MGE detailed information
MGE type: Prophage MGE length: 63669 bp
Accession: NZ_CP028768 Location: 2442734..2506402 Organism: Escherichia coli strain A6 Replicon: chromosome
Accession: NZ_CP028768 Location: 2442734..2506402 Organism: Escherichia coli strain A6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY57_RS11930 (2438631) | 2438631..2439851 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| AOY57_RS11935 (2439976) | 2439976..2440671 | + | 696 | WP_000919226.1 | dethiobiotin synthase | - |
| AOY57_RS11940 (2440624) | 2440624..2441916 | - | 1293 | WP_071527045.1 | voltage-gated ClC-type chloride channel ClcB | - |
| AOY57_RS11945 (2442077) | 2442077..2442691 | - | 615 | WP_000148695.1 | Tat proofreading chaperone DmsD | - |
| AOY57_RS11950 (2442734) | 2442734..2443588 | - | 855 | WP_000526507.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| AOY57_RS11955 (2443590) | 2443590..2444207 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| AOY57_RS11960 (2444218) | 2444218..2446641 | - | 2424 | WP_201478599.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| AOY57_RS11965 (2446702) | 2446702..2449128 | - | 2427 | WP_000041666.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| AOY57_RS11970 (2449327) | 2449327..2449632 | - | 306 | WP_000778146.1 | DUF1161 domain-containing protein | - |
| AOY57_RS11975 (2449740) | 2449740..2450450 | + | 711 | WP_001296084.1 | YnfC family lipoprotein | - |
| AOY57_RS11980 (2450453) | 2450453..2451013 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| AOY57_RS11985 (2451048) | 2451048..2451389 | - | 342 | WP_000705201.1 | DUF1283 family protein | - |
| AOY57_RS11990 (2451524) | 2451524..2451850 | + | 327 | WP_001304355.1 | YnfA family protein | - |
| AOY57_RS11995 (2452057) | 2452057..2453271 | + | 1215 | WP_201478569.1 | starvation-sensing protein RspA | - |
| AOY57_RS12000 (2453283) | 2453283..2454302 | + | 1020 | WP_000836075.1 | Zn-dependent oxidoreductase | - |
| AOY57_RS12005 (2454490) | 2454490..2455785 | - | 1296 | WP_201478568.1 | Putative defective protein IntQ ; Integrase | Integrase |
| AOY57_RS12010 (2455805) | 2455805..2456057 | - | 253 | Protein_2356 | excisionase family protein | - |
| AOY57_RS12015 (2456127) | 2456127..2458542 | - | 2416 | Protein_2357 | 3'-5' exoribonuclease | - |
| AOY57_RS12020 (2458638) | 2458638..2458826 | - | 189 | WP_201478565.1 | DUF1482 family protein | - |
| AOY57_RS12025 (2458823) | 2458823..2459011 | - | 189 | WP_201478564.1 | cell division inhibition protein DicB | - |
| AOY57_RS12030 (2459022) | 2459022..2459876 | - | 855 | WP_201478563.1 | Rha family phage regulatory protein | - |
| AOY57_RS12035 (2460425) | 2460425..2460940 | + | 516 | WP_201478601.1 | hypothetical protein | - |
| AOY57_RS12040 (2461059) | 2461059..2461343 | + | 285 | WP_074464356.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | - |
| AOY57_RS12045 (2461361) | 2461361..2461486 | - | 126 | Protein_2363 | hypothetical protein | - |
| AOY57_RS12050 (2461493) | 2461493..2461717 | - | 225 | WP_201478562.1 | hypothetical protein | - |
| AOY57_RS24870 (2461747) | 2461747..2461875 | - | 129 | WP_274540486.1 | protein YdfB | - |
| AOY57_RS12055 (2461877) | 2461877..2462032 | - | 156 | WP_000379560.1 | DUF1391 family protein | - |
| AOY57_RS12060 (2462324) | 2462324..2462602 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AOY57_RS12065 (2462604) | 2462604..2462795 | - | 192 | WP_201478561.1 | stability determinant | Antitoxin Detail |
| AOY57_RS12070 (2462816) | 2462816..2463187 | - | 372 | WP_201478560.1 | hypothetical protein | - |
| AOY57_RS12075 (2463285) | 2463285..2463587 | + | 303 | WP_109552861.1 | transcriptional regulator | - |
| AOY57_RS12080 (2463584) | 2463584..2464009 | + | 426 | WP_201478559.1 | toxin YdaT family protein | - |
| AOY57_RS12085 (2464080) | 2464080..2465093 | + | 1014 | WP_201478558.1 | DUF1376 domain-containing protein | - |
| AOY57_RS12090 (2465086) | 2465086..2465547 | + | 462 | WP_240726666.1 | replication protein P | - |
| AOY57_RS12095 (2465582) | 2465582..2466292 | + | 711 | WP_201478556.1 | DUF1627 domain-containing protein | - |
| AOY57_RS12100 (2466358) | 2466358..2466612 | + | 255 | WP_240726667.1 | DNA-binding protein | - |
| AOY57_RS12105 (2466609) | 2466609..2466920 | + | 312 | Protein_2376 | DUF4406 domain-containing protein | - |
| AOY57_RS12110 (2466917) | 2466917..2467135 | + | 219 | WP_201478555.1 | DUF4014 family protein | - |
| AOY57_RS12115 (2467137) | 2467137..2467805 | + | 669 | WP_201478554.1 | DUF551 domain-containing protein | - |
| AOY57_RS12120 (2468108) | 2468108..2468263 | + | 156 | WP_000813259.1 | Hok/Gef family protein | - |
| AOY57_RS12125 (2468476) | 2468476..2468655 | + | 180 | WP_000119356.1 | hypothetical protein | - |
| AOY57_RS12130 (2468674) | 2468674..2469159 | + | 486 | WP_201478553.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| AOY57_RS12135 (2469639) | 2469639..2469917 | + | 279 | WP_201478552.1 | hypothetical protein | - |
| AOY57_RS12140 (2469919) | 2469919..2470968 | + | 1050 | WP_201478551.1 | DUF968 domain-containing protein | - |
| AOY57_RS12145 (2470981) | 2470981..2471352 | + | 372 | WP_201478550.1 | RusA family crossover junction endodeoxyribonuclease | - |
| AOY57_RS12150 (2471345) | 2471345..2471728 | + | 384 | WP_001345623.1 | antiterminator Q family protein | - |
| AOY57_RS12155 (2472211) | 2472211..2472774 | + | 564 | WP_201478549.1 | ORF6N domain-containing protein | - |
| AOY57_RS12160 (2473160) | 2473160..2473357 | + | 198 | WP_201478548.1 | TrmB family transcriptional regulator | - |
| AOY57_RS12165 (2473509) | 2473509..2474567 | + | 1059 | WP_201478547.1 | site-specific DNA-methyltransferase | - |
| AOY57_RS12180 (2474997) | 2474997..2475491 | + | 495 | WP_201478546.1 | hypothetical protein | - |
| AOY57_RS12185 (2475753) | 2475753..2476028 | + | 276 | WP_201478545.1 | hypothetical protein | - |
| AOY57_RS12190 (2476201) | 2476201..2476797 | + | 597 | WP_240726646.1 | hypothetical protein | - |
| AOY57_RS12195 (2476739) | 2476739..2477668 | + | 930 | WP_201478544.1 | hypothetical protein | - |
| AOY57_RS12200 (2477670) | 2477670..2477990 | + | 321 | WP_201478543.1 | phage holin, lambda family | - |
| AOY57_RS12205 (2478004) | 2478004..2478471 | + | 468 | WP_240726668.1 | glycoside hydrolase family 104 protein | - |
| AOY57_RS12210 (2478468) | 2478468..2478704 | + | 237 | WP_240726644.1 | hypothetical protein | - |
| AOY57_RS12215 (2478676) | 2478676..2478957 | + | 282 | WP_201478542.1 | hypothetical protein | - |
| AOY57_RS12220 (2478941) | 2478941..2479171 | + | 231 | WP_097458059.1 | hypothetical protein | - |
| AOY57_RS12225 (2479132) | 2479132..2479542 | + | 411 | WP_201479105.1 | hypothetical protein | - |
| AOY57_RS12230 (2479824) | 2479824..2481149 | + | 1326 | WP_201479106.1 | hypothetical protein | - |
| AOY57_RS12235 (2481361) | 2481361..2481987 | + | 627 | WP_240726687.1 | hypothetical protein | - |
| AOY57_RS12240 (2482025) | 2482025..2482789 | - | 765 | WP_201479104.1 | DUF4145 domain-containing protein | - |
| AOY57_RS12245 (2483126) | 2483126..2483839 | + | 714 | WP_201479103.1 | RNA polymerase subunit sigma-70 | - |
| AOY57_RS12250 (2483793) | 2483793..2485766 | + | 1974 | WP_240726669.1 | phage terminase large subunit family protein | - |
| AOY57_RS12255 (2485772) | 2485772..2486023 | + | 252 | WP_187195264.1 | gpW family head-tail joining protein | - |
| AOY57_RS12260 (2486094) | 2486094..2487693 | + | 1600 | Protein_2405 | phage portal protein | - |
| AOY57_RS12265 (2487690) | 2487690..2488552 | + | 863 | Protein_2406 | S49 family peptidase | - |
| AOY57_RS12270 (2488545) | 2488545..2489036 | + | 492 | WP_240726670.1 | hypothetical protein | - |
| AOY57_RS12275 (2489071) | 2489071..2489472 | + | 402 | WP_201478723.1 | head decoration protein | - |
| AOY57_RS12280 (2489530) | 2489530..2490585 | + | 1056 | Protein_2409 | major capsid protein | - |
| AOY57_RS12285 (2490587) | 2490587..2490772 | + | 186 | WP_097458071.1 | hypothetical protein | - |
| AOY57_RS12290 (2490756) | 2490756..2491088 | + | 333 | WP_097458072.1 | hypothetical protein | - |
| AOY57_RS12295 (2491088) | 2491088..2491648 | + | 561 | WP_201478725.1 | phage tail protein | - |
| AOY57_RS12300 (2491662) | 2491662..2491898 | + | 237 | WP_097448620.1 | DUF2635 domain-containing protein | - |
| AOY57_RS12305 (2491895) | 2491895..2493397 | + | 1503 | Protein_2414 | phage tail sheath subtilisin-like domain-containing protein | - |
| AOY57_RS12310 (2493437) | 2493437..2493796 | + | 360 | Protein_2415 | phage tail tube protein | - |
| AOY57_RS12315 (2493796) | 2493796..2494221 | + | 426 | WP_240726671.1 | phage tail assembly protein | - |
| AOY57_RS12320 (2494332) | 2494332..2494487 | + | 156 | WP_240726672.1 | hypothetical protein | - |
| AOY57_RS12325 (2494661) | 2494661..2494873 | + | 213 | WP_240726673.1 | hypothetical protein | - |
| AOY57_RS12330 (2494960) | 2494960..2495370 | + | 411 | WP_240726674.1 | hypothetical protein | - |
| AOY57_RS12335 (2495437) | 2495437..2496105 | + | 669 | WP_240726675.1 | transglycosylase SLT domain-containing protein | - |
| AOY57_RS12340 (2496190) | 2496190..2496897 | + | 708 | WP_240726676.1 | DNA circularization N-terminal domain-containing protein | - |
| AOY57_RS12345 (2497072) | 2497072..2497602 | + | 531 | WP_240726677.1 | hypothetical protein | - |
| AOY57_RS12350 (2497599) | 2497599..2498684 | + | 1086 | Protein_2423 | contractile injection system protein, VgrG/Pvc8 family | - |
| AOY57_RS12355 (2498681) | 2498681..2499260 | + | 580 | Protein_2424 | phage baseplate assembly protein | - |
| AOY57_RS12360 (2499260) | 2499260..2499697 | + | 438 | WP_201478732.1 | phage GP46 family protein | - |
| AOY57_RS12365 (2499752) | 2499752..2499964 | + | 213 | WP_240726678.1 | hypothetical protein | - |
| AOY57_RS24875 (2499969) | 2499969..2500223 | + | 255 | WP_274614103.1 | baseplate J/gp47 family protein | - |
| AOY57_RS12370 (2500217) | 2500217..2500619 | + | 403 | Protein_2428 | baseplate J/gp47 family protein | - |
| AOY57_RS12375 (2500649) | 2500649..2500846 | + | 198 | WP_240726679.1 | hypothetical protein | - |
| AOY57_RS12380 (2500855) | 2500855..2501010 | + | 156 | WP_240726680.1 | hypothetical protein | - |
| AOY57_RS12385 (2501010) | 2501010..2501504 | + | 495 | WP_240726688.1 | DUF2313 domain-containing protein | - |
| AOY57_RS12390 (2501959) | 2501959..2502201 | + | 243 | WP_240726681.1 | hypothetical protein | - |
| AOY57_RS24880 (2503018) | 2503018..2503149 | + | 132 | WP_274614104.1 | hypothetical protein | - |
| AOY57_RS12395 (2503152) | 2503152..2503559 | + | 408 | WP_240726682.1 | hypothetical protein | - |
| AOY57_RS12400 (2503775) | 2503775..2504326 | + | 552 | WP_201478824.1 | tail fiber assembly protein | - |
| AOY57_RS12405 (2504430) | 2504430..2504609 | + | 180 | WP_201478823.1 | hypothetical protein | - |
| AOY57_RS12410 (2505119) | 2505119..2506402 | + | 1284 | Protein_2437 | MHS family MFS transporter YdfJ | - |
| AOY57_RS12415 (2506491) | 2506491..2507951 | + | 1461 | WP_201478822.1 | mannitol dehydrogenase family protein | - |
| AOY57_RS12420 (2507987) | 2507987..2508190 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| AOY57_RS12425 (2508367) | 2508367..2509053 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| AOY57_RS12430 (2509142) | 2509142..2509888 | - | 747 | WP_001296081.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|