MGE detailed information
MGE type: Genomic_island MGE length: 73036 bp
Accession: NZ_CP028745 Location: 3835766..3908801 Organism: Escherichia coli strain A30 Replicon: chromosome
Accession: NZ_CP028745 Location: 3835766..3908801 Organism: Escherichia coli strain A30 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY83_RS18200 (3831482) | 3831482..3832150 | + | 669 | WP_240767401.1 | protein YkgH | - |
| AOY83_RS18205 (3832393) | 3832393..3833088 | - | 696 | WP_000370398.1 | lactate utilization protein C | - |
| AOY83_RS18210 (3833081) | 3833081..3834508 | - | 1428 | WP_000023919.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| AOY83_RS18215 (3834519) | 3834519..3835238 | - | 720 | WP_001102100.1 | (Fe-S)-binding protein | - |
| AOY83_RS18220 (3835766) | 3835766..3836620 | - | 855 | WP_112044236.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| AOY83_RS18225 (3836846) | 3836846..3838171 | + | 1326 | WP_240767402.1 | reactive chlorine resistance oxidoreductase RclA | - |
| AOY83_RS18230 (3838280) | 3838280..3838516 | + | 237 | WP_000474077.1 | reactive chlorine resistance periplasmic protein RclB | - |
| AOY83_RS18235 (3838528) | 3838528..3839121 | + | 594 | WP_001306921.1 | reactive chlorine species resistance protein RclC | - |
| AOY83_RS18240 (3839281) | 3839281..3840150 | - | 870 | WP_001299025.1 | aldo/keto reductase | - |
| AOY83_RS18245 (3840397) | 3840397..3841254 | + | 858 | WP_240767403.1 | Right origin-binding protein | VF |
| AOY83_RS18250 (3841375) | 3841375..3845628 | - | 4254 | WP_240767404.1 | Invasin | VF |
| AOY83_RS18255 (3846194) | 3846194..3847045 | + | 852 | WP_001174461.1 | aldo/keto reductase | - |
| AOY83_RS18260 (3847072) | 3847072..3848061 | + | 990 | WP_089621570.1 | aldo/keto reductase | - |
| AOY83_RS18265 (3848093) | 3848093..3848986 | - | 894 | WP_122992187.1 | HTH-type transcriptional regulator PgrR | VF |
| AOY83_RS18270 (3849187) | 3849187..3850113 | - | 927 | WP_042100293.1 | HTH-type transcriptional regulator PgrR | VF |
| AOY83_RS18275 (3850270) | 3850270..3851190 | + | 921 | WP_000860021.1 | alpha/beta hydrolase | - |
| AOY83_RS18280 (3851435) | 3851435..3852577 | + | 1143 | WP_089621573.1 | NADH-dependent flavin oxidoreductase | - |
| AOY83_RS18285 (3853051) | 3853051..3853152 | + | 102 | WP_000662258.1 | small membrane protein YkgR | - |
| AOY83_RS18290 (3853515) | 3853515..3853778 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| AOY83_RS18295 (3853778) | 3853778..3853918 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| AOY83_RS18300 (3853988) | 3853988..3854179 | - | 192 | WP_001147284.1 | hypothetical protein | - |
| AOY83_RS18305 (3855003) | 3855003..3855545 | + | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| AOY83_RS18310 (3855620) | 3855620..3856207 | + | 588 | WP_000730968.1 | Common pilus major fimbrillin subunit EcpA | VF |
| AOY83_RS18315 (3856265) | 3856265..3856933 | + | 669 | WP_000716386.1 | putative fimbrial chaperone EcpB | VF |
| AOY83_RS18320 (3856959) | 3856959..3859484 | + | 2526 | WP_240767405.1 | putative outer membrane usher protein EcpC | VF |
| AOY83_RS18325 (3859474) | 3859474..3861117 | + | 1644 | WP_001265653.1 | Fimbria adhesin EcpD | VF |
| AOY83_RS18330 (3861086) | 3861086..3861796 | + | 711 | WP_012000924.1 | putative fimbrial chaperone EcpE | VF |
| AOY83_RS18335 (3862109) | 3862109..3862438 | + | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| AOY83_RS18340 (3862685) | 3862685..3863299 | - | 615 | WP_001019920.1 | YagU family protein | - |
| AOY83_RS18345 (3863717) | 3863717..3864406 | + | 690 | WP_047082179.1 | aldehyde dehydrogenase iron-sulfur subunit PaoA | - |
| AOY83_RS18350 (3864403) | 3864403..3865359 | + | 957 | WP_089621577.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
| AOY83_RS18355 (3865356) | 3865356..3867554 | + | 2199 | WP_089621578.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| AOY83_RS18360 (3867564) | 3867564..3868574 | + | 1011 | WP_240767406.1 | molybdenum cofactor insertion chaperone PaoD | - |
| AOY83_RS18365 (3868700) | 3868700..3869827 | - | 1128 | WP_240767936.1 | MFS transporter | - |
| AOY83_RS18370 (3869969) | 3869969..3871027 | - | 1059 | WP_240767407.1 | alpha/beta hydrolase | - |
| AOY83_RS18375 (3871273) | 3871273..3872175 | + | 903 | WP_140415010.1 | HTH-type transcriptional regulator PgrR | VF |
| AOY83_RS18380 (3872886) | 3872886..3873161 | - | 276 | WP_024248231.1 | hypothetical protein | - |
| AOY83_RS18385 (3873325) | 3873325..3874047 | - | 723 | WP_047670827.1 | putative oxidoreductase | VF |
| AOY83_RS18390 (3874146) | 3874146..3875045 | + | 900 | WP_240767408.1 | HTH-type transcriptional regulator PgrR | VF |
| AOY83_RS18400 (3875362) | 3875362..3876615 | - | 1254 | WP_240767409.1 | glutamate-5-semialdehyde dehydrogenase | - |
| AOY83_RS18405 (3876627) | 3876627..3877730 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| AOY83_RS18410 (3878018) | 3878018..3879073 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| AOY83_RS18415 (3879112) | 3879112..3879513 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3880231) | 3880231..3880311 | - | 81 | NuclAT_12 | - | - |
| - (3880231) | 3880231..3880311 | - | 81 | NuclAT_12 | - | - |
| - (3880231) | 3880231..3880311 | - | 81 | NuclAT_12 | - | - |
| - (3880231) | 3880231..3880311 | - | 81 | NuclAT_12 | - | - |
| AOY83_RS18420 (3879571) | 3879571..3880815 | - | 1245 | WP_000189542.1 | esterase FrsA | - |
| AOY83_RS18425 (3880907) | 3880907..3881365 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| AOY83_RS18430 (3881626) | 3881626..3883083 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| AOY83_RS18435 (3883140) | 3883140..3883661 | - | 522 | Protein_3625 | peptide chain release factor H | - |
| AOY83_RS18440 (3883660) | 3883660..3883863 | - | 204 | Protein_3626 | RtcB family protein | - |
| AOY83_RS18445 (3884181) | 3884181..3884633 | - | 453 | WP_130209683.1 | GNAT family N-acetyltransferase | - |
| AOY83_RS18450 (3884643) | 3884643..3885041 | - | 399 | WP_001263495.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| AOY83_RS18455 (3885044) | 3885044..3885337 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| AOY83_RS18460 (3885389) | 3885389..3886444 | - | 1056 | WP_001226161.1 | DNA polymerase IV | - |
| AOY83_RS18465 (3886515) | 3886515..3887300 | - | 786 | WP_000207556.1 | Chemotaxis protein LafU | VF |
| AOY83_RS18470 (3887272) | 3887272..3888984 | + | 1713 | Protein_3632 | Flagellar biosynthesis protein FlhA | VF |
| AOY83_RS18475 (3889107) | 3889107..3889604 | - | 498 | WP_240767410.1 | REP-associated tyrosine transposase RayT | - |
| AOY83_RS18480 (3889780) | 3889780..3890529 | - | 750 | WP_047625031.1 | Murein DD-endopeptidase MepH | VF |
| AOY83_RS18485 (3890739) | 3890739..3890999 | + | 261 | WP_000729709.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| AOY83_RS18490 (3891002) | 3891002..3891280 | + | 279 | WP_000615977.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| AOY83_RS18495 (3891436) | 3891436..3892176 | + | 741 | WP_240767411.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| AOY83_RS18500 (3892147) | 3892147..3892914 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| AOY83_RS18505 (3893120) | 3893120..3893698 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| AOY83_RS18510 (3893938) | 3893938..3896382 | + | 2445 | WP_240767412.1 | Acyl-coenzyme A dehydrogenase | VF |
| AOY83_RS18515 (3896425) | 3896425..3896871 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| AOY83_RS18520 (3897052) | 3897052..3897822 | + | 771 | WP_001118041.1 | 2-oxoglutaramate amidase | - |
| AOY83_RS18525 (3897876) | 3897876..3898082 | - | 207 | Protein_3643 | ISAs1 family transposase | - |
| AOY83_RS18530 (3898093) | 3898093..3898581 | - | 489 | WP_123060080.1 | integrating conjugative element protein | - |
| AOY83_RS18535 (3898672) | 3898672..3899175 | - | 504 | WP_039021143.1 | hypothetical protein | - |
| AOY83_RS18540 (3899404) | 3899404..3900167 | - | 764 | Protein_3646 | ISAs1 family transposase | - |
| AOY83_RS18545 (3900425) | 3900425..3902518 | - | 2094 | WP_240767413.1 | hypothetical protein | VF |
| AOY83_RS18550 (3902503) | 3902503..3903027 | - | 525 | WP_077782897.1 | hypothetical protein | VF |
| AOY83_RS18555 (3903371) | 3903371..3904135 | - | 765 | WP_047624960.1 | DUF4123 domain-containing protein | - |
| AOY83_RS18560 (3904148) | 3904148..3904492 | - | 345 | Protein_3650 | type VI secretion system tip protein VgrG | - |
| AOY83_RS18565 (3904636) | 3904636..3905475 | - | 840 | WP_105458168.1 | hypothetical protein | - |
| AOY83_RS18570 (3905477) | 3905477..3906280 | - | 804 | WP_047624962.1 | peptidase M35 | - |
| AOY83_RS18575 (3906267) | 3906267..3908666 | - | 2400 | WP_240767414.1 | Actin cross-linking toxin VgrG1 | VF |
| AOY83_RS18580 (3908887) | 3908887..3909405 | - | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| AOY83_RS18585 (3910108) | 3910108..3910611 | + | 504 | WP_000041479.1 | type VI secretion system contractile sheath small subunit | - |
| AOY83_RS18590 (3910634) | 3910634..3912118 | + | 1485 | WP_240767415.1 | type VI secretion system contractile sheath large subunit | - |
| AOY83_RS18595 (3912123) | 3912123..3912548 | + | 426 | WP_001189668.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|