MGE detailed information
MGE type: Genomic_island MGE length: 22991 bp
Accession: NZ_CP028758 Location: 1019586..1042576 Organism: Escherichia coli strain A16 Replicon: chromosome
Accession: NZ_CP028758 Location: 1019586..1042576 Organism: Escherichia coli strain A16 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY69_RS04715 (1015706) | 1015706..1016131 | - | 426 | WP_001189668.1 | type VI secretion system baseplate subunit TssE | - |
| AOY69_RS04720 (1016136) | 1016136..1017620 | - | 1485 | WP_000111581.1 | type VI secretion system contractile sheath large subunit | - |
| AOY69_RS04725 (1017643) | 1017643..1018146 | - | 504 | WP_000041479.1 | type VI secretion system contractile sheath small subunit | - |
| AOY69_RS04730 (1018847) | 1018847..1019365 | + | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| AOY69_RS04735 (1019586) | 1019586..1021574 | + | 1989 | WP_175087234.1 | Actin cross-linking toxin VgrG1 | VF |
| AOY69_RS04740 (1021574) | 1021574..1022116 | + | 543 | WP_000588837.1 | DUF6484 domain-containing protein | - |
| AOY69_RS04745 (1022129) | 1022129..1023271 | + | 1143 | WP_000402251.1 | hypothetical protein | VF |
| AOY69_RS04750 (1023277) | 1023277..1024290 | + | 1014 | WP_023307616.1 | hypothetical protein | - |
| AOY69_RS04755 (1024295) | 1024295..1025488 | + | 1194 | WP_023307617.1 | hypothetical protein | VF |
| AOY69_RS04760 (1025549) | 1025549..1025998 | + | 450 | WP_001281778.1 | hypothetical protein | - |
| AOY69_RS04765 (1026166) | 1026166..1027809 | + | 1644 | WP_044189047.1 | DUF4150 domain-containing protein | - |
| AOY69_RS04770 (1027817) | 1027817..1028845 | + | 1029 | WP_000704551.1 | hypothetical protein | - |
| AOY69_RS04775 (1028847) | 1028847..1030082 | + | 1236 | WP_001016485.1 | hypothetical protein | - |
| AOY69_RS04780 (1030094) | 1030094..1030507 | + | 414 | WP_000642143.1 | thioredoxin domain-containing protein | - |
| AOY69_RS04785 (1030932) | 1030932..1031429 | + | 498 | WP_086217959.1 | hypothetical protein | - |
| AOY69_RS04790 (1031573) | 1031573..1031962 | + | 390 | WP_001382844.1 | integrating conjugative element protein | - |
| AOY69_RS04795 (1032303) | 1032303..1033439 | + | 1137 | Protein_917 | ISAs1 family transposase ISEc1 | Transposase |
| AOY69_RS04800 (1033488) | 1033488..1033712 | + | 225 | WP_201479776.1 | hypothetical protein | - |
| AOY69_RS04805 (1033861) | 1033861..1034631 | - | 771 | WP_119458168.1 | 2-oxoglutaramate amidase | - |
| AOY69_RS04810 (1034812) | 1034812..1035258 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| AOY69_RS04815 (1035301) | 1035301..1037745 | - | 2445 | WP_089618917.1 | Acyl-coenzyme A dehydrogenase | VF |
| AOY69_RS04820 (1037985) | 1037985..1038563 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| AOY69_RS04825 (1038769) | 1038769..1039536 | + | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| AOY69_RS04830 (1039507) | 1039507..1040247 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| AOY69_RS04835 (1040403) | 1040403..1040681 | - | 279 | WP_000615980.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| AOY69_RS04840 (1040684) | 1040684..1040944 | - | 261 | WP_000729709.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| AOY69_RS04845 (1041130) | 1041130..1041903 | + | 774 | WP_123007404.1 | Murein DD-endopeptidase MepH | VF |
| AOY69_RS04850 (1042079) | 1042079..1042576 | + | 498 | WP_086217930.1 | REP-associated tyrosine transposase RayT | - |
| AOY69_RS04855 (1042769) | 1042769..1044481 | - | 1713 | Protein_929 | flagellar biosynthesis protein FlhA | - |
| AOY69_RS04860 (1044453) | 1044453..1045238 | + | 786 | WP_086217936.1 | putative lateral flagellar export/assembly protein LafU | - |
| AOY69_RS04865 (1045309) | 1045309..1046364 | + | 1056 | WP_001226174.1 | DNA polymerase IV | - |
| AOY69_RS04870 (1046361) | 1046361..1046813 | + | 453 | WP_021556480.1 | GNAT family N-acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|