MGE detailed information
MGE type: Genomic_island MGE length: 76919 bp
Accession: NZ_CP028744 Location: 435244..512162 Organism: Escherichia coli strain A31 Replicon: chromosome
Accession: NZ_CP028744 Location: 435244..512162 Organism: Escherichia coli strain A31 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY84_RS01950 (430426) | 430426..431766 | - | 1341 | WP_000899522.1 | anaerobic C4-dicarboxylate transporter DcuB | - |
| AOY84_RS01955 (432337) | 432337..433056 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| AOY84_RS01960 (433053) | 433053..434684 | - | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| AOY84_RS01965 (434813) | 434813..435564 | - | 752 | Protein_367 | IS3 family transposase | - |
| AOY84_RS01970 (435967) | 435967..436539 | + | 573 | WP_000661408.1 | hypothetical protein | - |
| AOY84_RS01975 (436578) | 436578..437798 | + | 1221 | WP_001150579.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| AOY84_RS01980 (437890) | 437890..438315 | + | 426 | WP_240754949.1 | cysteine peptidase family C39 domain-containing protein | - |
| AOY84_RS01985 (438393) | 438393..439952 | + | 1560 | WP_240754950.1 | ABC transporter transmembrane domain-containing protein | - |
| AOY84_RS01990 (440082) | 440082..440810 | - | 729 | Protein_372 | helix-turn-helix domain-containing protein | - |
| AOY84_RS01995 (440890) | 440890..441408 | - | 519 | WP_000565927.1 | hypothetical protein | - |
| AOY84_RS02000 (441401) | 441401..441844 | - | 444 | WP_000996600.1 | Methionine import ATP-binding protein MetN | VF |
| AOY84_RS02005 (441936) | 441936..442931 | - | 996 | WP_240755080.1 | fimbrial protein | - |
| AOY84_RS02010 (442951) | 442951..443652 | - | 702 | WP_000162908.1 | putative D-methionine-binding lipoprotein MetQ | VF |
| AOY84_RS02015 (443645) | 443645..446002 | - | 2358 | WP_137415398.1 | N-acetylmuramoyl-L-alanine amidase sle1 | VF |
| AOY84_RS02020 (446071) | 446071..446604 | - | 534 | WP_000733565.1 | hypothetical protein | VF |
| AOY84_RS02025 (446954) | 446954..450790 | + | 3837 | WP_039264333.1 | hypothetical protein | VF |
| AOY84_RS02030 (451697) | 451697..452527 | + | 831 | WP_001088100.1 | AraC family transcriptional regulator | - |
| AOY84_RS02035 (453688) | 453688..457617 | + | 3930 | WP_001542592.1 | hypothetical protein | VF |
| AOY84_RS02040 (457830) | 457830..458102 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| AOY84_RS02045 (458329) | 458329..458625 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| AOY84_RS02050 (458653) | 458653..458826 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| AOY84_RS02055 (458945) | 458945..460462 | - | 1518 | WP_001295087.1 | lysine--tRNA ligase | - |
| AOY84_RS02060 (460699) | 460699..462156 | - | 1458 | WP_073535117.1 | dipeptide/tripeptide permease DtpC | - |
| AOY84_RS02065 (462215) | 462215..464362 | - | 2148 | WP_001100642.1 | lysine decarboxylase CadA | - |
| AOY84_RS02070 (464442) | 464442..465776 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| AOY84_RS02075 (466142) | 466142..467680 | - | 1539 | WP_001187182.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| AOY84_RS02080 (468563) | 468563..468889 | - | 327 | WP_000779482.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AOY84_RS02085 (468886) | 468886..469149 | - | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| AOY84_RS02090 (469221) | 469221..470087 | - | 867 | WP_240754951.1 | DUF4942 domain-containing protein | - |
| AOY84_RS02095 (470172) | 470172..470369 | - | 198 | WP_021531598.1 | DUF957 domain-containing protein | - |
| AOY84_RS02100 (470381) | 470381..470869 | - | 489 | WP_000761678.1 | DUF5983 family protein | - |
| AOY84_RS02105 (470866) | 470866..471243 | - | 378 | WP_240754952.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| AOY84_RS02110 (471333) | 471333..471701 | - | 369 | WP_240754953.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| AOY84_RS02115 (471751) | 471751..472395 | - | 645 | WP_240754954.1 | antitoxin of toxin-antitoxin stability system | - |
| AOY84_RS02120 (472414) | 472414..472635 | - | 222 | WP_000692315.1 | DUF987 domain-containing protein | - |
| AOY84_RS02125 (472698) | 472698..473174 | - | 477 | WP_240754955.1 | RadC family protein | - |
| AOY84_RS02130 (473190) | 473190..473675 | - | 486 | WP_240754956.1 | antirestriction protein | - |
| AOY84_RS02135 (473752) | 473752..474570 | - | 819 | WP_240754957.1 | DUF932 domain-containing protein | - |
| AOY84_RS02140 (474660) | 474660..474893 | - | 234 | WP_097456906.1 | DUF905 family protein | - |
| AOY84_RS02145 (474899) | 474899..475576 | - | 678 | WP_240754958.1 | hypothetical protein | - |
| AOY84_RS02150 (475696) | 475696..476580 | - | 885 | WP_240754959.1 | YfjP family GTPase | - |
| AOY84_RS02155 (476765) | 476765..477895 | + | 1131 | WP_127678762.1 | hypothetical protein | - |
| AOY84_RS02160 (479393) | 479393..480124 | + | 732 | WP_240754960.1 | inovirus Gp2 family protein | - |
| AOY84_RS02165 (480452) | 480452..481330 | + | 879 | WP_127678764.1 | restriction endonuclease | - |
| AOY84_RS02170 (481387) | 481387..481937 | + | 551 | Protein_408 | transposase | - |
| AOY84_RS02175 (482096) | 482096..482871 | - | 776 | Protein_409 | transposase | - |
| AOY84_RS02180 (483182) | 483182..483532 | + | 351 | WP_240754961.1 | H-NS family nucleoid-associated regulatory protein | - |
| AOY84_RS02185 (483800) | 483800..483928 | + | 129 | Protein_411 | IS256 family transposase | - |
| AOY84_RS02190 (483960) | 483960..484588 | - | 629 | Protein_412 | IS21 family transposase IS21 | Transposase |
| AOY84_RS02195 (485774) | 485774..486340 | + | 567 | WP_240754962.1 | inovirus-type Gp2 protein | - |
| AOY84_RS02200 (486587) | 486587..487159 | + | 573 | WP_240754963.1 | hypothetical protein | - |
| AOY84_RS02205 (487228) | 487228..487464 | + | 237 | WP_000958091.1 | AlpA family transcriptional regulator | - |
| AOY84_RS02210 (487733) | 487733..488233 | + | 501 | WP_240754964.1 | hypothetical protein | - |
| AOY84_RS02215 (488322) | 488322..488536 | + | 215 | Protein_417 | DNA-binding protein | - |
| AOY84_RS02220 (488767) | 488767..488973 | - | 207 | WP_240754965.1 | Hypoxanthine-guanine phosphoribosyltransferase | VF |
| AOY84_RS02225 (489545) | 489545..489844 | + | 300 | WP_240754966.1 | 33 kDa chaperonin | VF |
| AOY84_RS02230 (489852) | 489852..490394 | + | 543 | WP_089592655.1 | Cysteine synthase | VF |
| AOY84_RS02235 (490403) | 490403..492853 | + | 2451 | WP_240754967.1 | Dihydropteroate synthase | VF |
| AOY84_RS02240 (492846) | 492846..493646 | + | 801 | WP_105490215.1 | Dihydroneopterin aldolase | VF |
| AOY84_RS02245 (493681) | 493681..494172 | + | 492 | WP_240754968.1 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | VF |
| AOY84_RS02250 (494425) | 494425..495282 | + | 858 | WP_240754969.1 | Lysine--tRNA ligase | VF |
| AOY84_RS02255 (495453) | 495453..496250 | + | 798 | WP_240754970.1 | HTH-type transcriptional regulatory protein GabR | VF |
| AOY84_RS02260 (496281) | 496281..497045 | + | 765 | WP_240754971.1 | Pyridoxal 5'-phosphate synthase subunit PdxS | VF |
| AOY84_RS02265 (497062) | 497062..497835 | + | 774 | WP_240754972.1 | Pyridoxal 5'-phosphate synthase subunit PdxT | VF |
| AOY84_RS23325 (497835) | 497835..497957 | + | 123 | WP_276323649.1 | hypothetical protein | - |
| AOY84_RS02270 (497909) | 497909..498550 | + | 642 | WP_089592649.1 | hypothetical protein | - |
| AOY84_RS02275 (498540) | 498540..499298 | + | 759 | WP_240754973.1 | Protein-arginine kinase activator protein | VF |
| AOY84_RS02280 (499707) | 499707..500591 | + | 885 | WP_240754974.1 | fimbrial | - |
| AOY84_RS02285 (500629) | 500629..504555 | + | 3927 | WP_240754975.1 | DNA repair protein RadA | VF |
| AOY84_RS02290 (504815) | 504815..505276 | + | 462 | WP_240754976.1 | hypothetical protein | - |
| AOY84_RS02295 (505273) | 505273..506871 | + | 1599 | WP_240754977.1 | hypothetical protein | - |
| AOY84_RS02300 (507088) | 507088..507465 | - | 378 | Protein_435 | IS256 family transposase IS1414 | Transposase |
| AOY84_RS02305 (507356) | 507356..507601 | - | 246 | WP_240754978.1 | IS256 family transposase IS1414 | Transposase |
| AOY84_RS02310 (507881) | 507881..508627 | - | 747 | WP_240754979.1 | MipA/OmpV family protein | - |
| AOY84_RS02315 (509083) | 509083..509928 | + | 846 | WP_240754980.1 | AraC family transcriptional regulator | - |
| AOY84_RS02320 (510229) | 510229..510528 | + | 300 | WP_240754981.1 | hypothetical protein | - |
| AOY84_RS02325 (510897) | 510897..512162 | - | 1266 | WP_240754982.1 | MASE4 domain-containing protein | - |
| AOY84_RS02330 (512481) | 512481..513497 | - | 1017 | WP_138159241.1 | sulfite reductase subunit C | - |
| AOY84_RS02335 (513508) | 513508..514326 | - | 819 | WP_240754983.1 | anaerobic sulfite reductase subunit AsrB | - |
| AOY84_RS02340 (514330) | 514330..515373 | - | 1044 | WP_240754984.1 | anaerobic sulfite reductase subunit AsrA | - |
| AOY84_RS02345 (515772) | 515772..516395 | + | 624 | WP_135524162.1 | DNA-binding protein | - |
| AOY84_RS02350 (516491) | 516491..516724 | + | 234 | WP_135521050.1 | hypothetical protein | - |
| AOY84_RS02355 (516741) | 516741..516968 | - | 228 | WP_240754985.1 | DUF4222 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|