MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 125716 bp
Accession: NZ_CP028759 Location: 3385458..3511173 Organism: Escherichia coli strain A15 Replicon: chromosome
Accession: NZ_CP028759 Location: 3385458..3511173 Organism: Escherichia coli strain A15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY68_RS16080 (3381178) | 3381178..3381537 | + | 360 | WP_000472021.1 | putative DNA-binding transcriptional regulator | - |
| AOY68_RS16085 (3381539) | 3381539..3381931 | + | 393 | WP_000826503.1 | putative DNA-binding transcriptional regulator | - |
| AOY68_RS16090 (3381983) | 3381983..3383398 | - | 1416 | WP_000695655.1 | glutamate--tRNA ligase | - |
| AOY68_RS16120 (3384330) | 3384330..3384671 | + | 342 | WP_000201411.1 | FlxA-like family protein | - |
| AOY68_RS16125 (3384662) | 3384662..3385588 | - | 927 | WP_001109794.1 | LysR family transcriptional regulator | - |
| AOY68_RS16130 (3385678) | 3385678..3386676 | + | 999 | WP_000765587.1 | bile acid:sodium symporter family protein | - |
| AOY68_RS16135 (3386673) | 3386673..3386891 | - | 219 | WP_000410201.1 | DUF3820 family protein | - |
| AOY68_RS16140 (3386893) | 3386893..3388908 | - | 2016 | WP_000443665.1 | NAD-dependent DNA ligase LigA | - |
| AOY68_RS16145 (3388979) | 3388979..3389965 | - | 987 | WP_001297862.1 | cell division protein ZipA | - |
| AOY68_RS16150 (3390195) | 3390195..3390956 | + | 762 | WP_000254843.1 | sulfate transporter CysZ | - |
| AOY68_RS16155 (3391141) | 3391141..3392112 | + | 972 | WP_000034402.1 | cysteine synthase A | - |
| AOY68_RS16160 (3392496) | 3392496..3392753 | + | 258 | WP_000487600.1 | phosphocarrier protein Hpr | - |
| AOY68_RS16165 (3392798) | 3392798..3394525 | + | 1728 | WP_000623136.1 | phosphoenolpyruvate-protein phosphotransferase PtsI | - |
| AOY68_RS16170 (3394566) | 3394566..3395075 | + | 510 | WP_000522249.1 | PTS glucose transporter subunit IIA | - |
| AOY68_RS16175 (3395117) | 3395117..3395968 | - | 852 | WP_000096663.1 | pyridoxine/pyridoxal/pyridoxamine kinase | - |
| AOY68_RS16180 (3396073) | 3396073..3396441 | + | 369 | WP_000719943.1 | YfeK family protein | - |
| AOY68_RS16185 (3396444) | 3396444..3397355 | - | 912 | WP_001297645.1 | cysteine synthase B | - |
| AOY68_RS16190 (3397489) | 3397489..3398586 | - | 1098 | WP_000021040.1 | Sulfate/thiosulfate import ATP-binding protein CysA | VF |
| AOY68_RS16195 (3398576) | 3398576..3399451 | - | 876 | WP_000852686.1 | sulfate/thiosulfate ABC transporter permease CysW | - |
| AOY68_RS16200 (3399451) | 3399451..3400284 | - | 834 | WP_000458406.1 | sulfate/thiosulfate ABC transporter permease CysT | - |
| AOY68_RS16205 (3400284) | 3400284..3401300 | - | 1017 | WP_201489190.1 | thiosulfate/sulfate ABC transporter substrate-binding protein CysP | - |
| AOY68_RS16210 (3401458) | 3401458..3402249 | - | 792 | WP_000517431.1 | Oxidoreductase UcpA | VF |
| AOY68_RS16215 (3402378) | 3402378..3403235 | - | 858 | WP_000966468.1 | HTH-type transcriptional regulator MurR | - |
| AOY68_RS16220 (3403399) | 3403399..3404295 | + | 897 | WP_001175648.1 | N-acetylmuramic acid 6-phosphate etherase | - |
| AOY68_RS16225 (3404299) | 3404299..3405723 | + | 1425 | WP_001040482.1 | PTS N-acetylmuramic acid transporter subunit IIBC | - |
| AOY68_RS16230 (3405728) | 3405728..3407032 | + | 1305 | WP_001315775.1 | Protein flp | VF |
| AOY68_RS16235 (3407090) | 3407090..3407989 | - | 900 | WP_001493264.1 | porphyrinogen peroxidase | - |
| AOY68_RS16240 (3408085) | 3408085..3408660 | - | 576 | WP_000838945.1 | RpoE-regulated lipoprotein | - |
| AOY68_RS16245 (3408721) | 3408721..3409170 | - | 450 | WP_000842944.1 | DUF2919 domain-containing protein | - |
| AOY68_RS16250 (3409157) | 3409157..3409582 | - | 426 | WP_000406000.1 | GNAT family acetyltransferase | - |
| AOY68_RS16255 (3409796) | 3409796..3410665 | + | 870 | WP_000102891.1 | N-acetylmuramoyl-L-alanine amidase AmiA | - |
| AOY68_RS16260 (3410669) | 3410669..3411568 | + | 900 | WP_201489189.1 | oxygen-dependent coproporphyrinogen oxidase | - |
| AOY68_RS16265 (3411574) | 3411574..3412626 | - | 1053 | WP_000753700.1 | HTH-type transcriptional regulator EutR | - |
| AOY68_RS16270 (3412672) | 3412672..3413172 | - | 501 | WP_000606257.1 | ethanolamine utilization microcompartment protein EutK | - |
| AOY68_RS16275 (3413185) | 3413185..3413844 | - | 660 | WP_001111038.1 | ethanolamine utilization microcompartment protein EutL | - |
| AOY68_RS16280 (3413854) | 3413854..3414741 | - | 888 | WP_000372374.1 | ethanolamine ammonia-lyase subunit beta | - |
| AOY68_RS16285 (3414762) | 3414762..3416123 | - | 1362 | WP_000769961.1 | ethanolamine ammonia-lyase subunit alpha | - |
| AOY68_RS16290 (3416135) | 3416135..3417538 | - | 1404 | WP_001097452.1 | ethanolamine ammonia-lyase reactivating factor EutA | - |
| AOY68_RS16295 (3417535) | 3417535..3418761 | - | 1227 | WP_000512372.1 | ethanolamine utilization protein EutH | - |
| AOY68_RS16300 (3418878) | 3418878..3420065 | - | 1188 | WP_001307935.1 | NAD-dependent methanol dehydrogenase | VF |
| AOY68_RS16305 (3420055) | 3420055..3420891 | - | 837 | WP_000929729.1 | ethanolamine utilization protein EutJ | - |
| AOY68_RS16310 (3420902) | 3420902..3422305 | - | 1404 | WP_001075711.1 | Aldehyde-alcohol dehydrogenase | VF |
| AOY68_RS16315 (3422317) | 3422317..3422604 | - | 288 | WP_000762196.1 | ethanolamine utilization microcompartment protein EutN | - |
| AOY68_RS16320 (3422711) | 3422711..3423004 | - | 294 | WP_000387713.1 | ethanolamine utilization microcompartment protein EutM | - |
| AOY68_RS16325 (3423043) | 3423043..3424059 | - | 1017 | WP_000582977.1 | phosphate acetyltransferase | - |
| AOY68_RS16330 (3424056) | 3424056..3424859 | - | 804 | WP_000651298.1 | ethanolamine utilization cob(I)yrinic acid a,c-diamide adenosyltransferase EutT | - |
| AOY68_RS16335 (3424856) | 3424856..3425557 | - | 702 | WP_000733903.1 | ethanolamine utilization acetate kinase EutQ | - |
| AOY68_RS16340 (3425532) | 3425532..3426011 | - | 480 | WP_000820764.1 | ethanolamine utilization acetate kinase EutP | - |
| AOY68_RS16345 (3426024) | 3426024..3426359 | - | 336 | WP_000356956.1 | ethanolamine utilization microcompartment protein EutS | - |
| AOY68_RS16350 (3426652) | 3426652..3428931 | - | 2280 | WP_000342642.1 | NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase | - |
| AOY68_RS16355 (3429220) | 3429220..3430170 | + | 951 | WP_001003709.1 | transaldolase | - |
| AOY68_RS16360 (3430190) | 3430190..3432193 | + | 2004 | WP_000087298.1 | transketolase | - |
| AOY68_RS16365 (3432289) | 3432289..3433332 | - | 1044 | WP_001270524.1 | DUF1176 domain-containing protein | - |
| AOY68_RS16370 (3433458) | 3433458..3434033 | - | 576 | WP_001299058.1 | GDP-mannose pyrophosphatase NudK | - |
| AOY68_RS16375 (3434101) | 3434101..3436080 | - | 1980 | WP_001078871.1 | formate-dependent uric acid utilization protein AegA | - |
| AOY68_RS16380 (3436286) | 3436286..3437986 | + | 1701 | WP_000636129.1 | nitrate/nitrite two-component system sensor histidine kinase NarQ | - |
| AOY68_RS16385 (3438150) | 3438150..3441263 | + | 3114 | WP_001273136.1 | Multidrug efflux pump subunit AcrB | VF |
| AOY68_RS16390 (3441362) | 3441362..3441421 | - | 60 | WP_001386977.1 | protein YpfM | - |
| AOY68_RS16395 (3441802) | 3441802..3442158 | + | 357 | WP_000258247.1 | ArsC family reductase | - |
| AOY68_RS16400 (3442162) | 3442162..3443289 | + | 1128 | WP_001277809.1 | succinyl-diaminopimelate desuccinylase | - |
| AOY68_RS16405 (3443317) | 3443317..3443517 | + | 201 | WP_000383836.1 | YpfN family protein | - |
| AOY68_RS16410 (3443627) | 3443627..3444325 | - | 699 | WP_000679823.1 | esterase | - |
| AOY68_RS16415 (3444399) | 3444399..3446414 | - | 2016 | WP_032197281.1 | tRNA cytosine(34) acetyltransferase TmcA | - |
| AOY68_RS16420 (3446429) | 3446429..3447292 | - | 864 | WP_001267498.1 | neutral zinc metallopeptidase | - |
| AOY68_RS16425 (3447439) | 3447439..3447837 | - | 399 | WP_000911330.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| AOY68_RS16430 (3447837) | 3447837..3448064 | - | 228 | WP_000450524.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| AOY68_RS16435 (3448218) | 3448218..3448931 | - | 714 | WP_001295467.1 | phosphoribosylaminoimidazolesuccinocarboxamide synthase | - |
| AOY68_RS16440 (3449144) | 3449144..3450178 | - | 1035 | WP_001297320.1 | outer membrane protein assembly factor BamC | - |
| AOY68_RS16445 (3450195) | 3450195..3451073 | - | 879 | WP_001295469.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| AOY68_RS16450 (3451219) | 3451219..3451791 | + | 573 | WP_000176187.1 | glycine cleavage system transcriptional repressor | - |
| AOY68_RS16455 (3451791) | 3451791..3452261 | + | 471 | WP_001068682.1 | thioredoxin-dependent thiol peroxidase | - |
| AOY68_RS16460 (3452514) | 3452514..3453131 | + | 618 | WP_001295470.1 | hydrogenase 4 subunit HyfA | - |
| AOY68_RS16465 (3453380) | 3453380..3455148 | + | 1769 | Protein_3207 | hydrogenase 4 subunit B | - |
| AOY68_RS16470 (3455159) | 3455159..3456106 | + | 948 | WP_001299052.1 | hydrogenase 4 subunit HyfC | - |
| AOY68_RS16475 (3456123) | 3456123..3457353 | + | 1231 | Protein_3209 | hydrogenase 4 subunit D | - |
| AOY68_RS16480 (3457365) | 3457365..3458015 | + | 651 | WP_000147987.1 | hydrogenase 4 membrane subunit | - |
| AOY68_RS16485 (3458020) | 3458020..3459606 | + | 1587 | Protein_3211 | hydrogenase 4 subunit F | - |
| AOY68_RS16490 (3459596) | 3459596..3461311 | + | 1716 | WP_001102303.1 | hydrogenase 4 catalytic subunit HyfG | - |
| AOY68_RS16495 (3461321) | 3461321..3461866 | + | 546 | WP_137543520.1 | hydrogenase 4 subunit H | - |
| AOY68_RS16500 (3461863) | 3461863..3462621 | + | 759 | WP_000075542.1 | hydrogenase 4 catalytic subunit HyfI | - |
| AOY68_RS16505 (3462614) | 3462614..3463027 | + | 414 | WP_000796789.1 | hydrogenase 4 assembly chaperone HyfJ | - |
| AOY68_RS16510 (3463057) | 3463057..3465069 | + | 2013 | WP_001251502.1 | DNA-binding transcriptional activator HyfR | VF |
| AOY68_RS16515 (3465091) | 3465091..3465938 | + | 848 | Protein_3217 | formate transporter FocB | - |
| AOY68_RS16520 (3465976) | 3465976..3467037 | - | 1062 | WP_000892044.1 | AI-2E family transporter | - |
| AOY68_RS16525 (3467250) | 3467250..3468713 | + | 1464 | WP_000489667.1 | beta-barrel assembly-enhancing protease | - |
| AOY68_RS16530 (3468734) | 3468734..3469093 | + | 360 | WP_000166449.1 | arsenate reductase (glutaredoxin) | - |
| AOY68_RS16535 (3469231) | 3469231..3469932 | - | 702 | WP_001307333.1 | DnaA inactivator Hda | - |
| AOY68_RS16540 (3470027) | 3470027..3471316 | - | 1290 | WP_000198328.1 | uracil permease | - |
| AOY68_RS16545 (3471402) | 3471402..3472028 | - | 627 | WP_001295473.1 | uracil phosphoribosyltransferase | - |
| AOY68_RS16550 (3472353) | 3472353..3473390 | + | 1038 | WP_001295474.1 | Phosphoribosylformylglycinamidine cyclo-ligase | VF |
| AOY68_RS16555 (3473390) | 3473390..3474028 | + | 639 | WP_001028614.1 | phosphoribosylglycinamide formyltransferase | - |
| AOY68_RS16560 (3474199) | 3474199..3476265 | + | 2067 | WP_000529576.1 | polyphosphate kinase 1 | - |
| AOY68_RS16565 (3476270) | 3476270..3477811 | + | 1542 | WP_001121363.1 | exopolyphosphatase | - |
| AOY68_RS16570 (3477850) | 3477850..3480093 | - | 2244 | WP_000772775.1 | Cyclic di-GMP phosphodiesterase PdeF | VF |
| AOY68_RS16575 (3480275) | 3480275..3480427 | - | 153 | WP_000017552.1 | hypothetical protein | - |
| AOY68_RS16580 (3480445) | 3480445..3480636 | + | 192 | WP_000076001.1 | YfgG family protein | - |
| AOY68_RS16585 (3480947) | 3480947..3481465 | + | 519 | WP_001295476.1 | glycine zipper 2TM domain-containing protein | - |
| AOY68_RS16590 (3481481) | 3481481..3482020 | + | 540 | WP_000755179.1 | DUF5384 family protein | - |
| AOY68_RS16595 (3482213) | 3482213..3482503 | - | 291 | WP_053064297.1 | hypothetical protein | - |
| AOY68_RS16600 (3482564) | 3482564..3485479 | - | 2916 | WP_097420050.1 | cold shock domain-containing protein | - |
| AOY68_RS16605 (3486336) | 3486336..3486545 | + | 210 | WP_000101767.1 | TraC family protein | - |
| AOY68_RS16610 (3486548) | 3486548..3486772 | + | 225 | WP_097420052.1 | hypothetical protein | - |
| AOY68_RS16615 (3487041) | 3487041..3487832 | + | 792 | WP_137543519.1 | P-type conjugative transfer protein TrbJ | - |
| AOY68_RS16620 (3487835) | 3487835..3488017 | + | 183 | WP_097420054.1 | hypothetical protein | - |
| AOY68_RS16625 (3488020) | 3488020..3489663 | + | 1644 | WP_097420056.1 | P-type conjugative transfer protein TrbL | - |
| AOY68_RS16630 (3489666) | 3489666..3489992 | + | 327 | WP_097420057.1 | hypothetical protein | - |
| AOY68_RS16635 (3490600) | 3490600..3491583 | - | 984 | WP_097420059.1 | replication protein C, IncQ-type | - |
| AOY68_RS16640 (3491564) | 3491564..3492466 | - | 903 | WP_036943915.1 | helicase RepA family protein | - |
| AOY68_RS16645 (3492476) | 3492476..3492706 | - | 231 | WP_137543518.1 | AlpA family phage regulatory protein | - |
| AOY68_RS16650 (3492992) | 3492992..3494200 | - | 1209 | WP_016941853.1 | Prophage integrase IntA ; Integrase | Integrase |
| AOY68_RS16655 (3494509) | 3494509..3496086 | - | 1578 | WP_000138282.1 | glutamine-hydrolyzing GMP synthase | - |
| AOY68_RS16660 (3496155) | 3496155..3497621 | - | 1467 | WP_001299507.1 | IMP dehydrogenase | - |
| AOY68_RS16665 (3497783) | 3497783..3499153 | + | 1371 | WP_000937933.1 | exodeoxyribonuclease VII large subunit | - |
| AOY68_RS16670 (3499150) | 3499150..3499365 | - | 216 | WP_001297332.1 | zinc ribbon domain-containing protein | - |
| AOY68_RS16675 (3499434) | 3499434..3500906 | - | 1473 | WP_000249410.1 | ribosome biogenesis GTPase Der | - |
| AOY68_RS16680 (3501024) | 3501024..3502202 | - | 1179 | WP_001177043.1 | outer membrane protein assembly factor BamB | - |
| AOY68_RS16685 (3502213) | 3502213..3502833 | - | 621 | WP_000409205.1 | ancillary SecYEG translocon subunit YfgM | - |
| AOY68_RS16690 (3502851) | 3502851..3504125 | - | 1275 | WP_001107180.1 | histidine--tRNA ligase | - |
| AOY68_RS16695 (3504236) | 3504236..3505354 | - | 1119 | WP_096152044.1 | flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | - |
| AOY68_RS16700 (3505381) | 3505381..3506394 | - | 1014 | WP_001090850.1 | cytoskeleton protein RodZ | - |
| AOY68_RS16705 (3506679) | 3506679..3507833 | - | 1155 | WP_000003317.1 | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | - |
| AOY68_RS16710 (3507983) | 3507983..3508414 | - | 432 | WP_000963837.1 | nucleoside-diphosphate kinase | - |
| AOY68_RS16715 (3508563) | 3508563..3510875 | - | 2313 | WP_001137682.1 | peptidoglycan glycosyltransferase PbpC | - |
| AOY68_RS16720 (3510876) | 3510876..3515837 | - | 4962 | WP_000736321.1 | alpha2-macroglobulin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|