MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 163375 bp
Accession: NZ_CP028735 Location: 4147985..4311359 Organism: Escherichia coli strain A41 Replicon: chromosome
Accession: NZ_CP028735 Location: 4147985..4311359 Organism: Escherichia coli strain A41 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY94_RS20175 (4144417) | 4144417..4145460 | + | 1044 | WP_240764394.1 | tetratricopeptide repeat protein | - |
| AOY94_RS20180 (4145602) | 4145602..4147275 | - | 1674 | WP_240764395.1 | sulfatase-like hydrolase/transferase | - |
| AOY94_RS20185 (4147678) | 4147678..4147944 | - | 267 | WP_000766272.1 | YkgJ family cysteine cluster protein | - |
| AOY94_RS20190 (4147941) | 4147941..4149512 | - | 1572 | WP_240764396.1 | cobalamin adenosyltransferase | - |
| AOY94_RS20195 (4149559) | 4149559..4150638 | - | 1080 | WP_201489479.1 | chemotaxis protein | - |
| AOY94_RS20200 (4150687) | 4150687..4151583 | - | 897 | WP_240764397.1 | WYL domain-containing protein | - |
| AOY94_RS20205 (4152006) | 4152006..4152743 | - | 738 | WP_201489481.1 | OmpW family outer membrane protein | - |
| AOY94_RS20210 (4153062) | 4153062..4153523 | + | 462 | WP_240764398.1 | H-NS family nucleoid-associated regulatory protein | - |
| AOY94_RS20215 (4153798) | 4153798..4153980 | + | 183 | Protein_3951 | IS66 family transposase | - |
| AOY94_RS20220 (4154085) | 4154085..4154437 | - | 353 | Protein_3952 | IS66 family transposase ISEc23 | Transposase |
| AOY94_RS20225 (4154434) | 4154434..4154592 | - | 159 | WP_240764399.1 | hypothetical protein | - |
| AOY94_RS20230 (4155493) | 4155493..4158645 | - | 3153 | WP_170972481.1 | N-6 DNA methylase | - |
| AOY94_RS20235 (4158635) | 4158635..4159693 | - | 1059 | WP_033802312.1 | DNA cytosine methyltransferase | - |
| AOY94_RS20240 (4159693) | 4159693..4160910 | - | 1218 | WP_033802311.1 | DNA cytosine methyltransferase | - |
| AOY94_RS20245 (4161237) | 4161237..4161641 | - | 405 | WP_240764400.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| AOY94_RS20250 (4161651) | 4161651..4162178 | - | 528 | WP_240764401.1 | hypothetical protein | - |
| AOY94_RS20255 (4162162) | 4162162..4163526 | - | 1365 | WP_240764402.1 | VasL domain-containing protein | - |
| AOY94_RS20260 (4163581) | 4163581..4163886 | - | 306 | WP_240764403.1 | hypothetical protein | - |
| AOY94_RS20265 (4163952) | 4163952..4165697 | - | 1746 | WP_240764404.1 | 3'-5' exonuclease | - |
| AOY94_RS20270 (4165763) | 4165763..4167301 | - | 1539 | WP_201489485.1 | IS66 family transposase ISKpn24 | Transposase |
| AOY94_RS20275 (4167350) | 4167350..4167697 | - | 348 | WP_201489486.1 | IS66 family transposase ISKpn24 | Transposase |
| AOY94_RS20280 (4167694) | 4167694..4168098 | - | 405 | WP_201489487.1 | IS66 family transposase ISKpn24 | Transposase |
| AOY94_RS20285 (4168564) | 4168564..4170174 | - | 1611 | WP_201489500.1 | hypothetical protein | VF |
| AOY94_RS20290 (4170650) | 4170650..4171225 | - | 576 | WP_201489488.1 | Attachment invasion locus protein | VF |
| AOY94_RS20295 (4171359) | 4171359..4171808 | - | 450 | WP_201489501.1 | hypothetical protein | VF |
| AOY94_RS20300 (4171811) | 4171811..4172356 | - | 546 | WP_201489489.1 | hypothetical protein | VF |
| AOY94_RS20305 (4172334) | 4172334..4173419 | - | 1086 | WP_240764405.1 | hypothetical protein | VF |
| AOY94_RS20310 (4173383) | 4173383..4175137 | - | 1755 | WP_201489491.1 | hypothetical protein | VF |
| AOY94_RS20315 (4175523) | 4175523..4178954 | - | 3432 | WP_240764406.1 | hypothetical protein | VF |
| AOY94_RS20320 (4178938) | 4178938..4179969 | - | 1032 | WP_240764407.1 | hypothetical protein | - |
| AOY94_RS20325 (4180071) | 4180071..4180328 | - | 258 | WP_201489494.1 | hypothetical protein | VF |
| AOY94_RS20330 (4180345) | 4180345..4182798 | - | 2454 | WP_240764408.1 | hypothetical protein | VF |
| AOY94_RS20335 (4182786) | 4182786..4183298 | - | 513 | WP_201489496.1 | hypothetical protein | VF |
| AOY94_RS20340 (4183385) | 4183385..4184173 | - | 789 | WP_240764409.1 | DUF4123 domain-containing protein | - |
| AOY94_RS20345 (4184174) | 4184174..4186552 | - | 2379 | WP_240764410.1 | Actin cross-linking toxin VgrG1 | VF |
| AOY94_RS20350 (4186549) | 4186549..4189212 | - | 2664 | WP_240764411.1 | Protein ClpV1 | VF |
| AOY94_RS20355 (4189381) | 4189381..4189872 | - | 492 | WP_001007315.1 | Major exported protein | VF |
| AOY94_RS20360 (4189878) | 4189878..4191590 | - | 1713 | WP_240764412.1 | Outer membrane porin F | VF |
| AOY94_RS20365 (4191587) | 4191587..4192270 | - | 684 | WP_201489648.1 | hypothetical protein | VF |
| AOY94_RS20370 (4192267) | 4192267..4193610 | - | 1344 | WP_240764621.1 | hypothetical protein | VF |
| AOY94_RS20375 (4193626) | 4193626..4195170 | - | 1545 | WP_201489649.1 | hypothetical protein | VF |
| AOY94_RS20380 (4195192) | 4195192..4195689 | - | 498 | WP_001559830.1 | hypothetical protein | VF |
| AOY94_RS20385 (4196196) | 4196196..4196387 | + | 192 | WP_001287884.1 | DUF4222 domain-containing protein | - |
| AOY94_RS20390 (4196440) | 4196440..4196673 | - | 234 | WP_000124171.1 | hypothetical protein | - |
| AOY94_RS20395 (4197020) | 4197020..4197505 | + | 486 | WP_000896657.1 | CaiF/GrlA family transcriptional regulator | - |
| AOY94_RS20400 (4197812) | 4197812..4198342 | - | 531 | WP_089573890.1 | OmpH family outer membrane protein | - |
| AOY94_RS20405 (4198390) | 4198390..4206332 | - | 7943 | Protein_3989 | Outer membrane protein IcsA autotransporter | VF |
| AOY94_RS20410 (4206363) | 4206363..4206995 | - | 633 | WP_096931250.1 | helix-turn-helix transcriptional regulator | - |
| AOY94_RS20415 (4207624) | 4207624..4208391 | - | 768 | WP_240764413.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| AOY94_RS20420 (4208598) | 4208598..4208978 | - | 381 | WP_240764414.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| AOY94_RS20425 (4209080) | 4209080..4213036 | - | 3957 | WP_240764415.1 | Outer membrane protein IcsA autotransporter | VF |
| AOY94_RS20430 (4214625) | 4214625..4215528 | + | 904 | Protein_3994 | IS3 family transposase | - |
| AOY94_RS20435 (4215810) | 4215810..4216886 | + | 1077 | WP_240764416.1 | IS110 family transposase ISEc21 | Transposase |
| AOY94_RS20440 (4216903) | 4216903..4217211 | + | 309 | Protein_3996 | integrase core domain-containing protein | - |
| AOY94_RS20445 (4217450) | 4217450..4218495 | + | 1046 | Protein_3997 | anaerobic sulfite reductase subunit AsrA | - |
| AOY94_RS20450 (4218499) | 4218499..4219317 | + | 819 | WP_053289203.1 | anaerobic sulfite reductase subunit AsrB | - |
| AOY94_RS20455 (4219328) | 4219328..4220338 | + | 1011 | WP_106425588.1 | sulfite reductase subunit C | - |
| AOY94_RS20460 (4220488) | 4220488..4220895 | - | 408 | WP_240764417.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| AOY94_RS20465 (4221350) | 4221350..4223869 | - | 2520 | Protein_4001 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| AOY94_RS20470 (4223982) | 4223982..4224146 | - | 165 | WP_240764418.1 | hypothetical protein | - |
| AOY94_RS20475 (4224165) | 4224165..4224524 | - | 360 | WP_240764419.1 | hypothetical protein | VF |
| AOY94_RS20480 (4224931) | 4224931..4225689 | - | 759 | WP_240764420.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| AOY94_RS20485 (4225679) | 4225679..4226320 | - | 642 | WP_137495761.1 | hypothetical protein | - |
| AOY94_RS25010 (4226272) | 4226272..4226394 | - | 123 | WP_256112207.1 | hypothetical protein | - |
| AOY94_RS20490 (4226394) | 4226394..4227167 | - | 774 | WP_240764421.1 | hypothetical protein | VF |
| AOY94_RS20495 (4227184) | 4227184..4227948 | - | 765 | WP_240764422.1 | hypothetical protein | VF |
| AOY94_RS20500 (4227979) | 4227979..4228776 | - | 798 | WP_240764423.1 | hypothetical protein | VF |
| AOY94_RS20505 (4228947) | 4228947..4229801 | - | 855 | WP_240764424.1 | K88 fimbrial protein AB | VF |
| AOY94_RS20510 (4230040) | 4230040..4230531 | - | 492 | WP_033556648.1 | hypothetical protein | VF |
| AOY94_RS20515 (4230566) | 4230566..4231375 | - | 810 | WP_240764425.1 | Chaperone protein FaeE | VF |
| AOY94_RS20520 (4231368) | 4231368..4233770 | - | 2403 | WP_240764426.1 | Outer membrane usher protein YraJ | VF |
| AOY94_RS20525 (4233827) | 4233827..4234369 | - | 543 | WP_240764427.1 | hypothetical protein | VF |
| AOY94_RS20530 (4234377) | 4234377..4234676 | - | 300 | WP_001088797.1 | Major pilu subunit operon regulatory protein PapB | VF |
| AOY94_RS20535 (4235248) | 4235248..4235454 | + | 207 | WP_240764428.1 | P fimbrial regulatory protein KS71A | VF |
| AOY94_RS20540 (4236140) | 4236140..4236553 | - | 414 | WP_240764429.1 | zinc-ribbon domain-containing protein | - |
| AOY94_RS20545 (4236550) | 4236550..4236933 | - | 384 | WP_042093266.1 | putative zinc ribbon protein | - |
| AOY94_RS20550 (4237100) | 4237100..4237669 | - | 570 | WP_240764430.1 | inovirus Gp2 family protein | - |
| AOY94_RS20555 (4238285) | 4238285..4238497 | - | 213 | WP_032176813.1 | hemolysin expression modulator Hha | - |
| AOY94_RS20560 (4239197) | 4239197..4239403 | + | 207 | WP_001095912.1 | AlpA family transcriptional regulator | - |
| AOY94_RS20565 (4239489) | 4239489..4240061 | + | 573 | WP_021564615.1 | hypothetical protein | - |
| AOY94_RS20570 (4240279) | 4240279..4240359 | + | 81 | Protein_4023 | IS1 family transposase | - |
| AOY94_RS20575 (4241557) | 4241557..4242576 | + | 1020 | WP_196252902.1 | transcriptional regulator | - |
| AOY94_RS20580 (4242686) | 4242686..4243558 | + | 873 | WP_240764431.1 | GTPase family protein | - |
| AOY94_RS20585 (4243930) | 4243930..4246776 | + | 2847 | WP_240764432.1 | Ag43/Cah family autotransporter adhesin | - |
| AOY94_RS20590 (4246847) | 4246847..4247060 | + | 214 | Protein_4027 | DUF905 family protein | - |
| AOY94_RS20595 (4247151) | 4247151..4247969 | + | 819 | WP_240764433.1 | DUF932 domain-containing protein | - |
| AOY94_RS20600 (4248061) | 4248061..4248546 | + | 486 | WP_053289216.1 | antirestriction protein | - |
| AOY94_RS20605 (4248562) | 4248562..4249038 | + | 477 | WP_240764434.1 | RadC family protein | - |
| AOY94_RS20610 (4249106) | 4249106..4249327 | + | 222 | WP_000692300.1 | DUF987 domain-containing protein | - |
| AOY94_RS20615 (4249406) | 4249406..4249774 | + | 369 | WP_096845217.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| AOY94_RS20620 (4249864) | 4249864..4250241 | + | 378 | WP_240764435.1 | TA system toxin CbtA family protein | Toxin Detail |
| AOY94_RS20625 (4250238) | 4250238..4250435 | + | 198 | Protein_4034 | DUF5983 family protein | - |
| AOY94_RS20630 (4250463) | 4250463..4250660 | + | 198 | WP_105198716.1 | DUF957 domain-containing protein | - |
| AOY94_RS20635 (4250757) | 4250757..4251599 | + | 843 | WP_240764436.1 | DUF4942 domain-containing protein | - |
| AOY94_RS20640 (4251880) | 4251880..4252416 | - | 537 | WP_000942795.1 | Type II secretion system protein M | VF |
| AOY94_RS20645 (4252418) | 4252418..4253596 | - | 1179 | WP_000094971.1 | Type II secretion system protein L | VF |
| AOY94_RS20650 (4253593) | 4253593..4254570 | - | 978 | WP_000633238.1 | Putative type II secretion system protein K | VF |
| AOY94_RS20655 (4254573) | 4254573..4255172 | - | 600 | WP_001255040.1 | Type II secretion system protein J | VF |
| AOY94_RS20660 (4255169) | 4255169..4255540 | - | 372 | WP_000820125.1 | Type II secretion system protein I | VF |
| AOY94_RS20665 (4255537) | 4255537..4256100 | - | 564 | WP_001115140.1 | Type II secretion system protein H | VF |
| AOY94_RS20670 (4256104) | 4256104..4256559 | - | 456 | WP_001087296.1 | Type II secretion system protein G | VF |
| AOY94_RS20675 (4256576) | 4256576..4257799 | - | 1224 | WP_001173453.1 | Type II secretion system protein F | VF |
| AOY94_RS20680 (4257799) | 4257799..4259292 | - | 1494 | WP_000249348.1 | Type II secretion system protein E | VF |
| AOY94_RS20685 (4259292) | 4259292..4261352 | - | 2061 | WP_000498824.1 | Type II secretion system protein D | VF |
| AOY94_RS20690 (4261382) | 4261382..4262341 | - | 960 | WP_000135063.1 | Type II secretion system protein C | VF |
| AOY94_RS20695 (4262359) | 4262359..4262769 | - | 411 | WP_001324279.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| AOY94_RS20700 (4262835) | 4262835..4263644 | - | 810 | WP_001365924.1 | Leader peptidase PppA | VF |
| AOY94_RS20705 (4263784) | 4263784..4268352 | - | 4569 | WP_001034518.1 | hypothetical protein | VF |
| AOY94_RS20710 (4268838) | 4268838..4270520 | - | 1683 | WP_000259303.1 | glycolate permease GlcA | - |
| AOY94_RS20715 (4270876) | 4270876..4273047 | - | 2172 | WP_000084061.1 | malate synthase G | - |
| AOY94_RS20720 (4273069) | 4273069..4273473 | - | 405 | WP_000853256.1 | GlcG family protein | - |
| AOY94_RS20725 (4273478) | 4273478..4274701 | - | 1224 | WP_001194680.1 | glycolate oxidase subunit GlcF | - |
| AOY94_RS20730 (4274712) | 4274712..4275764 | - | 1053 | WP_000943059.1 | glycolate oxidase subunit GlcE | - |
| AOY94_RS20735 (4275764) | 4275764..4277263 | - | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| AOY94_RS20740 (4277514) | 4277514..4278278 | + | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| AOY94_RS20745 (4278285) | 4278285..4279427 | - | 1143 | WP_000388786.1 | protein YghO | - |
| AOY94_RS20750 (4279798) | 4279798..4281519 | + | 1722 | WP_012565169.1 | 4-hydroxyphenylalkanoate adenylyltransferase | VF |
| AOY94_RS20755 (4281516) | 4281516..4282430 | + | 915 | WP_001077144.1 | NAD-dependent epimerase/dehydratase family protein | - |
| AOY94_RS20760 (4282462) | 4282462..4282710 | + | 249 | WP_000248097.1 | acyl carrier protein | - |
| AOY94_RS20765 (4282710) | 4282710..4283882 | + | 1173 | WP_000524967.1 | 8-amino-7-oxononanoate synthase | VF |
| AOY94_RS20770 (4283917) | 4283917..4284996 | - | 1080 | WP_001349901.1 | LPS export ABC transporter permease LptG | - |
| AOY94_RS20775 (4284993) | 4284993..4286063 | - | 1071 | WP_000779654.1 | LPS export ABC transporter permease LptF | - |
| AOY94_RS20780 (4286094) | 4286094..4286654 | - | 561 | WP_001298770.1 | YtfJ family protein | - |
| AOY94_RS20785 (4286666) | 4286666..4287490 | - | 825 | WP_000984977.1 | hypothetical protein | - |
| AOY94_RS20790 (4287490) | 4287490..4288839 | - | 1350 | WP_000896880.1 | lipopolysaccharide biosynthesis protein | - |
| AOY94_RS20795 (4288885) | 4288885..4289643 | - | 759 | WP_000339532.1 | hypothetical protein | - |
| AOY94_RS20800 (4289675) | 4289675..4290388 | - | 714 | WP_240764437.1 | dTMP kinase | - |
| AOY94_RS20805 (4290562) | 4290562..4291254 | + | 693 | WP_240764438.1 | dTMP kinase | - |
| AOY94_RS20810 (4291308) | 4291308..4292807 | - | 1500 | WP_000933296.1 | inorganic phosphate transporter PitB | - |
| AOY94_RS20815 (4293099) | 4293099..4294958 | - | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| AOY94_RS20820 (4295163) | 4295163..4296029 | + | 867 | WP_001298746.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| AOY94_RS25015 (4296058) | 4296058..4296139 | - | 82 | Protein_4074 | hypothetical protein | - |
| AOY94_RS20825 (4296152) | 4296152..4296400 | - | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| AOY94_RS20830 (4296413) | 4296413..4296754 | - | 342 | WP_000544953.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| AOY94_RS20835 (4296747) | 4296747..4297235 | - | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| AOY94_RS20840 (4297228) | 4297228..4297722 | - | 495 | WP_001221954.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| AOY94_RS20845 (4297722) | 4297722..4299425 | - | 1704 | WP_000083065.1 | hydrogenase 2 large subunit | - |
| AOY94_RS20850 (4299422) | 4299422..4300600 | - | 1179 | WP_000017694.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| AOY94_RS20855 (4300590) | 4300590..4301576 | - | 987 | WP_001081870.1 | hydrogenase 2 operon protein HybA | - |
| AOY94_RS20860 (4301579) | 4301579..4302697 | - | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| AOY94_RS20865 (4302886) | 4302886..4303173 | - | 288 | WP_001059136.1 | DUF2623 family protein YghW | - |
| AOY94_RS20870 (4303292) | 4303292..4304179 | - | 888 | WP_001297303.1 | YghX family hydrolase | - |
| AOY94_RS20875 (4304336) | 4304336..4305376 | + | 1041 | WP_000262156.1 | L-glyceraldehyde 3-phosphate reductase | - |
| AOY94_RS20880 (4305416) | 4305416..4305910 | - | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| AOY94_RS20885 (4306101) | 4306101..4306985 | + | 885 | WP_000018760.1 | putative oxidoreductase YghA | VF |
| AOY94_RS20890 (4307257) | 4307257..4307682 | - | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| AOY94_RS20895 (4307689) | 4307689..4308423 | - | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| AOY94_RS20900 (4308675) | 4308675..4309862 | + | 1188 | WP_000763931.1 | cystathionine beta-lyase | - |
| AOY94_RS20905 (4310002) | 4310002..4310661 | + | 660 | WP_000268419.1 | DedA family general envelope maintenance protein YghB | - |
| AOY94_RS20910 (4310701) | 4310701..4311600 | - | 900 | WP_000817717.1 | DNA-binding transcriptional regulator YqhC | - |
| AOY94_RS20915 (4311794) | 4311794..4312957 | + | 1164 | WP_001058807.1 | alcohol dehydrogenase | - |
| AOY94_RS20920 (4313062) | 4313062..4313889 | + | 828 | WP_000013149.1 | 2,5-didehydrogluconate reductase DkgA | - |
| AOY94_RS20925 (4314089) | 4314089..4315015 | + | 927 | WP_000691598.1 | YbjP/YqhG family protein | - |
| AOY94_RS20930 (4315066) | 4315066..4315323 | + | 258 | WP_000848528.1 | lipoprotein YqhH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|