MGE detailed information
MGE type: Prophage MGE length: 52352 bp
Accession: NZ_CP028763 Location: 2283407..2335758 Organism: Escherichia coli strain A11 Replicon: chromosome
Accession: NZ_CP028763 Location: 2283407..2335758 Organism: Escherichia coli strain A11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY64_RS10905 (2280782) | 2280782..2283208 | - | 2427 | WP_000041556.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| AOY64_RS10910 (2283407) | 2283407..2283712 | - | 306 | WP_001307224.1 | DUF1161 domain-containing protein | - |
| AOY64_RS10915 (2283820) | 2283820..2284529 | + | 710 | Protein_2140 | YnfC family lipoprotein | - |
| AOY64_RS10920 (2284532) | 2284532..2285092 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| AOY64_RS10925 (2285127) | 2285127..2285468 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| AOY64_RS10930 (2285603) | 2285603..2285929 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| AOY64_RS10935 (2286135) | 2286135..2287349 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| AOY64_RS10940 (2287361) | 2287361..2288380 | + | 1020 | WP_000836059.1 | Zn-dependent oxidoreductase | - |
| AOY64_RS10945 (2288568) | 2288568..2289848 | - | 1281 | WP_000876979.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| AOY64_RS10950 (2289883) | 2289883..2290134 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| AOY64_RS10955 (2290207) | 2290207..2292678 | - | 2472 | WP_087894713.1 | exonuclease | - |
| AOY64_RS10960 (2292772) | 2292772..2292963 | - | 192 | WP_001083280.1 | lysis protein YdfD | - |
| AOY64_RS10965 (2292960) | 2292960..2293148 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| AOY64_RS22945 (2294109) | 2294109..2294210 | - | 102 | Protein_2151 | protein YdfB | - |
| AOY64_RS10975 (2294212) | 2294212..2294367 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| AOY64_RS10980 (2294534) | 2294534..2294941 | - | 408 | WP_021531326.1 | DNA-binding transcriptional dual regulator DicA | - |
| AOY64_RS10985 (2295025) | 2295025..2295255 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| AOY64_RS10990 (2295239) | 2295239..2295760 | + | 522 | WP_021531325.1 | toxin YdaT family protein | - |
| AOY64_RS10995 (2295741) | 2295741..2296706 | + | 966 | WP_123055762.1 | hypothetical protein | - |
| AOY64_RS11000 (2296747) | 2296747..2297166 | + | 420 | Protein_2157 | DUF977 family protein | - |
| AOY64_RS11005 (2297221) | 2297221..2298318 | + | 1098 | Protein_2158 | ISNCY family transposase ISCARN112 | Transposase |
| AOY64_RS11010 (2298391) | 2298391..2298540 | + | 150 | WP_180302674.1 | ISNCY family transposase ISCARN112 | Transposase |
| AOY64_RS11015 (2298977) | 2298977..2299309 | - | 333 | WP_001317460.1 | FlxA-like family protein | - |
| AOY64_RS11020 (2299512) | 2299512..2299817 | - | 306 | WP_071527819.1 | protein YdfV | - |
| AOY64_RS11025 (2299842) | 2299842..2300081 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| AOY64_RS11030 (2300081) | 2300081..2300368 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| AOY64_RS11035 (2300440) | 2300440..2300595 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| AOY64_RS11040 (2300812) | 2300812..2301063 | + | 252 | WP_000980994.1 | protein Rem | - |
| AOY64_RS11045 (2301130) | 2301130..2301408 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| AOY64_RS11050 (2301410) | 2301410..2302459 | + | 1050 | WP_033815601.1 | DUF968 domain-containing protein | - |
| AOY64_RS11055 (2302473) | 2302473..2303225 | + | 753 | WP_001047135.1 | antitermination protein | - |
| AOY64_RS11060 (2303503) | 2303503..2303592 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| AOY64_RS11065 (2303647) | 2303647..2303859 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| AOY64_RS11070 (2304160) | 2304160..2304375 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| AOY64_RS11075 (2304739) | 2304739..2304909 | - | 171 | WP_212739912.1 | YnfU family zinc-binding protein | - |
| AOY64_RS11080 (2305129) | 2305129..2305344 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| AOY64_RS11085 (2305349) | 2305349..2305660 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| AOY64_RS11090 (2305657) | 2305657..2306190 | + | 534 | WP_001092971.1 | lysozyme | - |
| AOY64_RS11095 (2306187) | 2306187..2306684 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| AOY64_RS11100 (2307047) | 2307047..2307259 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| AOY64_RS11105 (2307270) | 2307270..2307458 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| AOY64_RS11110 (2307461) | 2307461..2307526 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| AOY64_RS11115 (2307531) | 2307531..2307761 | + | 231 | WP_000720962.1 | protein YnfN | - |
| AOY64_RS11120 (2307933) | 2307933..2308106 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| AOY64_RS11125 (2308258) | 2308258..2308668 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| AOY64_RS11130 (2308726) | 2308726..2308959 | - | 234 | WP_032140586.1 | YlcI/YnfO family protein | - |
| AOY64_RS11135 (2309348) | 2309348..2309893 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| AOY64_RS11140 (2309868) | 2309868..2311793 | + | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| AOY64_RS11145 (2311790) | 2311790..2311996 | + | 207 | WP_000198149.1 | gpW family protein | - |
| AOY64_RS11150 (2311993) | 2311993..2313592 | + | 1600 | Protein_2187 | phage portal protein | - |
| AOY64_RS11155 (2313573) | 2313573..2314889 | + | 1317 | Protein_2188 | S49 family peptidase | - |
| AOY64_RS11160 (2314899) | 2314899..2315231 | + | 333 | WP_001297109.1 | head decoration protein | - |
| AOY64_RS11165 (2315287) | 2315287..2316312 | + | 1026 | WP_000063280.1 | major capsid protein | - |
| AOY64_RS11170 (2316354) | 2316354..2316752 | + | 399 | WP_000158905.1 | DNA-packaging protein FI | - |
| AOY64_RS11175 (2316764) | 2316764..2317117 | + | 354 | WP_000752979.1 | head-tail joining protein | - |
| AOY64_RS11180 (2317128) | 2317128..2317706 | + | 579 | WP_000975070.1 | phage tail protein | - |
| AOY64_RS11185 (2317703) | 2317703..2318098 | + | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| AOY64_RS11190 (2318106) | 2318106..2318846 | + | 741 | WP_001349920.1 | phage tail protein | - |
| AOY64_RS11195 (2318862) | 2318862..2319284 | + | 423 | WP_000479153.1 | phage minor tail protein G | - |
| AOY64_RS11200 (2319266) | 2319266..2319700 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| AOY64_RS11205 (2319693) | 2319693..2322145 | + | 2453 | Protein_2198 | phage tail tape measure protein | - |
| AOY64_RS11210 (2322142) | 2322142..2322391 | + | 250 | Protein_2199 | phage tail protein | - |
| AOY64_RS11215 (2322484) | 2322484..2323059 | + | 576 | Protein_2200 | phage minor tail protein L | - |
| AOY64_RS11220 (2323130) | 2323130..2323842 | + | 713 | Protein_2201 | NlpC/P60 family protein | - |
| AOY64_RS11225 (2323844) | 2323844..2324369 | + | 526 | Protein_2202 | tail assembly protein | - |
| AOY64_RS11230 (2324613) | 2324613..2324853 | + | 241 | Protein_2203 | tail assembly protein | - |
| AOY64_RS22950 (2324914) | 2324914..2328233 | + | 3320 | Protein_2204 | host specificity protein J | - |
| AOY64_RS11265 (2328300) | 2328300..2328897 | + | 598 | Protein_2205 | hypothetical protein | VF |
| AOY64_RS11270 (2328962) | 2328962..2331876 | + | 2915 | Protein_2206 | phage tail protein | - |
| AOY64_RS11275 (2331876) | 2331876..2332451 | + | 576 | WP_001439069.1 | tail fiber assembly protein | - |
| AOY64_RS11280 (2332549) | 2332549..2333139 | - | 591 | WP_000078178.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| AOY64_RS11285 (2333456) | 2333456..2333689 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| AOY64_RS11290 (2333758) | 2333758..2333871 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| AOY64_RS11295 (2334475) | 2334475..2335758 | + | 1284 | Protein_2211 | MHS family MFS transporter YdfJ | - |
| AOY64_RS11300 (2335847) | 2335847..2337307 | + | 1461 | WP_000527797.1 | mannitol dehydrogenase family protein | - |
| AOY64_RS11305 (2337343) | 2337343..2337546 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| AOY64_RS11310 (2337724) | 2337724..2338410 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| AOY64_RS11315 (2338499) | 2338499..2339245 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|