MGE detailed information
MGE type: Genomic_island MGE length: 20482 bp
Accession: NZ_CP028761 Location: 1048690..1069171 Organism: Escherichia coli strain A13 Replicon: chromosome
Accession: NZ_CP028761 Location: 1048690..1069171 Organism: Escherichia coli strain A13 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY66_RS04910 (1044805) | 1044805..1045230 | - | 426 | WP_001189667.1 | type VI secretion system baseplate subunit TssE | - |
| AOY66_RS04915 (1045235) | 1045235..1046719 | - | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| AOY66_RS04920 (1046742) | 1046742..1047245 | - | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| AOY66_RS04925 (1047951) | 1047951..1048469 | + | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| AOY66_RS04930 (1048690) | 1048690..1050672 | + | 1983 | WP_000053626.1 | Actin cross-linking toxin VgrG1 | VF |
| AOY66_RS04935 (1050779) | 1050779..1051825 | + | 1047 | WP_000571854.1 | DUF2169 domain-containing protein | - |
| AOY66_RS04940 (1051818) | 1051818..1053257 | + | 1440 | WP_000528852.1 | DUF4150 domain-containing protein | - |
| AOY66_RS04945 (1053232) | 1053232..1053522 | + | 291 | WP_000513317.1 | hypothetical protein | - |
| AOY66_RS04950 (1053780) | 1053780..1054544 | + | 765 | Protein_947 | ISAs1 family transposase ISEc1 | Transposase |
| AOY66_RS04955 (1054773) | 1054773..1055276 | + | 504 | WP_000227711.1 | hypothetical protein | - |
| AOY66_RS04960 (1055370) | 1055370..1055858 | + | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| AOY66_RS04965 (1055884) | 1055884..1056078 | + | 195 | Protein_950 | ISAs1 family transposase | - |
| AOY66_RS04970 (1056129) | 1056129..1056899 | - | 771 | WP_001118054.1 | 2-oxoglutaramate amidase | - |
| AOY66_RS04975 (1057080) | 1057080..1057526 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| AOY66_RS04980 (1057569) | 1057569..1060013 | - | 2445 | WP_000973136.1 | Acyl-coenzyme A dehydrogenase | VF |
| AOY66_RS04985 (1060253) | 1060253..1060831 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| AOY66_RS04990 (1061036) | 1061036..1061803 | + | 768 | WP_001298195.1 | class II glutamine amidotransferase | - |
| AOY66_RS04995 (1061774) | 1061774..1062514 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| AOY66_RS05000 (1062826) | 1062826..1063575 | + | 750 | WP_000093934.1 | Murein DD-endopeptidase MepH | VF |
| AOY66_RS05005 (1063751) | 1063751..1064248 | + | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| AOY66_RS05010 (1064368) | 1064368..1066080 | - | 1713 | Protein_959 | Flagellar biosynthesis protein FlhA | VF |
| AOY66_RS05015 (1066052) | 1066052..1066837 | + | 786 | WP_000207543.1 | Chemotaxis protein LafU | VF |
| AOY66_RS05020 (1066908) | 1066908..1067963 | + | 1056 | WP_001226162.1 | DNA polymerase IV | - |
| AOY66_RS05025 (1068015) | 1068015..1068308 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| AOY66_RS05030 (1068311) | 1068311..1068709 | + | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| AOY66_RS05035 (1068719) | 1068719..1069171 | + | 453 | WP_001059897.1 | GNAT family N-acetyltransferase | - |
| AOY66_RS05040 (1069361) | 1069361..1070500 | + | 1140 | WP_000521564.1 | RNA ligase RtcB family protein | - |
| AOY66_RS05045 (1070497) | 1070497..1071111 | + | 615 | WP_000602123.1 | peptide chain release factor H | - |
| AOY66_RS05050 (1071168) | 1071168..1072625 | - | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| AOY66_RS05055 (1072886) | 1072886..1073344 | + | 459 | WP_001291991.1 | xanthine phosphoribosyltransferase | - |
| - (1073940) | 1073940..1074020 | + | 81 | NuclAT_4 | - | - |
| - (1073940) | 1073940..1074020 | + | 81 | NuclAT_4 | - | - |
| - (1073940) | 1073940..1074020 | + | 81 | NuclAT_4 | - | - |
| - (1073940) | 1073940..1074020 | + | 81 | NuclAT_4 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|