MGE detailed information
MGE type: Prophage MGE length: 43842 bp
Accession: NZ_CP028760 Location: 2444278..2488119 Organism: Escherichia coli strain A14 Replicon: chromosome
Accession: NZ_CP028760 Location: 2444278..2488119 Organism: Escherichia coli strain A14 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY67_RS11910 (2440793) | 2440793..2441539 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| AOY67_RS11915 (2441628) | 2441628..2442314 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| AOY67_RS11920 (2442491) | 2442491..2442694 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| AOY67_RS11925 (2442729) | 2442729..2444189 | - | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| AOY67_RS11930 (2444278) | 2444278..2445561 | - | 1284 | Protein_2322 | MHS family MFS transporter YdfJ | - |
| AOY67_RS11935 (2446165) | 2446165..2446278 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| AOY67_RS11940 (2446347) | 2446347..2446580 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| AOY67_RS11945 (2446897) | 2446897..2447487 | + | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| AOY67_RS11950 (2447585) | 2447585..2448160 | - | 576 | WP_000885600.1 | tail fiber assembly protein | - |
| AOY67_RS11955 (2448160) | 2448160..2448372 | - | 213 | Protein_2327 | hypothetical protein | - |
| AOY67_RS11960 (2448459) | 2448459..2448761 | - | 303 | Protein_2328 | hypothetical protein | - |
| AOY67_RS11965 (2448719) | 2448719..2449264 | - | 546 | WP_000453589.1 | DNA-packaging protein | - |
| AOY67_RS11970 (2449653) | 2449653..2449886 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| AOY67_RS11975 (2449944) | 2449944..2450354 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| AOY67_RS11980 (2450506) | 2450506..2450679 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| AOY67_RS11985 (2450851) | 2450851..2451081 | - | 231 | WP_000720962.1 | protein YnfN | - |
| AOY67_RS11990 (2451086) | 2451086..2451151 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| AOY67_RS11995 (2451154) | 2451154..2451342 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| AOY67_RS12000 (2451353) | 2451353..2451565 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| AOY67_RS12005 (2451928) | 2451928..2452425 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| AOY67_RS12010 (2452422) | 2452422..2452955 | - | 534 | WP_001092971.1 | lysozyme | - |
| AOY67_RS12015 (2452952) | 2452952..2453263 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| AOY67_RS12020 (2453268) | 2453268..2453483 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| AOY67_RS12025 (2453703) | 2453703..2453873 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| AOY67_RS12030 (2454237) | 2454237..2454452 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| AOY67_RS12035 (2454753) | 2454753..2454965 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| AOY67_RS12040 (2455020) | 2455020..2455109 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| AOY67_RS12045 (2455387) | 2455387..2456139 | - | 753 | WP_001047135.1 | antitermination protein | - |
| AOY67_RS12050 (2456153) | 2456153..2457202 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| AOY67_RS12055 (2457204) | 2457204..2457482 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| AOY67_RS12060 (2457549) | 2457549..2457800 | - | 252 | WP_000980994.1 | protein Rem | - |
| AOY67_RS12065 (2458017) | 2458017..2458172 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| AOY67_RS12070 (2458244) | 2458244..2458531 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| AOY67_RS12075 (2458531) | 2458531..2458770 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| AOY67_RS12080 (2458795) | 2458795..2459100 | + | 306 | WP_001326990.1 | protein YdfV | - |
| AOY67_RS12085 (2459303) | 2459303..2459635 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| AOY67_RS12090 (2460072) | 2460072..2460221 | - | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| AOY67_RS12095 (2460294) | 2460294..2461364 | - | 1071 | Protein_2355 | ISNCY family transposase ISCARN112 | Transposase |
| AOY67_RS12100 (2462154) | 2462154..2462441 | - | 288 | Protein_2356 | hypothetical protein | - |
| AOY67_RS12105 (2462919) | 2462919..2463408 | - | 490 | Protein_2357 | class I SAM-dependent methyltransferase | - |
| AOY67_RS12110 (2463405) | 2463405..2463656 | - | 252 | Protein_2358 | DUF977 family protein | - |
| AOY67_RS12115 (2463646) | 2463646..2464026 | + | 381 | Protein_2359 | hypothetical protein | - |
| AOY67_RS12120 (2464069) | 2464069..2464887 | - | 819 | WP_000336726.1 | IS3 family transposase ISSd1 | Transposase |
| AOY67_RS12125 (2464972) | 2464972..2466123 | - | 1152 | WP_001254876.1 | IS30 family transposase IS30D | Transposase |
| AOY67_RS12130 (2466120) | 2466120..2466206 | - | 87 | Protein_2362 | IS3 family transposase ISSfl10 | Transposase |
| AOY67_RS12135 (2466188) | 2466188..2466448 | - | 261 | Protein_2363 | IS3 family transposase ISSfl10 | Transposase |
| AOY67_RS12140 (2466511) | 2466511..2468118 | + | 1608 | Protein_2364 | 3'-5' exoribonuclease | - |
| AOY67_RS12145 (2468191) | 2468191..2468442 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| AOY67_RS12150 (2468477) | 2468477..2469757 | + | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| AOY67_RS12155 (2469945) | 2469945..2470964 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| AOY67_RS12160 (2470976) | 2470976..2472190 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| AOY67_RS12165 (2472396) | 2472396..2472722 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| AOY67_RS12170 (2472857) | 2472857..2473198 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| AOY67_RS12175 (2473233) | 2473233..2473793 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| AOY67_RS12180 (2473796) | 2473796..2474506 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| AOY67_RS12185 (2474614) | 2474614..2474919 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| AOY67_RS12190 (2475118) | 2475118..2476530 | + | 1413 | Protein_2374 | molybdopterin-dependent oxidoreductase | - |
| AOY67_RS12195 (2477404) | 2477404..2478393 | - | 990 | WP_024250695.1 | hypothetical protein | - |
| AOY67_RS12200 (2478475) | 2478475..2478966 | - | 492 | WP_000971494.1 | hypothetical protein | - |
| AOY67_RS12205 (2479232) | 2479232..2479990 | - | 759 | WP_000107258.1 | KilA-N domain-containing protein | - |
| AOY67_RS12210 (2480575) | 2480575..2480943 | - | 369 | WP_077473440.1 | hypothetical protein | - |
| AOY67_RS12215 (2481437) | 2481437..2482795 | - | 1359 | WP_240755357.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| AOY67_RS12220 (2483042) | 2483042..2484151 | + | 1110 | WP_201487992.1 | molybdopterin dinucleotide binding domain-containing protein | - |
| AOY67_RS12225 (2484212) | 2484212..2486635 | + | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| AOY67_RS12230 (2486646) | 2486646..2487263 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| AOY67_RS12235 (2487265) | 2487265..2488119 | + | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| AOY67_RS12240 (2488162) | 2488162..2488776 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| AOY67_RS12245 (2488935) | 2488935..2490227 | + | 1293 | WP_071594606.1 | voltage-gated ClC-type chloride channel ClcB | - |
| AOY67_RS12250 (2490180) | 2490180..2490875 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| AOY67_RS12255 (2491000) | 2491000..2492220 | - | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|