein_2248 | MHS family MFS transporter YdfJ | - |
| AOY56_RS11460 (2351955) | 2351955..2353415 | + | 1461 | WP_000527753.1 | mannitol dehydrogenase family protein | - |
| AOY56_RS11465 (2353451) | 2353451..2353654 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| AOY56_RS11470 (2353832) | 2353832..2354518 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| AOY56_RS11475 (2354607) | 2354607..2355353 | - | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| AOY56_RS11480 (2355490) | 2355490..2357535 | + | 2046 | WP_001315525.1 | peptidyl-dipeptidase Dcp | - |
| AOY56_RS11485 (2357580) | 2357580..2358098 | - | 519 | WP_001024810.1 | 2-oxo-tetronate isomerase | - |
| AOY56_RS11490 (2358374) | 2358374..2358766 | + | 393 | WP_000671744.1 | YdeI family stress tolerance OB fold protein | - |
| AOY56_RS11495 (2359021) | 2359021..2359911 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| AOY56_RS11500 (2360026) | 2360026..2360130 | - | 105 | WP_211180496.1 | protein MgtT | - |
| AOY56_RS11505 (2360130) | 2360130..2360225 | - | 96 | WP_000901367.1 | protein MgtS | - |
| AOY56_RS11510 (2360352) | 2360352..2361539 | - | 1188 | WP_001054164.1 | efflux MFS transporter YdeE | - |
| AOY56_RS11515 (2361734) | 2361734..2362633 | + | 900 | WP_000087216.1 | O-acetylserine/cysteine exporter | - |
| AOY56_RS11520 (2362678) | 2362678..2363376 | - | 699 | WP_000577184.1 | GntR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|