MGE detailed information
MGE type: Genomic_island MGE length: 46786 bp
Accession: NZ_CP028745 Location: 4511107..4557892 Organism: Escherichia coli strain A30 Replicon: chromosome
Accession: NZ_CP028745 Location: 4511107..4557892 Organism: Escherichia coli strain A30 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY83_RS21350 (4506510) | 4506510..4509902 | - | 3393 | WP_240767501.1 | ImcF-related family protein | - |
| AOY83_RS21355 (4509914) | 4509914..4510969 | - | 1056 | WP_240767502.1 | hypothetical protein | - |
| AOY83_RS21360 (4511107) | 4511107..4511364 | - | 258 | WP_240767503.1 | hypothetical protein | VF |
| AOY83_RS21365 (4511491) | 4511491..4512486 | - | 996 | WP_240767504.1 | SUMF1/EgtB/PvdO family nonheme iron enzyme | - |
| AOY83_RS21370 (4512573) | 4512573..4513559 | - | 987 | WP_240767505.1 | Serine/threonine-protein kinase pkn1 | VF |
| AOY83_RS21375 (4513570) | 4513570..4515897 | - | 2328 | WP_240767506.1 | ATPase | - |
| AOY83_RS21380 (4515911) | 4515911..4518433 | - | 2523 | WP_240767507.1 | Actin cross-linking toxin VgrG1 | VF |
| AOY83_RS21385 (4518420) | 4518420..4518962 | - | 543 | WP_240767508.1 | type VI secretion protein | - |
| AOY83_RS21390 (4518956) | 4518956..4519522 | - | 567 | WP_158181162.1 | type IV secretion protein Rhs | - |
| AOY83_RS21395 (4519519) | 4519519..4522179 | - | 2661 | WP_240767509.1 | Protein ClpV1 | VF |
| AOY83_RS21400 (4522342) | 4522342..4522677 | - | 336 | WP_240767510.1 | type II toxin-antitoxin system YoeB family toxin | - |
| AOY83_RS21405 (4522811) | 4522811..4523302 | - | 492 | WP_119187652.1 | Major exported protein | VF |
| AOY83_RS21410 (4523308) | 4523308..4525038 | - | 1731 | WP_240767511.1 | Outer membrane porin F | VF |
| AOY83_RS21415 (4525041) | 4525041..4525694 | - | 654 | WP_240767512.1 | hypothetical protein | VF |
| AOY83_RS21420 (4525691) | 4525691..4527028 | - | 1338 | WP_240767513.1 | hypothetical protein | VF |
| AOY83_RS21425 (4527044) | 4527044..4528588 | - | 1545 | WP_240767514.1 | hypothetical protein | VF |
| AOY83_RS21430 (4528610) | 4528610..4529107 | - | 498 | WP_240767515.1 | hypothetical protein | VF |
| AOY83_RS21435 (4529614) | 4529614..4529823 | + | 210 | WP_075826339.1 | DUF4222 domain-containing protein | - |
| AOY83_RS21440 (4529843) | 4529843..4530076 | - | 234 | WP_240767516.1 | hypothetical protein | - |
| AOY83_RS21445 (4530172) | 4530172..4530795 | - | 624 | WP_240767517.1 | DNA-binding protein | - |
| AOY83_RS21450 (4530916) | 4530916..4531098 | - | 183 | WP_001424023.1 | hypothetical protein | - |
| AOY83_RS21455 (4531104) | 4531104..4531517 | - | 414 | WP_089570383.1 | putative zinc ribbon protein | - |
| AOY83_RS21460 (4531514) | 4531514..4531897 | - | 384 | WP_157709417.1 | putative zinc ribbon protein | - |
| AOY83_RS21465 (4532158) | 4532158..4532727 | - | 570 | WP_049592764.1 | inovirus Gp2 family protein | - |
| AOY83_RS21470 (4533430) | 4533430..4533642 | - | 213 | WP_240767518.1 | hemolysin expression modulator Hha | - |
| AOY83_RS21475 (4534356) | 4534356..4534562 | + | 207 | WP_001095911.1 | AlpA family transcriptional regulator | - |
| AOY83_RS21480 (4534650) | 4534650..4535258 | + | 609 | WP_240767519.1 | hypothetical protein | - |
| AOY83_RS21485 (4536688) | 4536688..4537710 | + | 1023 | WP_240767520.1 | hypothetical protein | - |
| AOY83_RS21490 (4537794) | 4537794..4538666 | + | 873 | WP_240767521.1 | GTPase family protein | - |
| AOY83_RS21495 (4539038) | 4539038..4541887 | + | 2850 | WP_240767522.1 | calcium-binding autotransporter Cah | - |
| AOY83_RS21500 (4542215) | 4542215..4543033 | + | 819 | WP_097308925.1 | DUF932 domain-containing protein | - |
| AOY83_RS21505 (4543125) | 4543125..4543610 | + | 486 | WP_097308924.1 | antirestriction protein | - |
| AOY83_RS21510 (4543626) | 4543626..4544102 | + | 477 | WP_001186727.1 | RadC family protein | - |
| AOY83_RS21515 (4544165) | 4544165..4544386 | + | 222 | WP_000692329.1 | DUF987 domain-containing protein | - |
| AOY83_RS21520 (4544549) | 4544549..4544923 | + | 375 | WP_047659145.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| AOY83_RS21525 (4544970) | 4544970..4545347 | + | 378 | WP_000854907.1 | TA system toxin CbtA family protein | Toxin Detail |
| AOY83_RS21530 (4545344) | 4545344..4545832 | + | 489 | WP_240767523.1 | DUF5983 family protein | - |
| AOY83_RS21535 (4545849) | 4545849..4546052 | + | 204 | WP_240767524.1 | hypothetical protein | - |
| AOY83_RS21540 (4546137) | 4546137..4547001 | + | 865 | Protein_4233 | DUF4942 domain-containing protein | - |
| AOY83_RS21545 (4547073) | 4547073..4547336 | + | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| AOY83_RS21550 (4547333) | 4547333..4547659 | + | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AOY83_RS21555 (4548541) | 4548541..4550079 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| AOY83_RS21560 (4550445) | 4550445..4551779 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| AOY83_RS21565 (4551859) | 4551859..4554006 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| AOY83_RS21570 (4554065) | 4554065..4555522 | + | 1458 | WP_032318694.1 | dipeptide/tripeptide permease DtpC | - |
| AOY83_RS21575 (4555759) | 4555759..4557276 | + | 1518 | WP_001295087.1 | lysine--tRNA ligase | - |
| AOY83_RS21580 (4557395) | 4557395..4557568 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| AOY83_RS21585 (4557596) | 4557596..4557892 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| AOY83_RS21590 (4558119) | 4558119..4558391 | - | 273 | WP_096840330.1 | GNAT family N-acetyltransferase | - |
| AOY83_RS21595 (4558403) | 4558403..4558633 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| AOY83_RS21600 (4558814) | 4558814..4560445 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| AOY83_RS21605 (4560442) | 4560442..4561161 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|