MGE detailed information
MGE type: Genomic_island MGE length: 20681 bp
Accession: NZ_CP028751 Location: 1225824..1246504 Organism: Escherichia coli strain A24 Replicon: chromosome
Accession: NZ_CP028751 Location: 1225824..1246504 Organism: Escherichia coli strain A24 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY77_RS05945 (1221940) | 1221940..1222365 | - | 426 | WP_001189667.1 | type VI secretion system baseplate subunit TssE | - |
| AOY77_RS05950 (1222370) | 1222370..1223854 | - | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| AOY77_RS05955 (1223877) | 1223877..1224380 | - | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| AOY77_RS05960 (1225085) | 1225085..1225603 | + | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| AOY77_RS05965 (1225824) | 1225824..1227806 | + | 1983 | WP_000053627.1 | hypothetical protein | VF |
| AOY77_RS05970 (1227913) | 1227913..1230390 | + | 2478 | WP_240775451.1 | DUF2169 domain-containing protein | - |
| AOY77_RS05975 (1230365) | 1230365..1230655 | + | 291 | WP_000513317.1 | hypothetical protein | - |
| AOY77_RS05980 (1230913) | 1230913..1231677 | + | 765 | Protein_1150 | ISAs1 family transposase | - |
| AOY77_RS05985 (1231906) | 1231906..1232409 | + | 504 | WP_000227712.1 | hypothetical protein | - |
| AOY77_RS05990 (1232503) | 1232503..1232991 | + | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| AOY77_RS05995 (1233017) | 1233017..1233211 | + | 195 | Protein_1153 | ISAs1 family transposase | - |
| AOY77_RS06000 (1233262) | 1233262..1234032 | - | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| AOY77_RS06005 (1234213) | 1234213..1234659 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| AOY77_RS06010 (1234702) | 1234702..1237146 | - | 2445 | WP_201472176.1 | hypothetical protein | VF |
| AOY77_RS06015 (1237386) | 1237386..1237964 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| AOY77_RS06020 (1238169) | 1238169..1238936 | + | 768 | WP_001298195.1 | class II glutamine amidotransferase | - |
| AOY77_RS06025 (1238907) | 1238907..1239647 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| AOY77_RS06030 (1239959) | 1239959..1240708 | + | 750 | WP_000093934.1 | hypothetical protein | VF |
| AOY77_RS06035 (1240884) | 1240884..1241381 | + | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| AOY77_RS06040 (1241464) | 1241464..1241673 | - | 210 | WP_011579064.1 | hypothetical protein | - |
| AOY77_RS06045 (1241701) | 1241701..1243413 | - | 1713 | Protein_1163 | hypothetical protein | VF |
| AOY77_RS06050 (1243385) | 1243385..1244170 | + | 786 | WP_000207578.1 | hypothetical protein | VF |
| AOY77_RS06055 (1244241) | 1244241..1245296 | + | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| AOY77_RS06060 (1245348) | 1245348..1245641 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| AOY77_RS06065 (1245644) | 1245644..1246042 | + | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| AOY77_RS06070 (1246052) | 1246052..1246504 | + | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| AOY77_RS06075 (1246694) | 1246694..1247833 | + | 1140 | WP_000521561.1 | RNA ligase RtcB family protein | - |
| AOY77_RS06080 (1247830) | 1247830..1248444 | + | 615 | WP_000602124.1 | peptide chain release factor H | - |
| AOY77_RS06085 (1248501) | 1248501..1249958 | - | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| AOY77_RS06090 (1250219) | 1250219..1250677 | + | 459 | WP_001291991.1 | xanthine phosphoribosyltransferase | - |
| - (1251273) | 1251273..1251353 | + | 81 | NuclAT_4 | - | - |
| - (1251273) | 1251273..1251353 | + | 81 | NuclAT_4 | - | - |
| - (1251273) | 1251273..1251353 | + | 81 | NuclAT_4 | - | - |
| - (1251273) | 1251273..1251353 | + | 81 | NuclAT_4 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|